RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
RPAIN-216ENST00000575599 PLCH2O75038 1416 aa21.12■□□□□ 0.97
RPAIN-216ENST00000575599 AKNAQ7Z591 1439 aa21.11■□□□□ 0.97
RPAIN-216ENST00000575599 VPS8Q8N3P4 1428 aa21.1■□□□□ 0.97
RPAIN-216ENST00000575599 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
RPAIN-216ENST00000575599 ARHGAP5Q13017 1502 aa21.08■□□□□ 0.97
RPAIN-216ENST00000575599 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
RPAIN-216ENST00000575599 MTUS2Q5JR59 1369 aa21.07■□□□□ 0.96
RPAIN-216ENST00000575599 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
RPAIN-216ENST00000575599 ADGRL1O94910 1474 aa21.06■□□□□ 0.96
RPAIN-216ENST00000575599 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
RPAIN-216ENST00000575599 EFCAB2Q5VUJ9 269 aa21.04■□□□□ 0.96
RPAIN-216ENST00000575599 EHBP1L1Q8N3D4 1523 aa21.03■□□□□ 0.96
RPAIN-216ENST00000575599 RICTORQ6R327 1708 aa21.03■□□□□ 0.96
RPAIN-216ENST00000575599 CDC42BPBQ9Y5S2 1711 aa21.03■□□□□ 0.96
RPAIN-216ENST00000575599 CDC42BPAQ5VT25 1732 aa21.01■□□□□ 0.95
RPAIN-216ENST00000575599 SCAPERQ9BY12 1400 aa21.01■□□□□ 0.95
RPAIN-216ENST00000575599 TIAM1Q13009 1591 aa21■□□□□ 0.95
RPAIN-216ENST00000575599 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
RPAIN-216ENST00000575599 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
RPAIN-216ENST00000575599 GPATCH8Q9UKJ3 1502 aaKnown RBP20.96■□□□□ 0.95
RPAIN-216ENST00000575599 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
RPAIN-216ENST00000575599 ZMYM4Q5VZL5 1548 aa20.95■□□□□ 0.94
RPAIN-216ENST00000575599 ARHGEF40Q8TER5 1519 aa20.93■□□□□ 0.94
RPAIN-216ENST00000575599 KDM4FA0A1W2PPD8 638 aa20.93■□□□□ 0.94
RPAIN-216ENST00000575599 SUPT6HQ7KZ85 1726 aaKnown RBP20.92■□□□□ 0.94
RPAIN-216ENST00000575599 ABCC1P33527 1531 aa20.92■□□□□ 0.94
RPAIN-216ENST00000575599 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
RPAIN-216ENST00000575599 ZFYVE16Q7Z3T8 1539 aa20.91■□□□□ 0.94
RPAIN-216ENST00000575599 ZNF518AQ6AHZ1 1483 aa20.9■□□□□ 0.94
RPAIN-216ENST00000575599 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
RPAIN-216ENST00000575599 ITSN2Q9NZM3 1697 aa20.9■□□□□ 0.94
RPAIN-216ENST00000575599 SAMD9LQ8IVG5 1584 aa20.9■□□□□ 0.94
RPAIN-216ENST00000575599 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
RPAIN-216ENST00000575599 NCOA2Q15596 1464 aa20.89■□□□□ 0.93
RPAIN-216ENST00000575599 MAP3K1Q13233 1512 aa20.89■□□□□ 0.93
RPAIN-216ENST00000575599 YEATS2Q9ULM3 1422 aa20.88■□□□□ 0.93
RPAIN-216ENST00000575599 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
RPAIN-216ENST00000575599 MAGI2Q86UL8 1455 aa20.87■□□□□ 0.93
RPAIN-216ENST00000575599 KDM5CP41229 1560 aa20.87■□□□□ 0.93
RPAIN-216ENST00000575599 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
RPAIN-216ENST00000575599 SYCP2Q9BX26 1530 aa20.86■□□□□ 0.93
RPAIN-216ENST00000575599 TRAPPC8Q9Y2L5 1435 aa20.86■□□□□ 0.93
RPAIN-216ENST00000575599 APLP2Q06481 763 aa20.85■□□□□ 0.93
RPAIN-216ENST00000575599 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
RPAIN-216ENST00000575599 MYT1LQ9UL68 1186 aa20.85■□□□□ 0.93
RPAIN-216ENST00000575599 HECW2Q9P2P5 1572 aa20.84■□□□□ 0.93
RPAIN-216ENST00000575599 ARID4BQ4LE39 1312 aaPredicted RBP20.83■□□□□ 0.93
RPAIN-216ENST00000575599 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
RPAIN-216ENST00000575599 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.92
RPAIN-216ENST00000575599 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
RPAIN-216ENST00000575599 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
RPAIN-216ENST00000575599 SIGLEC1Q9BZZ2 1709 aa20.78■□□□□ 0.92
RPAIN-216ENST00000575599 ATP10AO60312 1499 aa20.78■□□□□ 0.92
RPAIN-216ENST00000575599 MLH3Q9UHC1 1453 aa20.77■□□□□ 0.92
RPAIN-216ENST00000575599 BCORL1Q5H9F3 1711 aa20.77■□□□□ 0.91
RPAIN-216ENST00000575599 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.91
RPAIN-216ENST00000575599 ABCA6Q8N139 1617 aa20.76■□□□□ 0.91
RPAIN-216ENST00000575599 DIP2CQ9Y2E4 1556 aa20.76■□□□□ 0.91
RPAIN-216ENST00000575599 CAMSAP2Q08AD1 1489 aa20.74■□□□□ 0.91
RPAIN-216ENST00000575599 KIDINS220Q9ULH0 1771 aa20.74■□□□□ 0.91
RPAIN-216ENST00000575599 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
RPAIN-216ENST00000575599 SPAG9O60271 1321 aaKnown RBP20.72■□□□□ 0.91
RPAIN-216ENST00000575599 MADDQ8WXG6 1647 aa20.71■□□□□ 0.91
RPAIN-216ENST00000575599 MBD5Q9P267 1494 aa20.7■□□□□ 0.9
RPAIN-216ENST00000575599 MYOM3Q5VTT5 1437 aa20.7■□□□□ 0.9
RPAIN-216ENST00000575599 ATP7AQ04656 1500 aa20.7■□□□□ 0.9
RPAIN-216ENST00000575599 MLECQ14165 292 aa20.7■□□□□ 0.9
RPAIN-216ENST00000575599 INO80Q9ULG1 1556 aaPredicted RBP20.7■□□□□ 0.9
RPAIN-216ENST00000575599 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
RPAIN-216ENST00000575599 CCDC141Q6ZP82 1450 aa20.66■□□□□ 0.9
RPAIN-216ENST00000575599 RIMS1Q86UR5 1692 aaKnown RBP20.66■□□□□ 0.9
RPAIN-216ENST00000575599 MIA2Q96PC5 1412 aa20.65■□□□□ 0.9
RPAIN-216ENST00000575599 PTPRMP28827 1452 aa20.64■□□□□ 0.89
RPAIN-216ENST00000575599 FER1L4A9Z1Z3 1794 aa20.63■□□□□ 0.89
RPAIN-216ENST00000575599 ARHGEF5Q12774 1597 aa20.63■□□□□ 0.89
RPAIN-216ENST00000575599 AGLP35573 1532 aa20.6■□□□□ 0.89
RPAIN-216ENST00000575599 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
RPAIN-216ENST00000575599 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
RPAIN-216ENST00000575599 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
RPAIN-216ENST00000575599 ADGBQ8N7X0 1667 aa20.59■□□□□ 0.89
RPAIN-216ENST00000575599 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.89
RPAIN-216ENST00000575599 A2MP01023 1474 aa20.58■□□□□ 0.89
RPAIN-216ENST00000575599 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.88
RPAIN-216ENST00000575599 PLXNC1O60486 1568 aa20.57■□□□□ 0.88
RPAIN-216ENST00000575599 TSPY4P0CV99 314 aa20.55■□□□□ 0.88
RPAIN-216ENST00000575599 TSPY10P0CW01 314 aa20.55■□□□□ 0.88
RPAIN-216ENST00000575599 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
RPAIN-216ENST00000575599 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
RPAIN-216ENST00000575599 MAST1Q9Y2H9 1570 aa20.52■□□□□ 0.87
RPAIN-216ENST00000575599 RNF39Q9H2S5 420 aa20.51■□□□□ 0.87
RPAIN-216ENST00000575599 CROCC2H7BZ55 1655 aa20.5■□□□□ 0.87
RPAIN-216ENST00000575599 ESF1Q9H501 851 aaKnown RBP20.49■□□□□ 0.87
RPAIN-216ENST00000575599 DHX29Q7Z478 1369 aaKnown RBP20.49■□□□□ 0.87
RPAIN-216ENST00000575599 DNMT1P26358 1616 aaKnown RBP20.49■□□□□ 0.87
RPAIN-216ENST00000575599 ABCC5O15440 1437 aa20.48■□□□□ 0.87
RPAIN-216ENST00000575599 DAPK1P53355 1430 aa20.48■□□□□ 0.87
RPAIN-216ENST00000575599 FAM50AQ14320 339 aaKnown RBP20.46■□□□□ 0.87
RPAIN-216ENST00000575599 SHANK2Q9UPX8 1470 aa20.46■□□□□ 0.87
RPAIN-216ENST00000575599 CEBPAP49715 358 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms