RNA–Protein interactions for RNA: ENST00000567946.1

PKD1-234, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,822 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-234ENST00000567946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.98■■□□□ 1.43
PKD1-234ENST00000567946 TTC37Q6PGP7 1564 aa23.97■■□□□ 1.43
PKD1-234ENST00000567946 DNMT1P26358 1616 aaKnown RBP23.97■■□□□ 1.43
PKD1-234ENST00000567946 CHIC2Q9UKJ5 165 aa23.96■■□□□ 1.43
PKD1-234ENST00000567946 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
PKD1-234ENST00000567946 DAPK1P53355 1430 aa23.96■■□□□ 1.43
PKD1-234ENST00000567946 AKNAQ7Z591 1439 aa23.96■■□□□ 1.43
PKD1-234ENST00000567946 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
PKD1-234ENST00000567946 CAMSAP2Q08AD1 1489 aa23.94■■□□□ 1.42
PKD1-234ENST00000567946 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
PKD1-234ENST00000567946 CDC42BPBQ9Y5S2 1711 aa23.94■■□□□ 1.42
PKD1-234ENST00000567946 WDR7Q9Y4E6 1490 aa23.94■■□□□ 1.42
PKD1-234ENST00000567946 CFDP1Q9UEE9 299 aaPredicted RBP23.94■■□□□ 1.42
PKD1-234ENST00000567946 ABCC5O15440 1437 aa23.93■■□□□ 1.42
PKD1-234ENST00000567946 RRP7BPQ9NSQ0 103 aa23.93■■□□□ 1.42
PKD1-234ENST00000567946 ASXL2Q76L83 1435 aa23.92■■□□□ 1.42
PKD1-234ENST00000567946 NPM1P06748 294 aaKnown RBP eCLIP23.91■■□□□ 1.42
PKD1-234ENST00000567946 PREX2Q70Z35 1606 aa23.9■■□□□ 1.42
PKD1-234ENST00000567946 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
PKD1-234ENST00000567946 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
PKD1-234ENST00000567946 KDM6BO15054 1643 aa23.86■■□□□ 1.41
PKD1-234ENST00000567946 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
PKD1-234ENST00000567946 ZNF777Q9ULD5 760 aaPredicted RBP23.85■■□□□ 1.41
PKD1-234ENST00000567946 ABCA9Q8IUA7 1624 aa23.82■■□□□ 1.4
PKD1-234ENST00000567946 SIN3AQ96ST3 1273 aa23.81■■□□□ 1.4
PKD1-234ENST00000567946 CROCC2H7BZ55 1655 aa23.81■■□□□ 1.4
PKD1-234ENST00000567946 SAMD9LQ8IVG5 1584 aa23.8■■□□□ 1.4
PKD1-234ENST00000567946 PLCH2O75038 1416 aa23.79■■□□□ 1.4
PKD1-234ENST00000567946 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
PKD1-234ENST00000567946 ARHGAP5Q13017 1502 aa23.77■■□□□ 1.4
PKD1-234ENST00000567946 NEUROD1Q13562 356 aa23.76■■□□□ 1.39
PKD1-234ENST00000567946 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
PKD1-234ENST00000567946 ADGRL2O95490 1459 aa23.74■■□□□ 1.39
PKD1-234ENST00000567946 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
PKD1-234ENST00000567946 ARAP3Q8WWN8 1544 aa23.72■■□□□ 1.39
PKD1-234ENST00000567946 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
PKD1-234ENST00000567946 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
PKD1-234ENST00000567946 SHANK2Q9UPX8 1470 aa23.7■■□□□ 1.39
PKD1-234ENST00000567946 HNRNPMP52272 730 aaKnown RBP eCLIP23.7■■□□□ 1.38
PKD1-234ENST00000567946 DENND4BO75064 1496 aaPredicted RBP23.7■■□□□ 1.38
PKD1-234ENST00000567946 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
PKD1-234ENST00000567946 SYCP2Q9BX26 1530 aa23.68■■□□□ 1.38
PKD1-234ENST00000567946 ARHGEF12Q9NZN5 1544 aa23.67■■□□□ 1.38
PKD1-234ENST00000567946 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
PKD1-234ENST00000567946 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
PKD1-234ENST00000567946 EFCAB2Q5VUJ9 269 aa23.66■■□□□ 1.38
PKD1-234ENST00000567946 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
PKD1-234ENST00000567946 ANKRD30AQ9BXX3 1397 aa23.66■■□□□ 1.38
PKD1-234ENST00000567946 FAM69CQ0P6D2 419 aa23.66■■□□□ 1.38
PKD1-234ENST00000567946 KIAA1107Q9UPP5 1409 aa23.64■■□□□ 1.38
PKD1-234ENST00000567946 ABCC1P33527 1531 aa23.64■■□□□ 1.37
PKD1-234ENST00000567946 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.37
PKD1-234ENST00000567946 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.37
PKD1-234ENST00000567946 DIP2BQ9P265 1576 aa23.63■■□□□ 1.37
PKD1-234ENST00000567946 MPHOSPH9Q99550 1183 aa23.63■■□□□ 1.37
PKD1-234ENST00000567946 FANCAO15360 1455 aa23.62■■□□□ 1.37
PKD1-234ENST00000567946 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
PKD1-234ENST00000567946 CD109Q6YHK3 1445 aa23.62■■□□□ 1.37
PKD1-234ENST00000567946 PLEKHH2Q8IVE3 1493 aa23.61■■□□□ 1.37
PKD1-234ENST00000567946 GLI2P10070 1586 aa23.6■■□□□ 1.37
PKD1-234ENST00000567946 MAP3K4Q9Y6R4 1608 aa23.6■■□□□ 1.37
PKD1-234ENST00000567946 TONSLQ96HA7 1378 aa23.59■■□□□ 1.37
PKD1-234ENST00000567946 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
PKD1-234ENST00000567946 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
PKD1-234ENST00000567946 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
PKD1-234ENST00000567946 TSPOAP1O95153 1857 aa23.57■■□□□ 1.36
PKD1-234ENST00000567946 ANKRD50Q9ULJ7 1429 aa23.57■■□□□ 1.36
PKD1-234ENST00000567946 TRAPPC8Q9Y2L5 1435 aa23.56■■□□□ 1.36
PKD1-234ENST00000567946 PZPP20742 1482 aa23.55■■□□□ 1.36
PKD1-234ENST00000567946 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
PKD1-234ENST00000567946 MAST1Q9Y2H9 1570 aa23.54■■□□□ 1.36
PKD1-234ENST00000567946 FOXD1Q16676 465 aa23.52■■□□□ 1.36
PKD1-234ENST00000567946 KIF15Q9NS87 1388 aa23.52■■□□□ 1.36
PKD1-234ENST00000567946 ADGRL1O94910 1474 aa23.52■■□□□ 1.36
PKD1-234ENST00000567946 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
PKD1-234ENST00000567946 CFAP74Q9C0B2 1584 aa23.49■■□□□ 1.35
PKD1-234ENST00000567946 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
PKD1-234ENST00000567946 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
PKD1-234ENST00000567946 ANKRD30BQ9BXX2 1392 aa23.48■■□□□ 1.35
PKD1-234ENST00000567946 PPRC1Q5VV67 1664 aaKnown RBP23.47■■□□□ 1.35
PKD1-234ENST00000567946 NEO1Q92859 1461 aa23.44■■□□□ 1.34
PKD1-234ENST00000567946 PLXNC1O60486 1568 aa23.44■■□□□ 1.34
PKD1-234ENST00000567946 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
PKD1-234ENST00000567946 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
PKD1-234ENST00000567946 RPRD2Q5VT52 1461 aaKnown RBP23.4■■□□□ 1.34
PKD1-234ENST00000567946 NUP155O75694 1391 aa23.4■■□□□ 1.34
PKD1-234ENST00000567946 INO80Q9ULG1 1556 aaPredicted RBP23.4■■□□□ 1.34
PKD1-234ENST00000567946 RTEL1-TNFRSF6BF6WH68 1400 aa23.39■■□□□ 1.34
PKD1-234ENST00000567946 SPAG9O60271 1321 aaKnown RBP23.39■■□□□ 1.33
PKD1-234ENST00000567946 ZNF518AQ6AHZ1 1483 aa23.37■■□□□ 1.33
PKD1-234ENST00000567946 POGZQ7Z3K3 1410 aa23.37■■□□□ 1.33
PKD1-234ENST00000567946 KIDINS220Q9ULH0 1771 aa23.37■■□□□ 1.33
PKD1-234ENST00000567946 KDM5CP41229 1560 aa23.36■■□□□ 1.33
PKD1-234ENST00000567946 PKD2Q13563 968 aa23.36■■□□□ 1.33
PKD1-234ENST00000567946 ATP7AQ04656 1500 aa23.36■■□□□ 1.33
PKD1-234ENST00000567946 RICTORQ6R327 1708 aa23.35■■□□□ 1.33
PKD1-234ENST00000567946 MIER1Q8N108 512 aa23.33■■□□□ 1.32
PKD1-234ENST00000567946 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.32
PKD1-234ENST00000567946 DUOX2Q9NRD8 1548 aa23.32■■□□□ 1.32
PKD1-234ENST00000567946 TEX14Q8IWB6 1497 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms