RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 FER1L4A9Z1Z3 1794 aa24.9■■□□□ 1.58
USB1-214ENST00000568848 KIF14Q15058 1648 aa24.9■■□□□ 1.58
USB1-214ENST00000568848 POGZQ7Z3K3 1410 aa24.88■■□□□ 1.57
USB1-214ENST00000568848 PLCH2O75038 1416 aa24.86■■□□□ 1.57
USB1-214ENST00000568848 CEBPAP49715 358 aaPredicted RBP24.85■■□□□ 1.57
USB1-214ENST00000568848 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
USB1-214ENST00000568848 ARHGAP35Q9NRY4 1499 aa24.83■■□□□ 1.56
USB1-214ENST00000568848 MYO5CQ9NQX4 1742 aa24.82■■□□□ 1.56
USB1-214ENST00000568848 LRRIQ1Q96JM4 1722 aa24.81■■□□□ 1.56
USB1-214ENST00000568848 MAGI2Q86UL8 1455 aa24.79■■□□□ 1.56
USB1-214ENST00000568848 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
USB1-214ENST00000568848 ATP10AO60312 1499 aa24.77■■□□□ 1.56
USB1-214ENST00000568848 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
USB1-214ENST00000568848 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
USB1-214ENST00000568848 ARHGAP5Q13017 1502 aa24.74■■□□□ 1.55
USB1-214ENST00000568848 EFCAB2Q5VUJ9 269 aa24.73■■□□□ 1.55
USB1-214ENST00000568848 CERKQ8TCT0 537 aa24.73■■□□□ 1.55
USB1-214ENST00000568848 FMN1Q68DA7 1419 aa24.71■■□□□ 1.55
USB1-214ENST00000568848 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.54
USB1-214ENST00000568848 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
USB1-214ENST00000568848 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
USB1-214ENST00000568848 DIP2CQ9Y2E4 1556 aa24.69■■□□□ 1.54
USB1-214ENST00000568848 ABCA6Q8N139 1617 aa24.68■■□□□ 1.54
USB1-214ENST00000568848 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
USB1-214ENST00000568848 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
USB1-214ENST00000568848 KDM5CP41229 1560 aa24.67■■□□□ 1.54
USB1-214ENST00000568848 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
USB1-214ENST00000568848 TRAPPC8Q9Y2L5 1435 aa24.63■■□□□ 1.53
USB1-214ENST00000568848 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
USB1-214ENST00000568848 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
USB1-214ENST00000568848 C3P01024 1663 aa24.59■■□□□ 1.53
USB1-214ENST00000568848 CLIP1P30622 1438 aa24.59■■□□□ 1.53
USB1-214ENST00000568848 PREX2Q70Z35 1606 aa24.58■■□□□ 1.53
USB1-214ENST00000568848 ABCC1P33527 1531 aa24.57■■□□□ 1.52
USB1-214ENST00000568848 ITSN2Q9NZM3 1697 aa24.57■■□□□ 1.52
USB1-214ENST00000568848 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
USB1-214ENST00000568848 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
USB1-214ENST00000568848 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
USB1-214ENST00000568848 MLH3Q9UHC1 1453 aa24.51■■□□□ 1.51
USB1-214ENST00000568848 REREQ9P2R6 1566 aa24.5■■□□□ 1.51
USB1-214ENST00000568848 ILDR2Q71H61 639 aa24.49■■□□□ 1.51
USB1-214ENST00000568848 ZNF777Q9ULD5 760 aaPredicted RBP24.49■■□□□ 1.51
USB1-214ENST00000568848 CASKIN1Q8WXD9 1431 aa24.48■■□□□ 1.51
USB1-214ENST00000568848 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
USB1-214ENST00000568848 SETD1BQ9UPS6 1966 aaKnown RBP24.45■■□□□ 1.51
USB1-214ENST00000568848 AGLP35573 1532 aa24.45■■□□□ 1.5
USB1-214ENST00000568848 SYCP2Q9BX26 1530 aa24.44■■□□□ 1.5
USB1-214ENST00000568848 DISP3Q9P2K9 1392 aa24.43■■□□□ 1.5
USB1-214ENST00000568848 CCDC18Q5T9S5 1454 aa24.43■■□□□ 1.5
USB1-214ENST00000568848 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
USB1-214ENST00000568848 HNRNPMP52272 730 aaKnown RBP eCLIP24.41■■□□□ 1.5
USB1-214ENST00000568848 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
USB1-214ENST00000568848 LTBP4Q8N2S1 1624 aa24.4■■□□□ 1.5
USB1-214ENST00000568848 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
USB1-214ENST00000568848 PTPRTO14522 1441 aa24.37■■□□□ 1.49
USB1-214ENST00000568848 NCOA1Q15788 1441 aa24.37■■□□□ 1.49
USB1-214ENST00000568848 GPATCH8Q9UKJ3 1502 aaKnown RBP24.37■■□□□ 1.49
USB1-214ENST00000568848 CAMSAP1Q5T5Y3 1602 aa24.35■■□□□ 1.49
USB1-214ENST00000568848 FYCO1Q9BQS8 1478 aa24.35■■□□□ 1.49
USB1-214ENST00000568848 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
USB1-214ENST00000568848 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
USB1-214ENST00000568848 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
USB1-214ENST00000568848 ATP7AQ04656 1500 aa24.3■■□□□ 1.48
USB1-214ENST00000568848 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
USB1-214ENST00000568848 CNTLNQ9NXG0 1405 aa24.29■■□□□ 1.48
USB1-214ENST00000568848 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
USB1-214ENST00000568848 SPATA31D1Q6ZQQ2 1576 aa24.29■■□□□ 1.48
USB1-214ENST00000568848 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
USB1-214ENST00000568848 MROH2AA6NES4 1674 aa24.28■■□□□ 1.48
USB1-214ENST00000568848 ZNF644Q9H582 1327 aaPredicted RBP24.28■■□□□ 1.48
USB1-214ENST00000568848 MYO3AQ8NEV4 1616 aa24.27■■□□□ 1.48
USB1-214ENST00000568848 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
USB1-214ENST00000568848 GGT6Q6P531 493 aa24.25■■□□□ 1.47
USB1-214ENST00000568848 CFDP1Q9UEE9 299 aaPredicted RBP24.25■■□□□ 1.47
USB1-214ENST00000568848 A2MP01023 1474 aa24.25■■□□□ 1.47
USB1-214ENST00000568848 NPATQ14207 1427 aa24.22■■□□□ 1.47
USB1-214ENST00000568848 CCNB3Q8WWL7 1395 aa24.22■■□□□ 1.47
USB1-214ENST00000568848 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
USB1-214ENST00000568848 CEP170BQ9Y4F5 1589 aaPredicted RBP24.2■■□□□ 1.46
USB1-214ENST00000568848 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
USB1-214ENST00000568848 ZNF142P52746 1687 aaPredicted RBP24.18■■□□□ 1.46
USB1-214ENST00000568848 SOCS7O14512 581 aa24.17■■□□□ 1.46
USB1-214ENST00000568848 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
USB1-214ENST00000568848 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
USB1-214ENST00000568848 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
USB1-214ENST00000568848 PLEKHH2Q8IVE3 1493 aa24.13■■□□□ 1.45
USB1-214ENST00000568848 ADGBQ8N7X0 1667 aa24.12■■□□□ 1.45
USB1-214ENST00000568848 TCOF1Q13428 1488 aaKnown RBP24.12■■□□□ 1.45
USB1-214ENST00000568848 MBD5Q9P267 1494 aa24.12■■□□□ 1.45
USB1-214ENST00000568848 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
USB1-214ENST00000568848 IQSEC2Q5JU85 1478 aa24.11■■□□□ 1.45
USB1-214ENST00000568848 PLA2R1Q13018 1463 aa24.08■■□□□ 1.45
USB1-214ENST00000568848 DNMT1P26358 1616 aaKnown RBP24.07■■□□□ 1.44
USB1-214ENST00000568848 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
USB1-214ENST00000568848 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
USB1-214ENST00000568848 PKD2Q13563 968 aa24.04■■□□□ 1.44
USB1-214ENST00000568848 A2ML1A8K2U0 1454 aa24.04■■□□□ 1.44
USB1-214ENST00000568848 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
USB1-214ENST00000568848 KIF3BO15066 747 aa24.02■■□□□ 1.44
USB1-214ENST00000568848 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms