RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
CDK5RAP3-226ENST00000583182 FER1L4A9Z1Z3 1794 aa24.63■■□□□ 1.53
CDK5RAP3-226ENST00000583182 MLECQ14165 292 aa24.63■■□□□ 1.53
CDK5RAP3-226ENST00000583182 MYO5CQ9NQX4 1742 aa24.63■■□□□ 1.53
CDK5RAP3-226ENST00000583182 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
CDK5RAP3-226ENST00000583182 FMN1Q68DA7 1419 aa24.61■■□□□ 1.53
CDK5RAP3-226ENST00000583182 ATP1B4Q9UN42 357 aaPredicted RBP24.61■■□□□ 1.53
CDK5RAP3-226ENST00000583182 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
CDK5RAP3-226ENST00000583182 KIF14Q15058 1648 aa24.6■■□□□ 1.53
CDK5RAP3-226ENST00000583182 ATP10AO60312 1499 aa24.58■■□□□ 1.52
CDK5RAP3-226ENST00000583182 EFCAB2Q5VUJ9 269 aa24.57■■□□□ 1.52
CDK5RAP3-226ENST00000583182 ARHGEF12Q9NZN5 1544 aa24.56■■□□□ 1.52
CDK5RAP3-226ENST00000583182 C9orf84Q5VXU9 1444 aa24.55■■□□□ 1.52
CDK5RAP3-226ENST00000583182 LRRIQ1Q96JM4 1722 aa24.54■■□□□ 1.52
CDK5RAP3-226ENST00000583182 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
CDK5RAP3-226ENST00000583182 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
CDK5RAP3-226ENST00000583182 ZNF518AQ6AHZ1 1483 aa24.5■■□□□ 1.51
CDK5RAP3-226ENST00000583182 ARHGAP5Q13017 1502 aa24.5■■□□□ 1.51
CDK5RAP3-226ENST00000583182 KDM5CP41229 1560 aa24.49■■□□□ 1.51
CDK5RAP3-226ENST00000583182 AFAP1Q8N556 730 aa24.47■■□□□ 1.51
CDK5RAP3-226ENST00000583182 PREX1Q8TCU6 1659 aa24.46■■□□□ 1.51
CDK5RAP3-226ENST00000583182 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
CDK5RAP3-226ENST00000583182 CLIP1P30622 1438 aa24.45■■□□□ 1.51
CDK5RAP3-226ENST00000583182 CDC42BPBQ9Y5S2 1711 aa24.45■■□□□ 1.5
CDK5RAP3-226ENST00000583182 DIP2CQ9Y2E4 1556 aa24.43■■□□□ 1.5
CDK5RAP3-226ENST00000583182 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
CDK5RAP3-226ENST00000583182 CERKQ8TCT0 537 aa24.42■■□□□ 1.5
CDK5RAP3-226ENST00000583182 ABCA6Q8N139 1617 aa24.4■■□□□ 1.5
CDK5RAP3-226ENST00000583182 REREQ9P2R6 1566 aa24.39■■□□□ 1.5
CDK5RAP3-226ENST00000583182 PREX2Q70Z35 1606 aa24.39■■□□□ 1.49
CDK5RAP3-226ENST00000583182 MYT1LQ9UL68 1186 aa24.38■■□□□ 1.49
CDK5RAP3-226ENST00000583182 MLH3Q9UHC1 1453 aa24.37■■□□□ 1.49
CDK5RAP3-226ENST00000583182 STRCQ7RTU9 1775 aa24.37■■□□□ 1.49
CDK5RAP3-226ENST00000583182 ABCC1P33527 1531 aa24.36■■□□□ 1.49
CDK5RAP3-226ENST00000583182 TRAPPC8Q9Y2L5 1435 aa24.35■■□□□ 1.49
CDK5RAP3-226ENST00000583182 SETD1BQ9UPS6 1966 aaKnown RBP24.34■■□□□ 1.49
CDK5RAP3-226ENST00000583182 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
CDK5RAP3-226ENST00000583182 CASKIN1Q8WXD9 1431 aa24.34■■□□□ 1.49
CDK5RAP3-226ENST00000583182 UHRF1BP1Q6BDS2 1440 aa24.33■■□□□ 1.49
CDK5RAP3-226ENST00000583182 C3P01024 1663 aa24.33■■□□□ 1.49
CDK5RAP3-226ENST00000583182 CCDC18Q5T9S5 1454 aa24.32■■□□□ 1.48
CDK5RAP3-226ENST00000583182 AGLP35573 1532 aa24.31■■□□□ 1.48
CDK5RAP3-226ENST00000583182 CDC42BPAQ5VT25 1732 aa24.31■■□□□ 1.48
CDK5RAP3-226ENST00000583182 KIDINS220Q9ULH0 1771 aa24.29■■□□□ 1.48
CDK5RAP3-226ENST00000583182 DMRT2Q9Y5R5 561 aa24.25■■□□□ 1.47
CDK5RAP3-226ENST00000583182 FYCO1Q9BQS8 1478 aa24.22■■□□□ 1.47
CDK5RAP3-226ENST00000583182 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
CDK5RAP3-226ENST00000583182 ESF1Q9H501 851 aaKnown RBP24.21■■□□□ 1.47
CDK5RAP3-226ENST00000583182 PTPRTO14522 1441 aa24.18■■□□□ 1.46
CDK5RAP3-226ENST00000583182 ZNF777Q9ULD5 760 aaPredicted RBP24.18■■□□□ 1.46
CDK5RAP3-226ENST00000583182 SYCP2Q9BX26 1530 aa24.18■■□□□ 1.46
CDK5RAP3-226ENST00000583182 CNTLNQ9NXG0 1405 aa24.18■■□□□ 1.46
CDK5RAP3-226ENST00000583182 GPATCH8Q9UKJ3 1502 aaKnown RBP24.17■■□□□ 1.46
CDK5RAP3-226ENST00000583182 MROH2AA6NES4 1674 aa24.14■■□□□ 1.45
CDK5RAP3-226ENST00000583182 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
CDK5RAP3-226ENST00000583182 HNRNPMP52272 730 aaKnown RBP eCLIP24.13■■□□□ 1.45
CDK5RAP3-226ENST00000583182 SPAG9O60271 1321 aaKnown RBP24.11■■□□□ 1.45
CDK5RAP3-226ENST00000583182 NCOA1Q15788 1441 aa24.11■■□□□ 1.45
CDK5RAP3-226ENST00000583182 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
CDK5RAP3-226ENST00000583182 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
CDK5RAP3-226ENST00000583182 NPATQ14207 1427 aa24.09■■□□□ 1.45
CDK5RAP3-226ENST00000583182 INO80Q9ULG1 1556 aaPredicted RBP24.08■■□□□ 1.45
CDK5RAP3-226ENST00000583182 ZMYM3Q14202 1370 aa24.08■■□□□ 1.45
CDK5RAP3-226ENST00000583182 KIAA1107Q9UPP5 1409 aa24.08■■□□□ 1.44
CDK5RAP3-226ENST00000583182 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
CDK5RAP3-226ENST00000583182 CAMSAP1Q5T5Y3 1602 aa24.06■■□□□ 1.44
CDK5RAP3-226ENST00000583182 CLTCQ00610 1675 aaKnown RBP24.06■■□□□ 1.44
CDK5RAP3-226ENST00000583182 CFDP1Q9UEE9 299 aaPredicted RBP24.05■■□□□ 1.44
CDK5RAP3-226ENST00000583182 PLEKHH2Q8IVE3 1493 aa24.05■■□□□ 1.44
CDK5RAP3-226ENST00000583182 A2MP01023 1474 aa24.04■■□□□ 1.44
CDK5RAP3-226ENST00000583182 CCNB3Q8WWL7 1395 aa24.03■■□□□ 1.44
CDK5RAP3-226ENST00000583182 DISP3Q9P2K9 1392 aa24.03■■□□□ 1.44
CDK5RAP3-226ENST00000583182 MYO3AQ8NEV4 1616 aa24■■□□□ 1.43
CDK5RAP3-226ENST00000583182 MTUS2Q5JR59 1369 aa24■■□□□ 1.43
CDK5RAP3-226ENST00000583182 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
CDK5RAP3-226ENST00000583182 ILDR2Q71H61 639 aa23.99■■□□□ 1.43
CDK5RAP3-226ENST00000583182 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
CDK5RAP3-226ENST00000583182 NCKAP5LQ9HCH0 1330 aa23.98■■□□□ 1.43
CDK5RAP3-226ENST00000583182 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
CDK5RAP3-226ENST00000583182 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
CDK5RAP3-226ENST00000583182 GGT6Q6P531 493 aa23.97■■□□□ 1.43
CDK5RAP3-226ENST00000583182 ADGBQ8N7X0 1667 aa23.97■■□□□ 1.43
CDK5RAP3-226ENST00000583182 ZNF644Q9H582 1327 aaPredicted RBP23.97■■□□□ 1.43
CDK5RAP3-226ENST00000583182 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.43
CDK5RAP3-226ENST00000583182 PLA2R1Q13018 1463 aa23.94■■□□□ 1.42
CDK5RAP3-226ENST00000583182 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
CDK5RAP3-226ENST00000583182 ZNF335Q9H4Z2 1342 aaPredicted RBP23.92■■□□□ 1.42
CDK5RAP3-226ENST00000583182 SPATA31D1Q6ZQQ2 1576 aa23.91■■□□□ 1.42
CDK5RAP3-226ENST00000583182 EHBP1L1Q8N3D4 1523 aa23.91■■□□□ 1.42
CDK5RAP3-226ENST00000583182 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
CDK5RAP3-226ENST00000583182 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
CDK5RAP3-226ENST00000583182 PKD2Q13563 968 aa23.88■■□□□ 1.41
CDK5RAP3-226ENST00000583182 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
CDK5RAP3-226ENST00000583182 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
CDK5RAP3-226ENST00000583182 SOCS7O14512 581 aa23.85■■□□□ 1.41
CDK5RAP3-226ENST00000583182 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
CDK5RAP3-226ENST00000583182 DNMT1P26358 1616 aaKnown RBP23.84■■□□□ 1.41
CDK5RAP3-226ENST00000583182 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
CDK5RAP3-226ENST00000583182 UBAP1LF5GYI3 381 aa23.8■■□□□ 1.4
CDK5RAP3-226ENST00000583182 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms