RNA–Protein interactions for RNA: ENST00000567645.2

TRAF7-204, Transcript of TNF receptor associated factor 7, humanhuman

TSL 5

Gene TRAF7, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-204ENST00000567645 CCDC18Q5T9S5 1454 aa23.48■■□□□ 1.35
TRAF7-204ENST00000567645 MAGI2Q86UL8 1455 aa23.48■■□□□ 1.35
TRAF7-204ENST00000567645 FYCO1Q9BQS8 1478 aa23.48■■□□□ 1.35
TRAF7-204ENST00000567645 FBXO41Q8TF61 875 aa23.47■■□□□ 1.35
TRAF7-204ENST00000567645 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
TRAF7-204ENST00000567645 TROQ12816 1431 aaPredicted RBP23.46■■□□□ 1.35
TRAF7-204ENST00000567645 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
TRAF7-204ENST00000567645 SIGLEC1Q9BZZ2 1709 aa23.46■■□□□ 1.35
TRAF7-204ENST00000567645 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.34
TRAF7-204ENST00000567645 KIF14Q15058 1648 aa23.44■■□□□ 1.34
TRAF7-204ENST00000567645 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
TRAF7-204ENST00000567645 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
TRAF7-204ENST00000567645 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
TRAF7-204ENST00000567645 LOC105371045A0A1W2PR82 267 aa23.41■■□□□ 1.34
TRAF7-204ENST00000567645 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
TRAF7-204ENST00000567645 HSPA2P54652 639 aa23.37■■□□□ 1.33
TRAF7-204ENST00000567645 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
TRAF7-204ENST00000567645 ATP10AO60312 1499 aa23.36■■□□□ 1.33
TRAF7-204ENST00000567645 MLECQ14165 292 aa23.34■■□□□ 1.33
TRAF7-204ENST00000567645 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
TRAF7-204ENST00000567645 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
TRAF7-204ENST00000567645 ARHGEF12Q9NZN5 1544 aa23.3■■□□□ 1.32
TRAF7-204ENST00000567645 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
TRAF7-204ENST00000567645 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
TRAF7-204ENST00000567645 ZNF518AQ6AHZ1 1483 aa23.25■■□□□ 1.31
TRAF7-204ENST00000567645 KDM5CP41229 1560 aa23.25■■□□□ 1.31
TRAF7-204ENST00000567645 MTUS2Q5JR59 1369 aa23.25■■□□□ 1.31
TRAF7-204ENST00000567645 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
TRAF7-204ENST00000567645 FER1L4A9Z1Z3 1794 aa23.24■■□□□ 1.31
TRAF7-204ENST00000567645 PREX2Q70Z35 1606 aa23.22■■□□□ 1.31
TRAF7-204ENST00000567645 CDC42BPBQ9Y5S2 1711 aa23.2■■□□□ 1.3
TRAF7-204ENST00000567645 MLH3Q9UHC1 1453 aa23.19■■□□□ 1.3
TRAF7-204ENST00000567645 VPS8Q8N3P4 1428 aa23.17■■□□□ 1.3
TRAF7-204ENST00000567645 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
TRAF7-204ENST00000567645 CDC42BPAQ5VT25 1732 aa23.16■■□□□ 1.3
TRAF7-204ENST00000567645 REREQ9P2R6 1566 aa23.16■■□□□ 1.3
TRAF7-204ENST00000567645 DIP2CQ9Y2E4 1556 aa23.16■■□□□ 1.3
TRAF7-204ENST00000567645 CERKQ8TCT0 537 aa23.16■■□□□ 1.3
TRAF7-204ENST00000567645 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
TRAF7-204ENST00000567645 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.3
TRAF7-204ENST00000567645 MYT1LQ9UL68 1186 aa23.14■■□□□ 1.29
TRAF7-204ENST00000567645 ZNF777Q9ULD5 760 aaPredicted RBP23.14■■□□□ 1.29
TRAF7-204ENST00000567645 ABCC1P33527 1531 aa23.13■■□□□ 1.29
TRAF7-204ENST00000567645 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
TRAF7-204ENST00000567645 AGLP35573 1532 aa23.11■■□□□ 1.29
TRAF7-204ENST00000567645 PREX1Q8TCU6 1659 aa23.1■■□□□ 1.29
TRAF7-204ENST00000567645 CFDP1Q9UEE9 299 aaPredicted RBP23.1■■□□□ 1.29
TRAF7-204ENST00000567645 ABCA6Q8N139 1617 aa23.1■■□□□ 1.29
TRAF7-204ENST00000567645 SETD1BQ9UPS6 1966 aaKnown RBP23.1■■□□□ 1.29
TRAF7-204ENST00000567645 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
TRAF7-204ENST00000567645 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.29
TRAF7-204ENST00000567645 STRCQ7RTU9 1775 aa23.06■■□□□ 1.28
TRAF7-204ENST00000567645 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
TRAF7-204ENST00000567645 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
TRAF7-204ENST00000567645 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
TRAF7-204ENST00000567645 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
TRAF7-204ENST00000567645 UHRF1BP1Q6BDS2 1440 aa23.04■■□□□ 1.28
TRAF7-204ENST00000567645 SUPT6HQ7KZ85 1726 aaKnown RBP23.02■■□□□ 1.28
TRAF7-204ENST00000567645 PLEKHH2Q8IVE3 1493 aa23.02■■□□□ 1.28
TRAF7-204ENST00000567645 NCOA2Q15596 1464 aa23.01■■□□□ 1.27
TRAF7-204ENST00000567645 HNRNPMP52272 730 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRAF7-204ENST00000567645 C3P01024 1663 aa23■■□□□ 1.27
TRAF7-204ENST00000567645 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
TRAF7-204ENST00000567645 KIAA1107Q9UPP5 1409 aa22.99■■□□□ 1.27
TRAF7-204ENST00000567645 APLP2Q06481 763 aa22.96■■□□□ 1.27
TRAF7-204ENST00000567645 SPAG9O60271 1321 aaKnown RBP22.96■■□□□ 1.27
TRAF7-204ENST00000567645 PTPRTO14522 1441 aa22.96■■□□□ 1.27
TRAF7-204ENST00000567645 CNTLNQ9NXG0 1405 aa22.96■■□□□ 1.27
TRAF7-204ENST00000567645 MAP3K1Q13233 1512 aa22.96■■□□□ 1.27
TRAF7-204ENST00000567645 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
TRAF7-204ENST00000567645 ZNF644Q9H582 1327 aaPredicted RBP22.95■■□□□ 1.26
TRAF7-204ENST00000567645 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
TRAF7-204ENST00000567645 ZMYM3Q14202 1370 aa22.91■■□□□ 1.26
TRAF7-204ENST00000567645 NPATQ14207 1427 aa22.9■■□□□ 1.26
TRAF7-204ENST00000567645 ATP7AQ04656 1500 aa22.89■■□□□ 1.26
TRAF7-204ENST00000567645 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
TRAF7-204ENST00000567645 NCOA1Q15788 1441 aa22.88■■□□□ 1.25
TRAF7-204ENST00000567645 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
TRAF7-204ENST00000567645 MBD5Q9P267 1494 aa22.86■■□□□ 1.25
TRAF7-204ENST00000567645 PLXNC1O60486 1568 aa22.85■■□□□ 1.25
TRAF7-204ENST00000567645 INO80Q9ULG1 1556 aaPredicted RBP22.85■■□□□ 1.25
TRAF7-204ENST00000567645 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
TRAF7-204ENST00000567645 A2MP01023 1474 aa22.84■■□□□ 1.25
TRAF7-204ENST00000567645 CCDC141Q6ZP82 1450 aa22.82■■□□□ 1.24
TRAF7-204ENST00000567645 MYOM3Q5VTT5 1437 aa22.81■■□□□ 1.24
TRAF7-204ENST00000567645 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
TRAF7-204ENST00000567645 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
TRAF7-204ENST00000567645 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
TRAF7-204ENST00000567645 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
TRAF7-204ENST00000567645 GGT6Q6P531 493 aa22.78■■□□□ 1.24
TRAF7-204ENST00000567645 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
TRAF7-204ENST00000567645 NCKAP5LQ9HCH0 1330 aa22.77■■□□□ 1.24
TRAF7-204ENST00000567645 MIA2Q96PC5 1412 aa22.76■■□□□ 1.23
TRAF7-204ENST00000567645 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
TRAF7-204ENST00000567645 CLTCQ00610 1675 aaKnown RBP22.75■■□□□ 1.23
TRAF7-204ENST00000567645 IQSEC2Q5JU85 1478 aa22.75■■□□□ 1.23
TRAF7-204ENST00000567645 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
TRAF7-204ENST00000567645 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
TRAF7-204ENST00000567645 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
TRAF7-204ENST00000567645 ILDR2Q71H61 639 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms