RNA–Protein interactions for RNA: ENST00000573001.5

TNFRSF12A-204, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3 BASIC

Gene TNFRSF12A, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-204ENST00000573001 HECW1Q76N89 1606 aa21.33■■□□□ 1.01
TNFRSF12A-204ENST00000573001 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
TNFRSF12A-204ENST00000573001 STRCQ7RTU9 1775 aa21.3■■□□□ 1
TNFRSF12A-204ENST00000573001 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
TNFRSF12A-204ENST00000573001 ATP10AO60312 1499 aa21.27■■□□□ 1
TNFRSF12A-204ENST00000573001 SCAPERQ9BY12 1400 aa21.27■■□□□ 1
TNFRSF12A-204ENST00000573001 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF12A-204ENST00000573001 SPATA31D1Q6ZQQ2 1576 aa21.24■□□□□ 0.99
TNFRSF12A-204ENST00000573001 PLCH2O75038 1416 aa21.24■□□□□ 0.99
TNFRSF12A-204ENST00000573001 C9orf84Q5VXU9 1444 aa21.24■□□□□ 0.99
TNFRSF12A-204ENST00000573001 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
TNFRSF12A-204ENST00000573001 SETD1BQ9UPS6 1966 aaKnown RBP21.21■□□□□ 0.99
TNFRSF12A-204ENST00000573001 PTPRTO14522 1441 aa21.21■□□□□ 0.99
TNFRSF12A-204ENST00000573001 UHRF1BP1Q6BDS2 1440 aa21.21■□□□□ 0.99
TNFRSF12A-204ENST00000573001 LTBP4Q8N2S1 1624 aa21.16■□□□□ 0.98
TNFRSF12A-204ENST00000573001 RANGAP1P46060 587 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF12A-204ENST00000573001 CDK13Q14004 1512 aaKnown RBP21.15■□□□□ 0.98
TNFRSF12A-204ENST00000573001 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
TNFRSF12A-204ENST00000573001 EFCAB2Q5VUJ9 269 aa21.13■□□□□ 0.97
TNFRSF12A-204ENST00000573001 ZNF518AQ6AHZ1 1483 aa21.11■□□□□ 0.97
TNFRSF12A-204ENST00000573001 KDM5CP41229 1560 aa21.1■□□□□ 0.97
TNFRSF12A-204ENST00000573001 AFAP1Q8N556 730 aa21.08■□□□□ 0.97
TNFRSF12A-204ENST00000573001 REREQ9P2R6 1566 aa21.08■□□□□ 0.97
TNFRSF12A-204ENST00000573001 MYO5CQ9NQX4 1742 aa21.07■□□□□ 0.96
TNFRSF12A-204ENST00000573001 DIP2CQ9Y2E4 1556 aa21.06■□□□□ 0.96
TNFRSF12A-204ENST00000573001 C3P01024 1663 aa21.06■□□□□ 0.96
TNFRSF12A-204ENST00000573001 NCOA1Q15788 1441 aa21.05■□□□□ 0.96
TNFRSF12A-204ENST00000573001 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
TNFRSF12A-204ENST00000573001 EEA1Q15075 1411 aa21.03■□□□□ 0.96
TNFRSF12A-204ENST00000573001 AGLP35573 1532 aa21.02■□□□□ 0.96
TNFRSF12A-204ENST00000573001 MLH3Q9UHC1 1453 aa21.01■□□□□ 0.95
TNFRSF12A-204ENST00000573001 KIF14Q15058 1648 aa21■□□□□ 0.95
TNFRSF12A-204ENST00000573001 ABCA6Q8N139 1617 aa21■□□□□ 0.95
TNFRSF12A-204ENST00000573001 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
TNFRSF12A-204ENST00000573001 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF12A-204ENST00000573001 TROQ12816 1431 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF12A-204ENST00000573001 CNTLNQ9NXG0 1405 aa20.95■□□□□ 0.95
TNFRSF12A-204ENST00000573001 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
TNFRSF12A-204ENST00000573001 ESF1Q9H501 851 aaKnown RBP20.94■□□□□ 0.94
TNFRSF12A-204ENST00000573001 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
TNFRSF12A-204ENST00000573001 NPATQ14207 1427 aa20.93■□□□□ 0.94
TNFRSF12A-204ENST00000573001 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
TNFRSF12A-204ENST00000573001 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF12A-204ENST00000573001 CDC42BPBQ9Y5S2 1711 aa20.9■□□□□ 0.94
TNFRSF12A-204ENST00000573001 UBAP1LF5GYI3 381 aa20.9■□□□□ 0.94
TNFRSF12A-204ENST00000573001 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF12A-204ENST00000573001 ABCC1P33527 1531 aa20.89■□□□□ 0.94
TNFRSF12A-204ENST00000573001 CLIP1P30622 1438 aa20.88■□□□□ 0.93
TNFRSF12A-204ENST00000573001 KIDINS220Q9ULH0 1771 aa20.87■□□□□ 0.93
TNFRSF12A-204ENST00000573001 NCKAP5LQ9HCH0 1330 aa20.87■□□□□ 0.93
TNFRSF12A-204ENST00000573001 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
TNFRSF12A-204ENST00000573001 MROH2AA6NES4 1674 aa20.86■□□□□ 0.93
TNFRSF12A-204ENST00000573001 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
TNFRSF12A-204ENST00000573001 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
TNFRSF12A-204ENST00000573001 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
TNFRSF12A-204ENST00000573001 PREX2Q70Z35 1606 aa20.84■□□□□ 0.93
TNFRSF12A-204ENST00000573001 PKD2Q13563 968 aa20.83■□□□□ 0.93
TNFRSF12A-204ENST00000573001 TCOF1Q13428 1488 aaKnown RBP20.82■□□□□ 0.92
TNFRSF12A-204ENST00000573001 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
TNFRSF12A-204ENST00000573001 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF12A-204ENST00000573001 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.92
TNFRSF12A-204ENST00000573001 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.92
TNFRSF12A-204ENST00000573001 PTPRKQ15262 1439 aa20.77■□□□□ 0.91
TNFRSF12A-204ENST00000573001 MED1Q15648 1581 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF12A-204ENST00000573001 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF12A-204ENST00000573001 HSPA1LP34931 641 aa20.75■□□□□ 0.91
TNFRSF12A-204ENST00000573001 UBTFP17480 764 aaKnown RBP20.73■□□□□ 0.91
TNFRSF12A-204ENST00000573001 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
TNFRSF12A-204ENST00000573001 CDC42BPAQ5VT25 1732 aa20.72■□□□□ 0.91
TNFRSF12A-204ENST00000573001 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
TNFRSF12A-204ENST00000573001 CLTCQ00610 1675 aaKnown RBP20.71■□□□□ 0.91
TNFRSF12A-204ENST00000573001 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
TNFRSF12A-204ENST00000573001 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
TNFRSF12A-204ENST00000573001 CCDC18Q5T9S5 1454 aa20.68■□□□□ 0.9
TNFRSF12A-204ENST00000573001 SYCP2Q9BX26 1530 aa20.68■□□□□ 0.9
TNFRSF12A-204ENST00000573001 CASKIN1Q8WXD9 1431 aa20.67■□□□□ 0.9
TNFRSF12A-204ENST00000573001 TOM1O60784 492 aa20.66■□□□□ 0.9
TNFRSF12A-204ENST00000573001 A2ML1A8K2U0 1454 aa20.66■□□□□ 0.9
TNFRSF12A-204ENST00000573001 A2MP01023 1474 aa20.66■□□□□ 0.9
TNFRSF12A-204ENST00000573001 ATP7AQ04656 1500 aa20.66■□□□□ 0.9
TNFRSF12A-204ENST00000573001 CPS1P31327 1500 aa20.65■□□□□ 0.9
TNFRSF12A-204ENST00000573001 PIP4K2BP78356 416 aa20.65■□□□□ 0.9
TNFRSF12A-204ENST00000573001 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
TNFRSF12A-204ENST00000573001 INO80Q9ULG1 1556 aaPredicted RBP20.64■□□□□ 0.9
TNFRSF12A-204ENST00000573001 GPATCH8Q9UKJ3 1502 aaKnown RBP20.64■□□□□ 0.9
TNFRSF12A-204ENST00000573001 KIAA1107Q9UPP5 1409 aa20.64■□□□□ 0.89
TNFRSF12A-204ENST00000573001 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
TNFRSF12A-204ENST00000573001 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.89
TNFRSF12A-204ENST00000573001 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF12A-204ENST00000573001 DNMT1P26358 1616 aaKnown RBP20.64■□□□□ 0.89
TNFRSF12A-204ENST00000573001 GGT6Q6P531 493 aa20.62■□□□□ 0.89
TNFRSF12A-204ENST00000573001 NEURL4Q96JN8 1562 aa20.62■□□□□ 0.89
TNFRSF12A-204ENST00000573001 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
TNFRSF12A-204ENST00000573001 ALKQ9UM73 1620 aa20.59■□□□□ 0.89
TNFRSF12A-204ENST00000573001 PLEKHH2Q8IVE3 1493 aa20.58■□□□□ 0.89
TNFRSF12A-204ENST00000573001 POLR1AO95602 1720 aaPredicted RBP20.57■□□□□ 0.88
TNFRSF12A-204ENST00000573001 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
TNFRSF12A-204ENST00000573001 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF12A-204ENST00000573001 CFDP1Q9UEE9 299 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF12A-204ENST00000573001 FYCO1Q9BQS8 1478 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms