RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 DHX57Q6P158 1386 aaKnown RBP9.53□□□□□ -0.88
CMTM4-205ENST00000581487 FHAD1B1AJZ9 1412 aa9.53□□□□□ -0.88
CMTM4-205ENST00000581487 PATL2C9JE40 543 aaKnown RBP9.52□□□□□ -0.89
CMTM4-205ENST00000581487 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
CMTM4-205ENST00000581487 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.89
CMTM4-205ENST00000581487 CFDP1Q9UEE9 299 aaPredicted RBP9.51□□□□□ -0.89
CMTM4-205ENST00000581487 RGL3Q3MIN7 710 aa9.5□□□□□ -0.89
CMTM4-205ENST00000581487 SETQ01105 290 aaPredicted RBP9.5□□□□□ -0.89
CMTM4-205ENST00000581487 KCNH8Q96L42 1107 aa9.49□□□□□ -0.89
CMTM4-205ENST00000581487 CEP89Q96ST8 783 aa9.49□□□□□ -0.89
CMTM4-205ENST00000581487 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
CMTM4-205ENST00000581487 CUX2O14529 1486 aa9.47□□□□□ -0.89
CMTM4-205ENST00000581487 TAF7LQ5H9L4 462 aa9.47□□□□□ -0.89
CMTM4-205ENST00000581487 C14orf37Q86TY3 774 aa9.47□□□□□ -0.89
CMTM4-205ENST00000581487 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
CMTM4-205ENST00000581487 RGS3P49796 1198 aa9.47□□□□□ -0.89
CMTM4-205ENST00000581487 WWC1Q8IX03 1113 aa9.46□□□□□ -0.89
CMTM4-205ENST00000581487 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.89
CMTM4-205ENST00000581487 MEX3CQ5U5Q3 659 aaKnown RBP9.46□□□□□ -0.89
CMTM4-205ENST00000581487 NAP1L2Q9ULW6 460 aaPredicted RBP9.46□□□□□ -0.89
CMTM4-205ENST00000581487 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.9
CMTM4-205ENST00000581487 ARHGAP35Q9NRY4 1499 aa9.45□□□□□ -0.9
CMTM4-205ENST00000581487 STK11IPQ8N1F8 1099 aa9.45□□□□□ -0.9
CMTM4-205ENST00000581487 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.45□□□□□ -0.9
CMTM4-205ENST00000581487 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
CMTM4-205ENST00000581487 PTMSP20962 102 aa9.44□□□□□ -0.9
CMTM4-205ENST00000581487 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
CMTM4-205ENST00000581487 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
CMTM4-205ENST00000581487 RAPGEF2Q9Y4G8 1499 aa9.43□□□□□ -0.9
CMTM4-205ENST00000581487 NPM1P06748 294 aaKnown RBP eCLIP9.43□□□□□ -0.9
CMTM4-205ENST00000581487 GZF1Q9H116 711 aaPredicted RBP9.43□□□□□ -0.9
CMTM4-205ENST00000581487 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.42□□□□□ -0.9
CMTM4-205ENST00000581487 FOXD1Q16676 465 aa9.42□□□□□ -0.9
CMTM4-205ENST00000581487 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
CMTM4-205ENST00000581487 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
CMTM4-205ENST00000581487 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
CMTM4-205ENST00000581487 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
CMTM4-205ENST00000581487 FGD1P98174 961 aa9.41□□□□□ -0.9
CMTM4-205ENST00000581487 ZNF771Q7L3S4 317 aaPredicted RBP9.41□□□□□ -0.9
CMTM4-205ENST00000581487 CASC1Q6TDU7 716 aa9.4□□□□□ -0.9
CMTM4-205ENST00000581487 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
CMTM4-205ENST00000581487 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.9
CMTM4-205ENST00000581487 BCCIPQ9P287 314 aaKnown RBP eCLIP9.4□□□□□ -0.9
CMTM4-205ENST00000581487 NUDCQ9Y266 331 aa9.4□□□□□ -0.9
CMTM4-205ENST00000581487 IPO9Q96P70 1041 aaKnown RBP9.4□□□□□ -0.91
CMTM4-205ENST00000581487 TCERG1O14776 1098 aaKnown RBP9.39□□□□□ -0.91
CMTM4-205ENST00000581487 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 L3MBTL2Q969R5 705 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 USP35Q9P2H5 1018 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 GOLGA6L3A6NEY3 463 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 DRC7Q8IY82 874 aa9.39□□□□□ -0.91
CMTM4-205ENST00000581487 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
CMTM4-205ENST00000581487 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
CMTM4-205ENST00000581487 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
CMTM4-205ENST00000581487 PKD2Q13563 968 aa9.38□□□□□ -0.91
CMTM4-205ENST00000581487 TMF1P82094 1093 aa9.37□□□□□ -0.91
CMTM4-205ENST00000581487 PDCL3Q9H2J4 239 aa9.37□□□□□ -0.91
CMTM4-205ENST00000581487 FTSJ3Q8IY81 847 aaKnown RBP9.36□□□□□ -0.91
CMTM4-205ENST00000581487 RALBP1Q15311 655 aa9.36□□□□□ -0.91
CMTM4-205ENST00000581487 FANCIQ9NVI1 1328 aa9.36□□□□□ -0.91
CMTM4-205ENST00000581487 KTN1Q86UP2 1357 aaKnown RBP9.36□□□□□ -0.91
CMTM4-205ENST00000581487 GNL2Q13823 731 aaKnown RBP9.35□□□□□ -0.91
CMTM4-205ENST00000581487 PPM1FP49593 454 aaPredicted RBP9.35□□□□□ -0.91
CMTM4-205ENST00000581487 SMARCA2P51531 1590 aa9.35□□□□□ -0.91
CMTM4-205ENST00000581487 WIZO95785 1651 aa9.34□□□□□ -0.91
CMTM4-205ENST00000581487 PRKRIP1Q9H875 184 aaPredicted RBP9.34□□□□□ -0.91
CMTM4-205ENST00000581487 HSCBQ8IWL3 235 aa9.33□□□□□ -0.92
CMTM4-205ENST00000581487 FHOD3Q2V2M9 1422 aa9.33□□□□□ -0.92
CMTM4-205ENST00000581487 HTATSF1O43719 755 aaKnown RBP9.33□□□□□ -0.92
CMTM4-205ENST00000581487 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
CMTM4-205ENST00000581487 GSE1Q14687 1217 aa9.32□□□□□ -0.92
CMTM4-205ENST00000581487 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
CMTM4-205ENST00000581487 FAM13BQ9NYF5 915 aa9.31□□□□□ -0.92
CMTM4-205ENST00000581487 MAPK8IP3Q9UPT6 1336 aa9.31□□□□□ -0.92
CMTM4-205ENST00000581487 VPS53Q5VIR6 699 aa9.31□□□□□ -0.92
CMTM4-205ENST00000581487 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
CMTM4-205ENST00000581487 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
CMTM4-205ENST00000581487 TPM4P67936 248 aa9.31□□□□□ -0.92
CMTM4-205ENST00000581487 CWC22Q9HCG8 908 aaKnown RBP9.31□□□□□ -0.92
CMTM4-205ENST00000581487 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
CMTM4-205ENST00000581487 G3V3G9 751 aa9.3□□□□□ -0.92
CMTM4-205ENST00000581487 DCAF8Q5TAQ9 597 aa9.3□□□□□ -0.92
CMTM4-205ENST00000581487 PAF1Q8N7H5 531 aa9.3□□□□□ -0.92
CMTM4-205ENST00000581487 PDE3BQ13370 1112 aa9.3□□□□□ -0.92
CMTM4-205ENST00000581487 MS4A1P11836 297 aa9.3□□□□□ -0.92
CMTM4-205ENST00000581487 EIF4G1Q04637 1599 aaKnown RBP9.3□□□□□ -0.92
CMTM4-205ENST00000581487 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
CMTM4-205ENST00000581487 HSP90B1P14625 803 aaKnown RBP9.29□□□□□ -0.92
CMTM4-205ENST00000581487 SLKQ9H2G2 1235 aaPredicted RBP9.29□□□□□ -0.92
CMTM4-205ENST00000581487 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
CMTM4-205ENST00000581487 KCNJ4P48050 445 aa9.28□□□□□ -0.92
CMTM4-205ENST00000581487 NUP155O75694 1391 aa9.28□□□□□ -0.92
CMTM4-205ENST00000581487 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
CMTM4-205ENST00000581487 TDRD9Q8NDG6 1382 aaKnown RBP9.28□□□□□ -0.92
CMTM4-205ENST00000581487 ROCK2O75116 1388 aaKnown RBP9.28□□□□□ -0.92
CMTM4-205ENST00000581487 PDE4AP27815 886 aa9.27□□□□□ -0.93
CMTM4-205ENST00000581487 IL27Q8NEV9 243 aa9.27□□□□□ -0.93
CMTM4-205ENST00000581487 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms