RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
TVP23C-209ENST00000583206 STRCQ7RTU9 1775 aa16.05■□□□□ 0.16
TVP23C-209ENST00000583206 SCAPERQ9BY12 1400 aa16.05■□□□□ 0.16
TVP23C-209ENST00000583206 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
TVP23C-209ENST00000583206 ATP10AO60312 1499 aa16.04■□□□□ 0.16
TVP23C-209ENST00000583206 PLCH2O75038 1416 aa16.03■□□□□ 0.16
TVP23C-209ENST00000583206 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
TVP23C-209ENST00000583206 CFAP74Q9C0B2 1584 aa16.03■□□□□ 0.16
TVP23C-209ENST00000583206 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
TVP23C-209ENST00000583206 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
TVP23C-209ENST00000583206 C9orf84Q5VXU9 1444 aa16■□□□□ 0.15
TVP23C-209ENST00000583206 PTPRTO14522 1441 aa15.98■□□□□ 0.15
TVP23C-209ENST00000583206 LTBP4Q8N2S1 1624 aa15.96■□□□□ 0.15
TVP23C-209ENST00000583206 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.14
TVP23C-209ENST00000583206 UHRF1BP1Q6BDS2 1440 aa15.95■□□□□ 0.14
TVP23C-209ENST00000583206 SETD1BQ9UPS6 1966 aaKnown RBP15.95■□□□□ 0.14
TVP23C-209ENST00000583206 EFCAB2Q5VUJ9 269 aa15.95■□□□□ 0.14
TVP23C-209ENST00000583206 AFAP1Q8N556 730 aa15.95■□□□□ 0.14
TVP23C-209ENST00000583206 CDK13Q14004 1512 aaKnown RBP15.94■□□□□ 0.14
TVP23C-209ENST00000583206 IQSEC2Q5JU85 1478 aa15.9■□□□□ 0.14
TVP23C-209ENST00000583206 KDM5CP41229 1560 aa15.88■□□□□ 0.13
TVP23C-209ENST00000583206 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
TVP23C-209ENST00000583206 ZNF518AQ6AHZ1 1483 aa15.88■□□□□ 0.13
TVP23C-209ENST00000583206 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
TVP23C-209ENST00000583206 REREQ9P2R6 1566 aa15.86■□□□□ 0.13
TVP23C-209ENST00000583206 DIP2CQ9Y2E4 1556 aa15.85■□□□□ 0.13
TVP23C-209ENST00000583206 C3P01024 1663 aa15.85■□□□□ 0.13
TVP23C-209ENST00000583206 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
TVP23C-209ENST00000583206 AGLP35573 1532 aa15.84■□□□□ 0.13
TVP23C-209ENST00000583206 EEA1Q15075 1411 aa15.82■□□□□ 0.12
TVP23C-209ENST00000583206 KIF14Q15058 1648 aa15.82■□□□□ 0.12
TVP23C-209ENST00000583206 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
TVP23C-209ENST00000583206 TROQ12816 1431 aaPredicted RBP15.8■□□□□ 0.12
TVP23C-209ENST00000583206 CDK11AQ9UQ88 783 aaPredicted RBP15.8■□□□□ 0.12
TVP23C-209ENST00000583206 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
TVP23C-209ENST00000583206 ZNF335Q9H4Z2 1342 aaPredicted RBP15.79■□□□□ 0.12
TVP23C-209ENST00000583206 NCKAP5LQ9HCH0 1330 aa15.79■□□□□ 0.12
TVP23C-209ENST00000583206 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
TVP23C-209ENST00000583206 UBAP1LF5GYI3 381 aa15.78■□□□□ 0.12
TVP23C-209ENST00000583206 ATP1B4Q9UN42 357 aaPredicted RBP15.78■□□□□ 0.12
TVP23C-209ENST00000583206 MYT1LQ9UL68 1186 aa15.77■□□□□ 0.12
TVP23C-209ENST00000583206 NPATQ14207 1427 aa15.77■□□□□ 0.11
TVP23C-209ENST00000583206 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.11
TVP23C-209ENST00000583206 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
TVP23C-209ENST00000583206 ESF1Q9H501 851 aaKnown RBP15.76■□□□□ 0.11
TVP23C-209ENST00000583206 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
TVP23C-209ENST00000583206 ZMYM3Q14202 1370 aa15.75■□□□□ 0.11
TVP23C-209ENST00000583206 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
TVP23C-209ENST00000583206 CDC42BPBQ9Y5S2 1711 aa15.73■□□□□ 0.11
TVP23C-209ENST00000583206 ABCC1P33527 1531 aa15.72■□□□□ 0.11
TVP23C-209ENST00000583206 KIDINS220Q9ULH0 1771 aa15.72■□□□□ 0.11
TVP23C-209ENST00000583206 PKD2Q13563 968 aa15.71■□□□□ 0.11
TVP23C-209ENST00000583206 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
TVP23C-209ENST00000583206 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
TVP23C-209ENST00000583206 CLIP1P30622 1438 aa15.69■□□□□ 0.1
TVP23C-209ENST00000583206 HSPA1LP34931 641 aa15.69■□□□□ 0.1
TVP23C-209ENST00000583206 PTPRKQ15262 1439 aa15.68■□□□□ 0.1
TVP23C-209ENST00000583206 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
TVP23C-209ENST00000583206 MROH2AA6NES4 1674 aa15.66■□□□□ 0.1
TVP23C-209ENST00000583206 ITSN2Q9NZM3 1697 aa15.66■□□□□ 0.1
TVP23C-209ENST00000583206 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
TVP23C-209ENST00000583206 PREX2Q70Z35 1606 aa15.65■□□□□ 0.1
TVP23C-209ENST00000583206 SAMD9LQ8IVG5 1584 aa15.64■□□□□ 0.09
TVP23C-209ENST00000583206 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
TVP23C-209ENST00000583206 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
TVP23C-209ENST00000583206 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
TVP23C-209ENST00000583206 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
TVP23C-209ENST00000583206 CEP170BQ9Y4F5 1589 aaPredicted RBP15.62■□□□□ 0.09
TVP23C-209ENST00000583206 ZNF142P52746 1687 aaPredicted RBP15.61■□□□□ 0.09
TVP23C-209ENST00000583206 SPAG9O60271 1321 aaKnown RBP15.61■□□□□ 0.09
TVP23C-209ENST00000583206 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
TVP23C-209ENST00000583206 PLXNC1O60486 1568 aa15.59■□□□□ 0.09
TVP23C-209ENST00000583206 PIP4K2BP78356 416 aa15.59■□□□□ 0.09
TVP23C-209ENST00000583206 GPATCH8Q9UKJ3 1502 aaKnown RBP15.58■□□□□ 0.09
TVP23C-209ENST00000583206 CDC42BPAQ5VT25 1732 aa15.58■□□□□ 0.08
TVP23C-209ENST00000583206 TOM1O60784 492 aa15.58■□□□□ 0.08
TVP23C-209ENST00000583206 GGT6Q6P531 493 aa15.58■□□□□ 0.08
TVP23C-209ENST00000583206 ZNF777Q9ULD5 760 aaPredicted RBP15.58■□□□□ 0.08
TVP23C-209ENST00000583206 CASKIN1Q8WXD9 1431 aa15.58■□□□□ 0.08
TVP23C-209ENST00000583206 CLTCQ00610 1675 aaKnown RBP15.57■□□□□ 0.08
TVP23C-209ENST00000583206 KIAA1107Q9UPP5 1409 aa15.57■□□□□ 0.08
TVP23C-209ENST00000583206 A2MP01023 1474 aa15.57■□□□□ 0.08
TVP23C-209ENST00000583206 SUPT6HQ7KZ85 1726 aaKnown RBP15.57■□□□□ 0.08
TVP23C-209ENST00000583206 A2ML1A8K2U0 1454 aa15.56■□□□□ 0.08
TVP23C-209ENST00000583206 SYCP2Q9BX26 1530 aa15.56■□□□□ 0.08
TVP23C-209ENST00000583206 ALKQ9UM73 1620 aa15.55■□□□□ 0.08
TVP23C-209ENST00000583206 SHANK2Q9UPX8 1470 aa15.55■□□□□ 0.08
TVP23C-209ENST00000583206 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
TVP23C-209ENST00000583206 CCDC18Q5T9S5 1454 aa15.54■□□□□ 0.08
TVP23C-209ENST00000583206 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
TVP23C-209ENST00000583206 CPS1P31327 1500 aa15.53■□□□□ 0.08
TVP23C-209ENST00000583206 ATP7AQ04656 1500 aa15.53■□□□□ 0.08
TVP23C-209ENST00000583206 NEURL4Q96JN8 1562 aa15.53■□□□□ 0.08
TVP23C-209ENST00000583206 FBXO31Q5XUX0 539 aaPredicted RBP15.52■□□□□ 0.08
TVP23C-209ENST00000583206 INO80Q9ULG1 1556 aaPredicted RBP15.52■□□□□ 0.07
TVP23C-209ENST00000583206 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
TVP23C-209ENST00000583206 CFDP1Q9UEE9 299 aaPredicted RBP15.49■□□□□ 0.07
TVP23C-209ENST00000583206 RGS17Q9UGC6 210 aaPredicted RBP15.49■□□□□ 0.07
TVP23C-209ENST00000583206 ZNF644Q9H582 1327 aaPredicted RBP15.47■□□□□ 0.07
TVP23C-209ENST00000583206 PLEKHH2Q8IVE3 1493 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms