RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
TFAP4-206ENST00000575320 GOLGA6L4A6NEF3 574 aa17.84■□□□□ 0.45
TFAP4-206ENST00000575320 GOLGA3Q08378 1498 aa17.83■□□□□ 0.44
TFAP4-206ENST00000575320 DRC7Q8IY82 874 aa17.82■□□□□ 0.44
TFAP4-206ENST00000575320 SIN3AQ96ST3 1273 aa17.82■□□□□ 0.44
TFAP4-206ENST00000575320 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
TFAP4-206ENST00000575320 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
TFAP4-206ENST00000575320 SRPK2P78362 688 aaKnown RBP17.78■□□□□ 0.44
TFAP4-206ENST00000575320 WRNQ14191 1432 aaPredicted RBP eCLIP17.77■□□□□ 0.44
TFAP4-206ENST00000575320 ISY1Q9ULR0 285 aaKnown RBP17.77■□□□□ 0.44
TFAP4-206ENST00000575320 G3V3G9 751 aa17.77■□□□□ 0.44
TFAP4-206ENST00000575320 DCAF8Q5TAQ9 597 aa17.77■□□□□ 0.44
TFAP4-206ENST00000575320 U2SURPO15042 1029 aaKnown RBP17.77■□□□□ 0.43
TFAP4-206ENST00000575320 FOXD1Q16676 465 aa17.76■□□□□ 0.43
TFAP4-206ENST00000575320 MCCP23508 829 aa17.75■□□□□ 0.43
TFAP4-206ENST00000575320 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
TFAP4-206ENST00000575320 ARID3AQ99856 593 aa17.73■□□□□ 0.43
TFAP4-206ENST00000575320 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.73■□□□□ 0.43
TFAP4-206ENST00000575320 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
TFAP4-206ENST00000575320 MSH5O43196 834 aa17.7■□□□□ 0.42
TFAP4-206ENST00000575320 STK26Q9P289 416 aa17.7■□□□□ 0.42
TFAP4-206ENST00000575320 GZF1Q9H116 711 aaPredicted RBP17.7■□□□□ 0.42
TFAP4-206ENST00000575320 SAFB2Q14151 953 aaKnown RBP eCLIP17.69■□□□□ 0.42
TFAP4-206ENST00000575320 EFCAB2Q5VUJ9 269 aa17.69■□□□□ 0.42
TFAP4-206ENST00000575320 EEA1Q15075 1411 aa17.69■□□□□ 0.42
TFAP4-206ENST00000575320 CLSTN1O94985 981 aa17.68■□□□□ 0.42
TFAP4-206ENST00000575320 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
TFAP4-206ENST00000575320 GBP4Q96PP9 640 aa17.67■□□□□ 0.42
TFAP4-206ENST00000575320 PTMSP20962 102 aa17.67■□□□□ 0.42
TFAP4-206ENST00000575320 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
TFAP4-206ENST00000575320 TMF1P82094 1093 aa17.66■□□□□ 0.42
TFAP4-206ENST00000575320 HDGFL2Q7Z4V5 671 aaPredicted RBP17.66■□□□□ 0.42
TFAP4-206ENST00000575320 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
TFAP4-206ENST00000575320 CFAP44Q96MT7 982 aa17.65■□□□□ 0.42
TFAP4-206ENST00000575320 CUX2O14529 1486 aa17.64■□□□□ 0.41
TFAP4-206ENST00000575320 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
TFAP4-206ENST00000575320 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
TFAP4-206ENST00000575320 EVA1CP58658 441 aa17.62■□□□□ 0.41
TFAP4-206ENST00000575320 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
TFAP4-206ENST00000575320 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
TFAP4-206ENST00000575320 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
TFAP4-206ENST00000575320 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
TFAP4-206ENST00000575320 APBB1O00213 710 aa17.59■□□□□ 0.41
TFAP4-206ENST00000575320 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
TFAP4-206ENST00000575320 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
TFAP4-206ENST00000575320 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.4
TFAP4-206ENST00000575320 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
TFAP4-206ENST00000575320 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
TFAP4-206ENST00000575320 TNNT3P45378 269 aaPredicted RBP17.57■□□□□ 0.4
TFAP4-206ENST00000575320 MORC1Q86VD1 984 aa17.57■□□□□ 0.4
TFAP4-206ENST00000575320 SOGA1O94964 1423 aa17.57■□□□□ 0.4
TFAP4-206ENST00000575320 KIAA1211Q6ZU35 1233 aa17.56■□□□□ 0.4
TFAP4-206ENST00000575320 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
TFAP4-206ENST00000575320 HSPA5P11021 654 aaKnown RBP17.56■□□□□ 0.4
TFAP4-206ENST00000575320 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
TFAP4-206ENST00000575320 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
TFAP4-206ENST00000575320 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
TFAP4-206ENST00000575320 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
TFAP4-206ENST00000575320 SYAP1Q96A49 352 aaPredicted RBP17.55■□□□□ 0.4
TFAP4-206ENST00000575320 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
TFAP4-206ENST00000575320 SF3B2Q13435 895 aaKnown RBP17.54■□□□□ 0.4
TFAP4-206ENST00000575320 IPO9Q96P70 1041 aaKnown RBP17.53■□□□□ 0.4
TFAP4-206ENST00000575320 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
TFAP4-206ENST00000575320 IPO8O15397 1037 aaKnown RBP17.53■□□□□ 0.4
TFAP4-206ENST00000575320 NOC3LQ8WTT2 800 aaKnown RBP17.53■□□□□ 0.4
TFAP4-206ENST00000575320 KTN1Q86UP2 1357 aaKnown RBP17.52■□□□□ 0.4
TFAP4-206ENST00000575320 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.39
TFAP4-206ENST00000575320 ITPRIPQ8IWB1 547 aa17.52■□□□□ 0.39
TFAP4-206ENST00000575320 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.39
TFAP4-206ENST00000575320 MFAP1P55081 439 aaKnown RBP17.51■□□□□ 0.39
TFAP4-206ENST00000575320 KIF3BO15066 747 aa17.51■□□□□ 0.39
TFAP4-206ENST00000575320 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
TFAP4-206ENST00000575320 TPM4P67936 248 aa17.49■□□□□ 0.39
TFAP4-206ENST00000575320 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
TFAP4-206ENST00000575320 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
TFAP4-206ENST00000575320 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
TFAP4-206ENST00000575320 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
TFAP4-206ENST00000575320 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
TFAP4-206ENST00000575320 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
TFAP4-206ENST00000575320 GOLGA6L1Q8N7Z2 621 aa17.45■□□□□ 0.38
TFAP4-206ENST00000575320 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
TFAP4-206ENST00000575320 KRI1Q8N9T8 703 aaKnown RBP17.44■□□□□ 0.38
TFAP4-206ENST00000575320 HSP90B1P14625 803 aaKnown RBP17.44■□□□□ 0.38
TFAP4-206ENST00000575320 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
TFAP4-206ENST00000575320 CHMP4AQ9BY43 222 aa17.42■□□□□ 0.38
TFAP4-206ENST00000575320 HSP90AA2PQ14568 343 aaPredicted RBP17.41■□□□□ 0.38
TFAP4-206ENST00000575320 RALBP1Q15311 655 aa17.41■□□□□ 0.38
TFAP4-206ENST00000575320 ATF3P18847 181 aa17.4■□□□□ 0.38
TFAP4-206ENST00000575320 CSPP1Q1MSJ5 1256 aa17.4■□□□□ 0.38
TFAP4-206ENST00000575320 AMPHP49418 695 aa17.4■□□□□ 0.38
TFAP4-206ENST00000575320 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
TFAP4-206ENST00000575320 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
TFAP4-206ENST00000575320 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.37
TFAP4-206ENST00000575320 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
TFAP4-206ENST00000575320 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
TFAP4-206ENST00000575320 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
TFAP4-206ENST00000575320 NOL8Q76FK4 1167 aaKnown RBP17.38■□□□□ 0.37
TFAP4-206ENST00000575320 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
TFAP4-206ENST00000575320 GORABQ5T7V8 394 aa17.38■□□□□ 0.37
TFAP4-206ENST00000575320 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms