RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 MLECQ14165 292 aa17.04■□□□□ 0.32
SNRPD1-203ENST00000579618 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
SNRPD1-203ENST00000579618 ARHGEF12Q9NZN5 1544 aa17.02■□□□□ 0.32
SNRPD1-203ENST00000579618 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
SNRPD1-203ENST00000579618 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
SNRPD1-203ENST00000579618 EEA1Q15075 1411 aa16.94■□□□□ 0.3
SNRPD1-203ENST00000579618 C9orf84Q5VXU9 1444 aa16.94■□□□□ 0.3
SNRPD1-203ENST00000579618 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
SNRPD1-203ENST00000579618 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
SNRPD1-203ENST00000579618 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
SNRPD1-203ENST00000579618 ATP10AO60312 1499 aa16.92■□□□□ 0.3
SNRPD1-203ENST00000579618 LTBP4Q8N2S1 1624 aa16.91■□□□□ 0.3
SNRPD1-203ENST00000579618 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
SNRPD1-203ENST00000579618 RANGAP1P46060 587 aaPredicted RBP16.89■□□□□ 0.29
SNRPD1-203ENST00000579618 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
SNRPD1-203ENST00000579618 C3P01024 1663 aa16.88■□□□□ 0.29
SNRPD1-203ENST00000579618 PTPRTO14522 1441 aa16.87■□□□□ 0.29
SNRPD1-203ENST00000579618 MYO5CQ9NQX4 1742 aa16.87■□□□□ 0.29
SNRPD1-203ENST00000579618 PLCH2O75038 1416 aa16.87■□□□□ 0.29
SNRPD1-203ENST00000579618 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
SNRPD1-203ENST00000579618 IQSEC2Q5JU85 1478 aa16.84■□□□□ 0.29
SNRPD1-203ENST00000579618 KDM5CP41229 1560 aa16.84■□□□□ 0.29
SNRPD1-203ENST00000579618 ABCA6Q8N139 1617 aa16.82■□□□□ 0.28
SNRPD1-203ENST00000579618 KIF14Q15058 1648 aa16.81■□□□□ 0.28
SNRPD1-203ENST00000579618 REREQ9P2R6 1566 aa16.81■□□□□ 0.28
SNRPD1-203ENST00000579618 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
SNRPD1-203ENST00000579618 SETD1BQ9UPS6 1966 aaKnown RBP16.8■□□□□ 0.28
SNRPD1-203ENST00000579618 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
SNRPD1-203ENST00000579618 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
SNRPD1-203ENST00000579618 ARHGAP5Q13017 1502 aa16.75■□□□□ 0.27
SNRPD1-203ENST00000579618 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
SNRPD1-203ENST00000579618 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
SNRPD1-203ENST00000579618 AFAP1Q8N556 730 aa16.74■□□□□ 0.27
SNRPD1-203ENST00000579618 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
SNRPD1-203ENST00000579618 AGLP35573 1532 aa16.72■□□□□ 0.27
SNRPD1-203ENST00000579618 CDC42BPBQ9Y5S2 1711 aa16.72■□□□□ 0.27
SNRPD1-203ENST00000579618 ITSN2Q9NZM3 1697 aa16.7■□□□□ 0.26
SNRPD1-203ENST00000579618 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
SNRPD1-203ENST00000579618 MLH3Q9UHC1 1453 aa16.69■□□□□ 0.26
SNRPD1-203ENST00000579618 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
SNRPD1-203ENST00000579618 ZNF335Q9H4Z2 1342 aaPredicted RBP16.69■□□□□ 0.26
SNRPD1-203ENST00000579618 ABCC1P33527 1531 aa16.68■□□□□ 0.26
SNRPD1-203ENST00000579618 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
SNRPD1-203ENST00000579618 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
SNRPD1-203ENST00000579618 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
SNRPD1-203ENST00000579618 ZNF142P52746 1687 aaPredicted RBP16.67■□□□□ 0.26
SNRPD1-203ENST00000579618 UBAP1LF5GYI3 381 aa16.67■□□□□ 0.26
SNRPD1-203ENST00000579618 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
SNRPD1-203ENST00000579618 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
SNRPD1-203ENST00000579618 SUPT6HQ7KZ85 1726 aaKnown RBP16.66■□□□□ 0.26
SNRPD1-203ENST00000579618 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
SNRPD1-203ENST00000579618 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
SNRPD1-203ENST00000579618 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
SNRPD1-203ENST00000579618 ATP1B4Q9UN42 357 aaPredicted RBP16.64■□□□□ 0.25
SNRPD1-203ENST00000579618 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
SNRPD1-203ENST00000579618 NPATQ14207 1427 aa16.62■□□□□ 0.25
SNRPD1-203ENST00000579618 CLTCQ00610 1675 aaKnown RBP16.61■□□□□ 0.25
SNRPD1-203ENST00000579618 FMN1Q68DA7 1419 aa16.61■□□□□ 0.25
SNRPD1-203ENST00000579618 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
SNRPD1-203ENST00000579618 CLIP1P30622 1438 aa16.6■□□□□ 0.25
SNRPD1-203ENST00000579618 PLA2R1Q13018 1463 aa16.6■□□□□ 0.25
SNRPD1-203ENST00000579618 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
SNRPD1-203ENST00000579618 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
SNRPD1-203ENST00000579618 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
SNRPD1-203ENST00000579618 CDC42BPAQ5VT25 1732 aa16.58■□□□□ 0.24
SNRPD1-203ENST00000579618 SAMD9LQ8IVG5 1584 aa16.57■□□□□ 0.24
SNRPD1-203ENST00000579618 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
SNRPD1-203ENST00000579618 HSPA1LP34931 641 aa16.55■□□□□ 0.24
SNRPD1-203ENST00000579618 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
SNRPD1-203ENST00000579618 PKD2Q13563 968 aa16.53■□□□□ 0.24
SNRPD1-203ENST00000579618 PTPRKQ15262 1439 aa16.53■□□□□ 0.24
SNRPD1-203ENST00000579618 PLXNC1O60486 1568 aa16.52■□□□□ 0.24
SNRPD1-203ENST00000579618 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.24
SNRPD1-203ENST00000579618 POLR1AO95602 1720 aaPredicted RBP16.52■□□□□ 0.24
SNRPD1-203ENST00000579618 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
SNRPD1-203ENST00000579618 DNMT1P26358 1616 aaKnown RBP16.5■□□□□ 0.23
SNRPD1-203ENST00000579618 PIP4K2BP78356 416 aa16.5■□□□□ 0.23
SNRPD1-203ENST00000579618 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
SNRPD1-203ENST00000579618 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
SNRPD1-203ENST00000579618 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
SNRPD1-203ENST00000579618 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
SNRPD1-203ENST00000579618 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
SNRPD1-203ENST00000579618 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
SNRPD1-203ENST00000579618 CPS1P31327 1500 aa16.47■□□□□ 0.23
SNRPD1-203ENST00000579618 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
SNRPD1-203ENST00000579618 LOC105371045A0A1W2PR82 267 aa16.45■□□□□ 0.22
SNRPD1-203ENST00000579618 A2MP01023 1474 aa16.44■□□□□ 0.22
SNRPD1-203ENST00000579618 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
SNRPD1-203ENST00000579618 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
SNRPD1-203ENST00000579618 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
SNRPD1-203ENST00000579618 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
SNRPD1-203ENST00000579618 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
SNRPD1-203ENST00000579618 TOM1O60784 492 aa16.42■□□□□ 0.22
SNRPD1-203ENST00000579618 ZNF777Q9ULD5 760 aaPredicted RBP16.42■□□□□ 0.22
SNRPD1-203ENST00000579618 ADGBQ8N7X0 1667 aa16.41■□□□□ 0.22
SNRPD1-203ENST00000579618 GGT6Q6P531 493 aa16.4■□□□□ 0.22
SNRPD1-203ENST00000579618 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
SNRPD1-203ENST00000579618 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
SNRPD1-203ENST00000579618 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNRPD1-203ENST00000579618 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms