RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 RICTORQ6R327 1708 aa21.34■■□□□ 1.01
CSNK1D-220ENST00000581737 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.33■■□□□ 1
CSNK1D-220ENST00000581737 FANCAO15360 1455 aa21.32■■□□□ 1
CSNK1D-220ENST00000581737 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
CSNK1D-220ENST00000581737 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
CSNK1D-220ENST00000581737 LRRIQ1Q96JM4 1722 aa21.29■■□□□ 1
CSNK1D-220ENST00000581737 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
CSNK1D-220ENST00000581737 MLECQ14165 292 aa21.28■■□□□ 1
CSNK1D-220ENST00000581737 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
CSNK1D-220ENST00000581737 ZMYM4Q5VZL5 1548 aa21.27■■□□□ 1
CSNK1D-220ENST00000581737 ZFYVE16Q7Z3T8 1539 aa21.25■□□□□ 0.99
CSNK1D-220ENST00000581737 CERKQ8TCT0 537 aa21.23■□□□□ 0.99
CSNK1D-220ENST00000581737 POGZQ7Z3K3 1410 aa21.22■□□□□ 0.99
CSNK1D-220ENST00000581737 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
CSNK1D-220ENST00000581737 CFAP74Q9C0B2 1584 aa21.19■□□□□ 0.98
CSNK1D-220ENST00000581737 MAGI2Q86UL8 1455 aa21.19■□□□□ 0.98
CSNK1D-220ENST00000581737 CEBPAP49715 358 aaPredicted RBP21.18■□□□□ 0.98
CSNK1D-220ENST00000581737 TROQ12816 1431 aaPredicted RBP21.18■□□□□ 0.98
CSNK1D-220ENST00000581737 PLCH2O75038 1416 aa21.17■□□□□ 0.98
CSNK1D-220ENST00000581737 KIF14Q15058 1648 aa21.16■□□□□ 0.98
CSNK1D-220ENST00000581737 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
CSNK1D-220ENST00000581737 MAP3K1Q13233 1512 aa21.15■□□□□ 0.98
CSNK1D-220ENST00000581737 ARHGEF12Q9NZN5 1544 aa21.14■□□□□ 0.97
CSNK1D-220ENST00000581737 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
CSNK1D-220ENST00000581737 EHBP1L1Q8N3D4 1523 aa21.12■□□□□ 0.97
CSNK1D-220ENST00000581737 ATP10AO60312 1499 aa21.12■□□□□ 0.97
CSNK1D-220ENST00000581737 MTUS2Q5JR59 1369 aa21.11■□□□□ 0.97
CSNK1D-220ENST00000581737 APLP2Q06481 763 aa21.11■□□□□ 0.97
CSNK1D-220ENST00000581737 C9orf84Q5VXU9 1444 aa21.1■□□□□ 0.97
CSNK1D-220ENST00000581737 ILDR2Q71H61 639 aa21.08■□□□□ 0.97
CSNK1D-220ENST00000581737 AFAP1Q8N556 730 aa21.07■□□□□ 0.96
CSNK1D-220ENST00000581737 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
CSNK1D-220ENST00000581737 LRRC9Q6ZRR7 1453 aa21.04■□□□□ 0.96
CSNK1D-220ENST00000581737 MYO5CQ9NQX4 1742 aa21.04■□□□□ 0.96
CSNK1D-220ENST00000581737 PREX1Q8TCU6 1659 aa21.03■□□□□ 0.96
CSNK1D-220ENST00000581737 STRCQ7RTU9 1775 aa21.02■□□□□ 0.96
CSNK1D-220ENST00000581737 SUPT6HQ7KZ85 1726 aaKnown RBP21.02■□□□□ 0.96
CSNK1D-220ENST00000581737 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
CSNK1D-220ENST00000581737 ZNF518AQ6AHZ1 1483 aa20.99■□□□□ 0.95
CSNK1D-220ENST00000581737 KDM5CP41229 1560 aa20.98■□□□□ 0.95
CSNK1D-220ENST00000581737 DIP2CQ9Y2E4 1556 aa20.97■□□□□ 0.95
CSNK1D-220ENST00000581737 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
CSNK1D-220ENST00000581737 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
CSNK1D-220ENST00000581737 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
CSNK1D-220ENST00000581737 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
CSNK1D-220ENST00000581737 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
CSNK1D-220ENST00000581737 NCOA2Q15596 1464 aa20.94■□□□□ 0.94
CSNK1D-220ENST00000581737 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
CSNK1D-220ENST00000581737 DMRT2Q9Y5R5 561 aa20.93■□□□□ 0.94
CSNK1D-220ENST00000581737 CCNB3Q8WWL7 1395 aa20.93■□□□□ 0.94
CSNK1D-220ENST00000581737 ABCA6Q8N139 1617 aa20.93■□□□□ 0.94
CSNK1D-220ENST00000581737 KANK4Q5T7N3 995 aaPredicted RBP20.92■□□□□ 0.94
CSNK1D-220ENST00000581737 TRAPPC8Q9Y2L5 1435 aa20.92■□□□□ 0.94
CSNK1D-220ENST00000581737 CDC42BPBQ9Y5S2 1711 aa20.91■□□□□ 0.94
CSNK1D-220ENST00000581737 SOCS7O14512 581 aa20.9■□□□□ 0.94
CSNK1D-220ENST00000581737 REREQ9P2R6 1566 aa20.89■□□□□ 0.94
CSNK1D-220ENST00000581737 GPATCH8Q9UKJ3 1502 aaKnown RBP20.89■□□□□ 0.94
CSNK1D-220ENST00000581737 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.94
CSNK1D-220ENST00000581737 C3P01024 1663 aa20.89■□□□□ 0.93
CSNK1D-220ENST00000581737 PTPRTO14522 1441 aa20.88■□□□□ 0.93
CSNK1D-220ENST00000581737 LTBP4Q8N2S1 1624 aa20.88■□□□□ 0.93
CSNK1D-220ENST00000581737 ABCC1P33527 1531 aa20.84■□□□□ 0.93
CSNK1D-220ENST00000581737 AGLP35573 1532 aa20.84■□□□□ 0.93
CSNK1D-220ENST00000581737 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
CSNK1D-220ENST00000581737 NCOA1Q15788 1441 aa20.82■□□□□ 0.92
CSNK1D-220ENST00000581737 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
CSNK1D-220ENST00000581737 MYOM3Q5VTT5 1437 aa20.81■□□□□ 0.92
CSNK1D-220ENST00000581737 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
CSNK1D-220ENST00000581737 ESF1Q9H501 851 aaKnown RBP20.79■□□□□ 0.92
CSNK1D-220ENST00000581737 SAMD9LQ8IVG5 1584 aa20.79■□□□□ 0.92
CSNK1D-220ENST00000581737 KIDINS220Q9ULH0 1771 aa20.79■□□□□ 0.92
CSNK1D-220ENST00000581737 SETD1BQ9UPS6 1966 aaKnown RBP20.79■□□□□ 0.92
CSNK1D-220ENST00000581737 MIA2Q96PC5 1412 aa20.78■□□□□ 0.92
CSNK1D-220ENST00000581737 NCKAP5LQ9HCH0 1330 aa20.76■□□□□ 0.91
CSNK1D-220ENST00000581737 ZNF777Q9ULD5 760 aaPredicted RBP20.75■□□□□ 0.91
CSNK1D-220ENST00000581737 CAMSAP1Q5T5Y3 1602 aa20.75■□□□□ 0.91
CSNK1D-220ENST00000581737 CNTLNQ9NXG0 1405 aa20.74■□□□□ 0.91
CSNK1D-220ENST00000581737 KIAA1107Q9UPP5 1409 aa20.74■□□□□ 0.91
CSNK1D-220ENST00000581737 ZMYM3Q14202 1370 aa20.73■□□□□ 0.91
CSNK1D-220ENST00000581737 CAMSAP2Q08AD1 1489 aa20.73■□□□□ 0.91
CSNK1D-220ENST00000581737 ZNF335Q9H4Z2 1342 aaPredicted RBP20.73■□□□□ 0.91
CSNK1D-220ENST00000581737 SYCP2Q9BX26 1530 aa20.73■□□□□ 0.91
CSNK1D-220ENST00000581737 FGD6Q6ZV73 1430 aa20.71■□□□□ 0.91
CSNK1D-220ENST00000581737 IQSEC2Q5JU85 1478 aa20.71■□□□□ 0.91
CSNK1D-220ENST00000581737 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.911e-6■■■□□ 18.3
CSNK1D-220ENST00000581737 NPATQ14207 1427 aa20.7■□□□□ 0.9
CSNK1D-220ENST00000581737 PTPN23Q9H3S7 1636 aa20.69■□□□□ 0.9
CSNK1D-220ENST00000581737 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
CSNK1D-220ENST00000581737 SPAG9O60271 1321 aaKnown RBP20.67■□□□□ 0.9
CSNK1D-220ENST00000581737 ZNF644Q9H582 1327 aaPredicted RBP20.66■□□□□ 0.9
CSNK1D-220ENST00000581737 ARHGEF5Q12774 1597 aa20.66■□□□□ 0.9
CSNK1D-220ENST00000581737 TCOF1Q13428 1488 aaKnown RBP20.65■□□□□ 0.9
CSNK1D-220ENST00000581737 MROH2AA6NES4 1674 aa20.64■□□□□ 0.9
CSNK1D-220ENST00000581737 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.89
CSNK1D-220ENST00000581737 UBAP1LF5GYI3 381 aa20.64■□□□□ 0.89
CSNK1D-220ENST00000581737 RSPH4AQ5TD94 716 aa20.64■□□□□ 0.89
CSNK1D-220ENST00000581737 MBD5Q9P267 1494 aa20.63■□□□□ 0.89
CSNK1D-220ENST00000581737 PTPRKQ15262 1439 aa20.63■□□□□ 0.89
CSNK1D-220ENST00000581737 CLTCQ00610 1675 aaKnown RBP20.62■□□□□ 0.89
CSNK1D-220ENST00000581737 PLXNC1O60486 1568 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms