RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 GPHNQ9NQX3 736 aaPredicted RBP15.56■□□□□ 0.08
CALCOCO2-226ENST00000575461 SPDYE16A6NNV3 312 aaPredicted RBP15.55■□□□□ 0.08
CALCOCO2-226ENST00000575461 GPBP1L1Q9HC44 474 aaPredicted RBP15.52■□□□□ 0.08
CALCOCO2-226ENST00000575461 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
CALCOCO2-226ENST00000575461 KDM4CQ9H3R0 1056 aa15.5■□□□□ 0.07
CALCOCO2-226ENST00000575461 ILDR1Q86SU0 546 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO2-226ENST00000575461 TRIM66O15016 1216 aa15.47■□□□□ 0.07
CALCOCO2-226ENST00000575461 PDIA6Q15084 440 aa15.47■□□□□ 0.07
CALCOCO2-226ENST00000575461 IL27Q8NEV9 243 aa15.47■□□□□ 0.07
CALCOCO2-226ENST00000575461 DPYSL4O14531 572 aa15.46■□□□□ 0.07
CALCOCO2-226ENST00000575461 PDE4DQ08499 809 aa15.46■□□□□ 0.07
CALCOCO2-226ENST00000575461 MS4A3Q96HJ5 214 aa15.44■□□□□ 0.06
CALCOCO2-226ENST00000575461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.064e-16■■■■■ 82.3
CALCOCO2-226ENST00000575461 TIE1P35590 1138 aa15.43■□□□□ 0.06
CALCOCO2-226ENST00000575461 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
CALCOCO2-226ENST00000575461 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
CALCOCO2-226ENST00000575461 DSG2Q14126 1118 aa15.39■□□□□ 0.05
CALCOCO2-226ENST00000575461 ZMYND15Q9H091 742 aa15.39■□□□□ 0.05
CALCOCO2-226ENST00000575461 TMC2Q8TDI7 906 aa15.37■□□□□ 0.05
CALCOCO2-226ENST00000575461 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
CALCOCO2-226ENST00000575461 FOXK1P85037 733 aa15.36■□□□□ 0.05
CALCOCO2-226ENST00000575461 GPR37O15354 613 aa15.34■□□□□ 0.05
CALCOCO2-226ENST00000575461 MINK1Q8N4C8 1332 aaPredicted RBP15.34■□□□□ 0.05
CALCOCO2-226ENST00000575461 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
CALCOCO2-226ENST00000575461 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
CALCOCO2-226ENST00000575461 MAP2K5Q13163 448 aa15.28■□□□□ 0.04
CALCOCO2-226ENST00000575461 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
CALCOCO2-226ENST00000575461 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
CALCOCO2-226ENST00000575461 PLPP6Q8IY26 295 aa15.26■□□□□ 0.03
CALCOCO2-226ENST00000575461 FAM117AQ9C073 453 aa15.25■□□□□ 0.03
CALCOCO2-226ENST00000575461 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
CALCOCO2-226ENST00000575461 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
CALCOCO2-226ENST00000575461 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
CALCOCO2-226ENST00000575461 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
CALCOCO2-226ENST00000575461 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
CALCOCO2-226ENST00000575461 MAP3K9P80192 1104 aa15.23■□□□□ 0.03
CALCOCO2-226ENST00000575461 AMHR2Q16671 573 aa15.23■□□□□ 0.03
CALCOCO2-226ENST00000575461 GRXCR2A6NFK2 248 aa15.22■□□□□ 0.03
CALCOCO2-226ENST00000575461 IRF6O14896 467 aa15.22■□□□□ 0.03
CALCOCO2-226ENST00000575461 CCDC102AQ96A19 550 aa15.22■□□□□ 0.03
CALCOCO2-226ENST00000575461 GNPATO15228 680 aa15.19■□□□□ 0.02
CALCOCO2-226ENST00000575461 TMEM121BQ9BXQ6 578 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO2-226ENST00000575461 FCHSD2O94868 740 aa15.17■□□□□ 0.02
CALCOCO2-226ENST00000575461 HIC1Q14526 733 aa15.17■□□□□ 0.02
CALCOCO2-226ENST00000575461 PLEKHG3A1L390 1219 aa15.16■□□□□ 0.02
CALCOCO2-226ENST00000575461 C2orf72A6NCS6 295 aa15.16■□□□□ 0.02
CALCOCO2-226ENST00000575461 G3V3G9 751 aa15.16■□□□□ 0.02
CALCOCO2-226ENST00000575461 KIF3CO14782 793 aa15.16■□□□□ 0.02
CALCOCO2-226ENST00000575461 PDCD7Q8N8D1 485 aaKnown RBP15.16■□□□□ 0.02
CALCOCO2-226ENST00000575461 OSBPP22059 807 aa15.15■□□□□ 0.02
CALCOCO2-226ENST00000575461 BOLA1Q9Y3E2 137 aa15.15■□□□□ 0.02
CALCOCO2-226ENST00000575461 PTGER2P43116 358 aa15.14■□□□□ 0.01
CALCOCO2-226ENST00000575461 FLIIQ13045 1269 aa15.14■□□□□ 0.01
CALCOCO2-226ENST00000575461 PARP9Q8IXQ6 854 aa15.14■□□□□ 0.01
CALCOCO2-226ENST00000575461 GOPCQ9HD26 462 aa15.13■□□□□ 0.01
CALCOCO2-226ENST00000575461 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
CALCOCO2-226ENST00000575461 CLCN6P51797 869 aa15.1■□□□□ 0.01
CALCOCO2-226ENST00000575461 OCEL1Q9H607 264 aa15.1■□□□□ 0.01
CALCOCO2-226ENST00000575461 TBC1D12O60347 775 aa15.07■□□□□ 0
CALCOCO2-226ENST00000575461 IRX5P78411 483 aaPredicted RBP15.07■□□□□ 0
CALCOCO2-226ENST00000575461 IER5LQ5T953 404 aa15.07■□□□□ 0
CALCOCO2-226ENST00000575461 OXER1Q8TDS5 423 aa15.07■□□□□ 0
CALCOCO2-226ENST00000575461 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
CALCOCO2-226ENST00000575461 TTLL12Q14166 644 aaPredicted RBP15.05■□□□□ -0
CALCOCO2-226ENST00000575461 UPF1Q92900 1129 aaKnown RBP eCLIP15.05■□□□□ -0
CALCOCO2-226ENST00000575461 DDX12PQ92771 950 aa15.03■□□□□ -0
CALCOCO2-226ENST00000575461 FECHP22830 423 aa15.02■□□□□ -0
CALCOCO2-226ENST00000575461 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
CALCOCO2-226ENST00000575461 ATN1P54259 1190 aaPredicted RBP15□□□□□ -0.01
CALCOCO2-226ENST00000575461 PTGDRQ13258 359 aa15□□□□□ -0.01
CALCOCO2-226ENST00000575461 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
CALCOCO2-226ENST00000575461 PCMTD1Q96MG8 357 aaPredicted RBP14.99□□□□□ -0.01
CALCOCO2-226ENST00000575461 EVI5O60447 810 aa14.96□□□□□ -0.01
CALCOCO2-226ENST00000575461 PLCG2P16885 1265 aa14.96□□□□□ -0.01
CALCOCO2-226ENST00000575461 GIGYF2Q6Y7W6 1299 aaKnown RBP14.96□□□□□ -0.01
CALCOCO2-226ENST00000575461 ARID3AQ99856 593 aa14.95□□□□□ -0.02
CALCOCO2-226ENST00000575461 C1orf115Q9H7X2 142 aa14.95□□□□□ -0.02
CALCOCO2-226ENST00000575461 ATMINO43313 823 aaPredicted RBP14.94□□□□□ -0.02
CALCOCO2-226ENST00000575461 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
CALCOCO2-226ENST00000575461 A6NJR5 290 aa14.92□□□□□ -0.02
CALCOCO2-226ENST00000575461 APBB1O00213 710 aa14.92□□□□□ -0.02
CALCOCO2-226ENST00000575461 ASTLQ6HA08 431 aaPredicted RBP14.92□□□□□ -0.02
CALCOCO2-226ENST00000575461 MS4A1P11836 297 aa14.91□□□□□ -0.02
CALCOCO2-226ENST00000575461 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
CALCOCO2-226ENST00000575461 CLCN1P35523 988 aa14.89□□□□□ -0.03
CALCOCO2-226ENST00000575461 TMEM92Q6UXU6 159 aa14.89□□□□□ -0.03
CALCOCO2-226ENST00000575461 SH3D19Q5HYK7 790 aa14.88□□□□□ -0.03
CALCOCO2-226ENST00000575461 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
CALCOCO2-226ENST00000575461 PTCD2Q8WV60 388 aaKnown RBP14.86□□□□□ -0.03
CALCOCO2-226ENST00000575461 EPAS1Q99814 870 aa14.85□□□□□ -0.03
CALCOCO2-226ENST00000575461 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
CALCOCO2-226ENST00000575461 TMUB1Q9BVT8 246 aa14.84□□□□□ -0.03
CALCOCO2-226ENST00000575461 REPIN1Q9BWE0 567 aaKnown RBP14.84□□□□□ -0.03
CALCOCO2-226ENST00000575461 GPCPD1Q9NPB8 672 aa14.83□□□□□ -0.04
CALCOCO2-226ENST00000575461 TRAK2O60296 914 aa14.82□□□□□ -0.04
CALCOCO2-226ENST00000575461 PHF14O94880 888 aa14.82□□□□□ -0.04
CALCOCO2-226ENST00000575461 EN1Q05925 392 aaPredicted RBP14.82□□□□□ -0.04
CALCOCO2-226ENST00000575461 TRIM26Q12899 539 aaPredicted RBP14.82□□□□□ -0.04
CALCOCO2-226ENST00000575461 SKIV2LQ15477 1246 aaKnown RBP14.8□□□□□ -0.04
CALCOCO2-226ENST00000575461 NPDC1Q9NQX5 325 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms