RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
SREBF1-217ENST00000577897 HECW1Q76N89 1606 aa22.92■■□□□ 1.26
SREBF1-217ENST00000577897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.262e-7■■■□□ 16.2
SREBF1-217ENST00000577897 RANGAP1P46060 587 aaPredicted RBP22.91■■□□□ 1.26
SREBF1-217ENST00000577897 MAGI2Q86UL8 1455 aa22.91■■□□□ 1.26
SREBF1-217ENST00000577897 STRCQ7RTU9 1775 aa22.9■■□□□ 1.26
SREBF1-217ENST00000577897 CEBPAP49715 358 aaPredicted RBP22.89■■□□□ 1.25
SREBF1-217ENST00000577897 ARHGEF12Q9NZN5 1544 aa22.87■■□□□ 1.25
SREBF1-217ENST00000577897 UHRF1BP1Q6BDS2 1440 aa22.83■■□□□ 1.25
SREBF1-217ENST00000577897 SCAPERQ9BY12 1400 aa22.83■■□□□ 1.25
SREBF1-217ENST00000577897 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
SREBF1-217ENST00000577897 ATP10AO60312 1499 aa22.81■■□□□ 1.24
SREBF1-217ENST00000577897 SETD1BQ9UPS6 1966 aaKnown RBP22.8■■□□□ 1.24
SREBF1-217ENST00000577897 PTPRTO14522 1441 aa22.77■■□□□ 1.24
SREBF1-217ENST00000577897 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
SREBF1-217ENST00000577897 PLCH2O75038 1416 aa22.74■■□□□ 1.23
SREBF1-217ENST00000577897 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
SREBF1-217ENST00000577897 LTBP4Q8N2S1 1624 aa22.73■■□□□ 1.23
SREBF1-217ENST00000577897 CSRNP3Q8WYN3 585 aa22.71■■□□□ 1.23
SREBF1-217ENST00000577897 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
SREBF1-217ENST00000577897 MYO5CQ9NQX4 1742 aa22.67■■□□□ 1.22
SREBF1-217ENST00000577897 C3P01024 1663 aa22.66■■□□□ 1.22
SREBF1-217ENST00000577897 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
SREBF1-217ENST00000577897 ZNF518AQ6AHZ1 1483 aa22.65■■□□□ 1.22
SREBF1-217ENST00000577897 ESF1Q9H501 851 aaKnown RBP22.62■■□□□ 1.21
SREBF1-217ENST00000577897 DIP2CQ9Y2E4 1556 aa22.62■■□□□ 1.21
SREBF1-217ENST00000577897 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
SREBF1-217ENST00000577897 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
SREBF1-217ENST00000577897 KDM5CP41229 1560 aa22.6■■□□□ 1.21
SREBF1-217ENST00000577897 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
SREBF1-217ENST00000577897 ARHGAP5Q13017 1502 aa22.59■■□□□ 1.21
SREBF1-217ENST00000577897 UBAP1LF5GYI3 381 aa22.57■■□□□ 1.2
SREBF1-217ENST00000577897 KIF14Q15058 1648 aa22.57■■□□□ 1.2
SREBF1-217ENST00000577897 ABCA6Q8N139 1617 aa22.57■■□□□ 1.2
SREBF1-217ENST00000577897 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
SREBF1-217ENST00000577897 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
SREBF1-217ENST00000577897 CAMSAP1Q5T5Y3 1602 aa22.53■■□□□ 1.2
SREBF1-217ENST00000577897 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-217ENST00000577897 AGLP35573 1532 aa22.49■■□□□ 1.19
SREBF1-217ENST00000577897 CDK11AQ9UQ88 783 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-217ENST00000577897 MED1Q15648 1581 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-217ENST00000577897 NCKAP5LQ9HCH0 1330 aa22.48■■□□□ 1.19
SREBF1-217ENST00000577897 MLH3Q9UHC1 1453 aa22.47■■□□□ 1.19
SREBF1-217ENST00000577897 CNTLNQ9NXG0 1405 aa22.47■■□□□ 1.19
SREBF1-217ENST00000577897 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
SREBF1-217ENST00000577897 EEA1Q15075 1411 aa22.45■■□□□ 1.18
SREBF1-217ENST00000577897 CLIP1P30622 1438 aa22.44■■□□□ 1.18
SREBF1-217ENST00000577897 FMN1Q68DA7 1419 aa22.42■■□□□ 1.18
SREBF1-217ENST00000577897 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
SREBF1-217ENST00000577897 CDC42BPBQ9Y5S2 1711 aa22.42■■□□□ 1.18
SREBF1-217ENST00000577897 ABCC1P33527 1531 aa22.41■■□□□ 1.18
SREBF1-217ENST00000577897 NPATQ14207 1427 aa22.4■■□□□ 1.18
SREBF1-217ENST00000577897 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
SREBF1-217ENST00000577897 MROH2AA6NES4 1674 aa22.39■■□□□ 1.17
SREBF1-217ENST00000577897 KIDINS220Q9ULH0 1771 aa22.38■■□□□ 1.17
SREBF1-217ENST00000577897 SUPT6HQ7KZ85 1726 aaKnown RBP22.38■■□□□ 1.17
SREBF1-217ENST00000577897 HSPA1LP34931 641 aa22.38■■□□□ 1.17
SREBF1-217ENST00000577897 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
SREBF1-217ENST00000577897 PREX2Q70Z35 1606 aa22.37■■□□□ 1.17
SREBF1-217ENST00000577897 ZMYM3Q14202 1370 aa22.37■■□□□ 1.17
SREBF1-217ENST00000577897 MYO3AQ8NEV4 1616 aa22.36■■□□□ 1.17
SREBF1-217ENST00000577897 PIP4K2BP78356 416 aa22.35■■□□□ 1.17
SREBF1-217ENST00000577897 PKD2Q13563 968 aa22.35■■□□□ 1.17
SREBF1-217ENST00000577897 ZNF142P52746 1687 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-217ENST00000577897 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-217ENST00000577897 PLA2R1Q13018 1463 aa22.34■■□□□ 1.17
SREBF1-217ENST00000577897 LRRIQ1Q96JM4 1722 aa22.33■■□□□ 1.17
SREBF1-217ENST00000577897 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
SREBF1-217ENST00000577897 CEP170BQ9Y4F5 1589 aaPredicted RBP22.32■■□□□ 1.16
SREBF1-217ENST00000577897 CLTCQ00610 1675 aaKnown RBP22.32■■□□□ 1.16
SREBF1-217ENST00000577897 TCOF1Q13428 1488 aaKnown RBP22.31■■□□□ 1.16
SREBF1-217ENST00000577897 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
SREBF1-217ENST00000577897 UBTFP17480 764 aaKnown RBP22.29■■□□□ 1.16
SREBF1-217ENST00000577897 SAMD9LQ8IVG5 1584 aa22.28■■□□□ 1.16
SREBF1-217ENST00000577897 TOM1O60784 492 aa22.27■■□□□ 1.16
SREBF1-217ENST00000577897 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-217ENST00000577897 PTPRKQ15262 1439 aa22.24■■□□□ 1.15
SREBF1-217ENST00000577897 CDC42BPAQ5VT25 1732 aa22.24■■□□□ 1.15
SREBF1-217ENST00000577897 SPAG9O60271 1321 aaKnown RBP22.23■■□□□ 1.15
SREBF1-217ENST00000577897 SYCP2Q9BX26 1530 aa22.22■■□□□ 1.15
SREBF1-217ENST00000577897 GGT6Q6P531 493 aa22.21■■□□□ 1.15
SREBF1-217ENST00000577897 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
SREBF1-217ENST00000577897 CPS1P31327 1500 aa22.19■■□□□ 1.14
SREBF1-217ENST00000577897 ATP7AQ04656 1500 aa22.19■■□□□ 1.14
SREBF1-217ENST00000577897 PLXNC1O60486 1568 aa22.17■■□□□ 1.14
SREBF1-217ENST00000577897 A2MP01023 1474 aa22.17■■□□□ 1.14
SREBF1-217ENST00000577897 HNRNPMP52272 730 aaKnown RBP eCLIP22.17■■□□□ 1.14
SREBF1-217ENST00000577897 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
SREBF1-217ENST00000577897 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
SREBF1-217ENST00000577897 A2ML1A8K2U0 1454 aa22.16■■□□□ 1.14
SREBF1-217ENST00000577897 CCDC18Q5T9S5 1454 aa22.16■■□□□ 1.14
SREBF1-217ENST00000577897 POLR1AO95602 1720 aaPredicted RBP22.16■■□□□ 1.14
SREBF1-217ENST00000577897 SHANK2Q9UPX8 1470 aa22.15■■□□□ 1.14
SREBF1-217ENST00000577897 INO80Q9ULG1 1556 aaPredicted RBP22.13■■□□□ 1.13
SREBF1-217ENST00000577897 NEURL4Q96JN8 1562 aa22.12■■□□□ 1.13
SREBF1-217ENST00000577897 CASKIN1Q8WXD9 1431 aa22.09■■□□□ 1.13
SREBF1-217ENST00000577897 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
SREBF1-217ENST00000577897 ALKQ9UM73 1620 aa22.06■■□□□ 1.12
SREBF1-217ENST00000577897 ADGBQ8N7X0 1667 aa22.05■■□□□ 1.12
SREBF1-217ENST00000577897 VWDEQ8N2E2 1590 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms