RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TTC37Q6PGP7 1564 aa29.83■■■□□ 2.37
SMG8-203ENST00000578922 ABCC5O15440 1437 aa29.83■■■□□ 2.37
SMG8-203ENST00000578922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.83■■■□□ 2.37
SMG8-203ENST00000578922 NAIPQ13075 1403 aa29.82■■■□□ 2.36
SMG8-203ENST00000578922 DNMT1P26358 1616 aaKnown RBP29.81■■■□□ 2.36
SMG8-203ENST00000578922 CDC42BPBQ9Y5S2 1711 aa29.76■■■□□ 2.35
SMG8-203ENST00000578922 PREX2Q70Z35 1606 aa29.75■■■□□ 2.35
SMG8-203ENST00000578922 NPM1P06748 294 aaKnown RBP eCLIP29.72■■■□□ 2.35
SMG8-203ENST00000578922 ARHGAP5Q13017 1502 aa29.72■■■□□ 2.35
SMG8-203ENST00000578922 WDR7Q9Y4E6 1490 aa29.72■■■□□ 2.35
SMG8-203ENST00000578922 HNRNPMP52272 730 aaKnown RBP eCLIP29.71■■■□□ 2.35
SMG8-203ENST00000578922 MYO5CQ9NQX4 1742 aa29.69■■■□□ 2.34
SMG8-203ENST00000578922 ASXL2Q76L83 1435 aa29.69■■■□□ 2.34
SMG8-203ENST00000578922 AKNAQ7Z591 1439 aa29.69■■■□□ 2.34
SMG8-203ENST00000578922 CLSPNQ9HAW4 1339 aa29.68■■■□□ 2.34
SMG8-203ENST00000578922 SAMD9LQ8IVG5 1584 aa29.68■■■□□ 2.34
SMG8-203ENST00000578922 GCC2Q8IWJ2 1684 aa29.68■■■□□ 2.34
SMG8-203ENST00000578922 ROCK1Q13464 1354 aa29.66■■■□□ 2.34
SMG8-203ENST00000578922 CYB5RLQ6IPT4 315 aa29.66■■■□□ 2.34
SMG8-203ENST00000578922 KDM6BO15054 1643 aa29.66■■■□□ 2.34
SMG8-203ENST00000578922 MAPKBP1O60336 1514 aa29.64■■■□□ 2.34
SMG8-203ENST00000578922 CROCC2H7BZ55 1655 aa29.63■■■□□ 2.33
SMG8-203ENST00000578922 RIMBP3CA6NJZ7 1639 aa29.62■■■□□ 2.33
SMG8-203ENST00000578922 RIMBP3BA6NNM3 1639 aa29.62■■■□□ 2.33
SMG8-203ENST00000578922 RIMBP3Q9UFD9 1639 aa29.62■■■□□ 2.33
SMG8-203ENST00000578922 PLCH2O75038 1416 aa29.61■■■□□ 2.33
SMG8-203ENST00000578922 MBD5Q9P267 1494 aa29.6■■■□□ 2.33
SMG8-203ENST00000578922 TSPY4P0CV99 314 aa29.59■■■□□ 2.33
SMG8-203ENST00000578922 TSPY10P0CW01 314 aa29.59■■■□□ 2.33
SMG8-203ENST00000578922 TRIM52Q96A61 297 aa29.59■■■□□ 2.33
SMG8-203ENST00000578922 SYCP2Q9BX26 1530 aa29.58■■■□□ 2.33
SMG8-203ENST00000578922 NCOA1Q15788 1441 aa29.58■■■□□ 2.33
SMG8-203ENST00000578922 C9orf84Q5VXU9 1444 aa29.57■■■□□ 2.32
SMG8-203ENST00000578922 ADGBQ8N7X0 1667 aa29.57■■■□□ 2.32
SMG8-203ENST00000578922 EFCAB2Q5VUJ9 269 aa29.56■■■□□ 2.32
SMG8-203ENST00000578922 ANKRD30AQ9BXX3 1397 aa29.55■■■□□ 2.32
SMG8-203ENST00000578922 ARHGEF5Q12774 1597 aa29.55■■■□□ 2.32
SMG8-203ENST00000578922 CCDC141Q6ZP82 1450 aa29.54■■■□□ 2.32
SMG8-203ENST00000578922 ADGRL2O95490 1459 aa29.53■■■□□ 2.32
SMG8-203ENST00000578922 SHANK2Q9UPX8 1470 aa29.52■■■□□ 2.32
SMG8-203ENST00000578922 ABCA9Q8IUA7 1624 aa29.5■■■□□ 2.31
SMG8-203ENST00000578922 SIN3AQ96ST3 1273 aa29.49■■■□□ 2.31
SMG8-203ENST00000578922 ARHGEF12Q9NZN5 1544 aa29.49■■■□□ 2.31
SMG8-203ENST00000578922 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
SMG8-203ENST00000578922 NEUROD1Q13562 356 aa29.47■■■□□ 2.31
SMG8-203ENST00000578922 RSPH4AQ5TD94 716 aa29.47■■■□□ 2.31
SMG8-203ENST00000578922 KIAA1107Q9UPP5 1409 aa29.46■■■□□ 2.31
SMG8-203ENST00000578922 DIEXFQ68CQ4 756 aaKnown RBP29.43■■■□□ 2.3
SMG8-203ENST00000578922 ABCC1P33527 1531 aa29.42■■■□□ 2.3
SMG8-203ENST00000578922 FANCAO15360 1455 aa29.42■■■□□ 2.3
SMG8-203ENST00000578922 KIF15Q9NS87 1388 aa29.42■■■□□ 2.3
SMG8-203ENST00000578922 ARAP3Q8WWN8 1544 aa29.42■■■□□ 2.3
SMG8-203ENST00000578922 ANKRD50Q9ULJ7 1429 aa29.41■■■□□ 2.3
SMG8-203ENST00000578922 MPHOSPH9Q99550 1183 aa29.4■■■□□ 2.3
SMG8-203ENST00000578922 SCAF1Q9H7N4 1312 aaKnown RBP29.39■■■□□ 2.3
SMG8-203ENST00000578922 TRAPPC8Q9Y2L5 1435 aa29.39■■■□□ 2.3
SMG8-203ENST00000578922 DENND4BO75064 1496 aaPredicted RBP29.36■■■□□ 2.29
SMG8-203ENST00000578922 FOXD1Q16676 465 aa29.35■■■□□ 2.29
SMG8-203ENST00000578922 AFAP1Q8N556 730 aa29.35■■■□□ 2.29
SMG8-203ENST00000578922 CD109Q6YHK3 1445 aa29.34■■■□□ 2.29
SMG8-203ENST00000578922 MAST1Q9Y2H9 1570 aa29.32■■■□□ 2.28
SMG8-203ENST00000578922 SLC4A1APQ9BWU0 796 aaKnown RBP29.32■■■□□ 2.28
SMG8-203ENST00000578922 ADGRL1O94910 1474 aa29.3■■■□□ 2.28
SMG8-203ENST00000578922 ACIN1Q9UKV3 1341 aaKnown RBP29.29■■■□□ 2.28
SMG8-203ENST00000578922 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
SMG8-203ENST00000578922 ZNF316A6NFI3 1004 aaPredicted RBP29.28■■■□□ 2.28
SMG8-203ENST00000578922 SPAG9O60271 1321 aaKnown RBP29.27■■■□□ 2.28
SMG8-203ENST00000578922 PZPP20742 1482 aa29.25■■■□□ 2.27
SMG8-203ENST00000578922 NUP155O75694 1391 aa29.23■■■□□ 2.27
SMG8-203ENST00000578922 PLXNC1O60486 1568 aa29.23■■■□□ 2.27
SMG8-203ENST00000578922 MYT1LQ9UL68 1186 aa29.22■■■□□ 2.27
SMG8-203ENST00000578922 PELP1Q8IZL8 1130 aaKnown RBP29.2■■■□□ 2.26
SMG8-203ENST00000578922 CENPBP07199 599 aaPredicted RBP29.18■■■□□ 2.26
SMG8-203ENST00000578922 TONSLQ96HA7 1378 aa29.17■■■□□ 2.26
SMG8-203ENST00000578922 ZFYVE16Q7Z3T8 1539 aa29.17■■■□□ 2.26
SMG8-203ENST00000578922 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
SMG8-203ENST00000578922 PKD2Q13563 968 aa29.16■■■□□ 2.26
SMG8-203ENST00000578922 DUOX2Q9NRD8 1548 aa29.15■■■□□ 2.26
SMG8-203ENST00000578922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.26
SMG8-203ENST00000578922 RTEL1-TNFRSF6BF6WH68 1400 aa29.14■■■□□ 2.25
SMG8-203ENST00000578922 TIMELESSQ9UNS1 1208 aa29.13■■■□□ 2.25
SMG8-203ENST00000578922 CFAP74Q9C0B2 1584 aa29.13■■■□□ 2.25
SMG8-203ENST00000578922 ANKRD30BQ9BXX2 1392 aa29.12■■■□□ 2.25
SMG8-203ENST00000578922 ATP7AQ04656 1500 aa29.11■■■□□ 2.25
SMG8-203ENST00000578922 MAP3K4Q9Y6R4 1608 aa29.1■■■□□ 2.25
SMG8-203ENST00000578922 INO80Q9ULG1 1556 aaPredicted RBP29.09■■■□□ 2.25
SMG8-203ENST00000578922 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
SMG8-203ENST00000578922 KDM5DQ9BY66 1539 aa29.08■■■□□ 2.25
SMG8-203ENST00000578922 DIP2BQ9P265 1576 aa29.08■■■□□ 2.25
SMG8-203ENST00000578922 ZNF518AQ6AHZ1 1483 aa29.08■■■□□ 2.25
SMG8-203ENST00000578922 GLI2P10070 1586 aa29.08■■■□□ 2.25
SMG8-203ENST00000578922 PPP1R15AO75807 674 aaPredicted RBP29.06■■■□□ 2.24
SMG8-203ENST00000578922 POGZQ7Z3K3 1410 aa29.05■■■□□ 2.24
SMG8-203ENST00000578922 NEO1Q92859 1461 aa29.05■■■□□ 2.24
SMG8-203ENST00000578922 RAPGEF3O95398 923 aa29.04■■■□□ 2.24
SMG8-203ENST00000578922 FAM135AQ9P2D6 1515 aa29.04■■■□□ 2.24
SMG8-203ENST00000578922 UNC13BO14795 1591 aa29.03■■■□□ 2.24
SMG8-203ENST00000578922 KIDINS220Q9ULH0 1771 aa29■■■□□ 2.23
SMG8-203ENST00000578922 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
SMG8-203ENST00000578922 RPRD2Q5VT52 1461 aaKnown RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms