RNA–Protein interactions for RNA: ENST00000579173.1

BPTF-212, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-212ENST00000579173 POTEB3A0JP26 581 aa14.79□□□□□ -0.04
BPTF-212ENST00000579173 POTEBQ6S5H4 581 aa14.79□□□□□ -0.04
BPTF-212ENST00000579173 PPP1R37O75864 691 aa14.78□□□□□ -0.04
BPTF-212ENST00000579173 HS3ST6Q96QI5 342 aa14.78□□□□□ -0.04
BPTF-212ENST00000579173 HS6ST3Q8IZP7 471 aa14.75□□□□□ -0.05
BPTF-212ENST00000579173 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
BPTF-212ENST00000579173 HOXB1P14653 301 aaPredicted RBP14.72□□□□□ -0.05
BPTF-212ENST00000579173 C2orf72A6NCS6 295 aa14.71□□□□□ -0.05
BPTF-212ENST00000579173 ERBB3P21860 1342 aa14.68□□□□□ -0.06
BPTF-212ENST00000579173 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
BPTF-212ENST00000579173 KHSRPQ92945 711 aaKnown RBP eCLIP14.66□□□□□ -0.06
BPTF-212ENST00000579173 ARSIQ5FYB1 569 aa14.64□□□□□ -0.07
BPTF-212ENST00000579173 KIF3CO14782 793 aa14.63□□□□□ -0.07
BPTF-212ENST00000579173 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
BPTF-212ENST00000579173 VARS2Q5ST30 1063 aaKnown RBP14.63□□□□□ -0.07
BPTF-212ENST00000579173 GPR153Q6NV75 609 aa14.63□□□□□ -0.07
BPTF-212ENST00000579173 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
BPTF-212ENST00000579173 KRTAP3-3Q9BYR6 98 aa14.62□□□□□ -0.07
BPTF-212ENST00000579173 KRTAP3-2Q9BYR7 98 aa14.62□□□□□ -0.07
BPTF-212ENST00000579173 ZSWIM6Q9HCJ5 1215 aa14.59□□□□□ -0.07
BPTF-212ENST00000579173 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
BPTF-212ENST00000579173 MMRN1Q13201 1228 aa14.52□□□□□ -0.09
BPTF-212ENST00000579173 NUDT7P0C024 238 aa14.51□□□□□ -0.09
BPTF-212ENST00000579173 PCDHGA4Q9Y5G9 962 aa14.47□□□□□ -0.09
BPTF-212ENST00000579173 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
BPTF-212ENST00000579173 DNAJC5Q9H3Z4 198 aa14.45□□□□□ -0.1
BPTF-212ENST00000579173 DSG2Q14126 1118 aa14.42□□□□□ -0.1
BPTF-212ENST00000579173 PLPP6Q8IY26 295 aa14.42□□□□□ -0.1
BPTF-212ENST00000579173 ZNF687Q8N1G0 1237 aa14.42□□□□□ -0.1
BPTF-212ENST00000579173 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
BPTF-212ENST00000579173 LHX6Q9UPM6 363 aa14.4□□□□□ -0.1
BPTF-212ENST00000579173 FOXK1P85037 733 aa14.39□□□□□ -0.11
BPTF-212ENST00000579173 SLC34A2O95436 690 aa14.38□□□□□ -0.11
BPTF-212ENST00000579173 RYDENQ9NUL5 291 aaKnown RBP14.38□□□□□ -0.11
BPTF-212ENST00000579173 GTPBP6O43824 516 aaPredicted RBP14.37□□□□□ -0.11
BPTF-212ENST00000579173 ANKRD13DQ6ZTN6 518 aa14.32□□□□□ -0.12
BPTF-212ENST00000579173 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.12
BPTF-212ENST00000579173 AXIN2Q9Y2T1 843 aa14.31□□□□□ -0.12
BPTF-212ENST00000579173 PTCD2Q8WV60 388 aaKnown RBP14.29□□□□□ -0.12
BPTF-212ENST00000579173 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
BPTF-212ENST00000579173 CRISPLD2Q9H0B8 497 aa14.28□□□□□ -0.12
BPTF-212ENST00000579173 PPP1R15BQ5SWA1 713 aa14.27□□□□□ -0.13
BPTF-212ENST00000579173 POTEEQ6S8J3 1075 aa14.26□□□□□ -0.13
BPTF-212ENST00000579173 LSM11P83369 360 aaKnown RBP eCLIP14.22□□□□□ -0.13
BPTF-212ENST00000579173 LARP6Q9BRS8 491 aaKnown RBP14.22□□□□□ -0.13
BPTF-212ENST00000579173 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.13
BPTF-212ENST00000579173 PDE4AP27815 886 aa14.21□□□□□ -0.13
BPTF-212ENST00000579173 RNF166Q96A37 237 aaPredicted RBP14.21□□□□□ -0.13
BPTF-212ENST00000579173 TBC1D12O60347 775 aa14.2□□□□□ -0.14
BPTF-212ENST00000579173 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
BPTF-212ENST00000579173 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
BPTF-212ENST00000579173 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
BPTF-212ENST00000579173 OXER1Q8TDS5 423 aa14.17□□□□□ -0.14
BPTF-212ENST00000579173 DDX27Q96GQ7 796 aaKnown RBP14.16□□□□□ -0.14
BPTF-212ENST00000579173 PBX2P40425 430 aa14.14□□□□□ -0.15
BPTF-212ENST00000579173 PSEN2P49810 448 aa14.14□□□□□ -0.15
BPTF-212ENST00000579173 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
BPTF-212ENST00000579173 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
BPTF-212ENST00000579173 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
BPTF-212ENST00000579173 ARHGAP33O14559 1287 aa14.1□□□□□ -0.15
BPTF-212ENST00000579173 DMRTA1Q5VZB9 504 aa14.1□□□□□ -0.15
BPTF-212ENST00000579173 ZNF454Q8N9F8 522 aa14.09□□□□□ -0.15
BPTF-212ENST00000579173 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
BPTF-212ENST00000579173 KCNK17Q96T54 332 aa14.07□□□□□ -0.16
BPTF-212ENST00000579173 MFSD10Q14728 455 aa14.06□□□□□ -0.16
BPTF-212ENST00000579173 PTGER2P43116 358 aa14.05□□□□□ -0.16
BPTF-212ENST00000579173 ADGRD1Q6QNK2 874 aa14.05□□□□□ -0.16
BPTF-212ENST00000579173 EVI5O60447 810 aa14.04□□□□□ -0.16
BPTF-212ENST00000579173 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
BPTF-212ENST00000579173 MAP3K9P80192 1104 aa14.03□□□□□ -0.16
BPTF-212ENST00000579173 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
BPTF-212ENST00000579173 FOSBP53539 338 aa13.96□□□□□ -0.17
BPTF-212ENST00000579173 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
BPTF-212ENST00000579173 KCNH8Q96L42 1107 aa13.96□□□□□ -0.17
BPTF-212ENST00000579173 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.96□□□□□ -0.17
BPTF-212ENST00000579173 PAXIP1Q6ZW49 1069 aaPredicted RBP13.94□□□□□ -0.18
BPTF-212ENST00000579173 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
BPTF-212ENST00000579173 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
BPTF-212ENST00000579173 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
BPTF-212ENST00000579173 ADAM33Q9BZ11 813 aa13.91□□□□□ -0.18
BPTF-212ENST00000579173 TK2O00142 265 aa13.9□□□□□ -0.18
BPTF-212ENST00000579173 DPYSL4O14531 572 aa13.9□□□□□ -0.18
BPTF-212ENST00000579173 HRO43593 1189 aa13.9□□□□□ -0.18
BPTF-212ENST00000579173 PTPREP23469 700 aa13.89□□□□□ -0.19
BPTF-212ENST00000579173 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
BPTF-212ENST00000579173 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
BPTF-212ENST00000579173 VPS9D1Q9Y2B5 631 aa13.87□□□□□ -0.19
BPTF-212ENST00000579173 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
BPTF-212ENST00000579173 PCDHGA10Q9Y5H3 936 aa13.85□□□□□ -0.19
BPTF-212ENST00000579173 CAMK2BQ13554 666 aa13.84□□□□□ -0.19
BPTF-212ENST00000579173 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
BPTF-212ENST00000579173 DDX12PQ92771 950 aa13.78□□□□□ -0.2
BPTF-212ENST00000579173 HCSTQ9UBK5 93 aa13.77□□□□□ -0.21
BPTF-212ENST00000579173 COL9A1P20849 921 aa13.76□□□□□ -0.21
BPTF-212ENST00000579173 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
BPTF-212ENST00000579173 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
BPTF-212ENST00000579173 PHF14O94880 888 aa13.75□□□□□ -0.21
BPTF-212ENST00000579173 PROX2Q3B8N5 592 aa13.75□□□□□ -0.21
BPTF-212ENST00000579173 PTPN5P54829 565 aa13.74□□□□□ -0.21
BPTF-212ENST00000579173 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms