RNA–Protein interactions for RNA: ENST00000567118.5

PKM-219, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 2,254 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-219ENST00000567118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■■□□□ 11.8
PKM-219ENST00000567118 MIA2Q96PC5 1412 aa16.74■□□□□ 0.27
PKM-219ENST00000567118 WDR7Q9Y4E6 1490 aa16.74■□□□□ 0.27
PKM-219ENST00000567118 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
PKM-219ENST00000567118 CAMSAP2Q08AD1 1489 aa16.73■□□□□ 0.27
PKM-219ENST00000567118 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
PKM-219ENST00000567118 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.26
PKM-219ENST00000567118 ABCC5O15440 1437 aa16.69■□□□□ 0.26
PKM-219ENST00000567118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.69■□□□□ 0.265e-8■□□□□ 8.5
PKM-219ENST00000567118 TCOF1Q13428 1488 aaKnown RBP16.69■□□□□ 0.26
PKM-219ENST00000567118 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
PKM-219ENST00000567118 DAPK1P53355 1430 aa16.68■□□□□ 0.26
PKM-219ENST00000567118 EFCAB2Q5VUJ9 269 aa16.67■□□□□ 0.26
PKM-219ENST00000567118 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
PKM-219ENST00000567118 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
PKM-219ENST00000567118 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
PKM-219ENST00000567118 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
PKM-219ENST00000567118 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
PKM-219ENST00000567118 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
PKM-219ENST00000567118 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
PKM-219ENST00000567118 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
PKM-219ENST00000567118 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
PKM-219ENST00000567118 PLCH2O75038 1416 aa16.64■□□□□ 0.25
PKM-219ENST00000567118 NAIPQ13075 1403 aa16.62■□□□□ 0.25
PKM-219ENST00000567118 SAMD9LQ8IVG5 1584 aa16.62■□□□□ 0.25
PKM-219ENST00000567118 SYCP2Q9BX26 1530 aa16.62■□□□□ 0.25
PKM-219ENST00000567118 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
PKM-219ENST00000567118 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
PKM-219ENST00000567118 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
PKM-219ENST00000567118 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
PKM-219ENST00000567118 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
PKM-219ENST00000567118 HFM1A2PYH4 1435 aa16.59■□□□□ 0.25
PKM-219ENST00000567118 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.25
PKM-219ENST00000567118 FANCAO15360 1455 aa16.58■□□□□ 0.25
PKM-219ENST00000567118 MBD5Q9P267 1494 aa16.58■□□□□ 0.25
PKM-219ENST00000567118 DNMT1P26358 1616 aaKnown RBP16.58■□□□□ 0.24
PKM-219ENST00000567118 FOXD1Q16676 465 aa16.58■□□□□ 0.24
PKM-219ENST00000567118 KDM6BO15054 1643 aa16.57■□□□□ 0.24
PKM-219ENST00000567118 C9orf84Q5VXU9 1444 aa16.57■□□□□ 0.24
PKM-219ENST00000567118 TRAPPC8Q9Y2L5 1435 aa16.57■□□□□ 0.24
PKM-219ENST00000567118 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
PKM-219ENST00000567118 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
PKM-219ENST00000567118 RAPGEF3O95398 923 aa16.56■□□□□ 0.24
PKM-219ENST00000567118 NCOA1Q15788 1441 aa16.55■□□□□ 0.24
PKM-219ENST00000567118 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
PKM-219ENST00000567118 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
PKM-219ENST00000567118 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
PKM-219ENST00000567118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.243e-16■□□□□ 9.7
PKM-219ENST00000567118 ANKRD30AQ9BXX3 1397 aa16.53■□□□□ 0.24
PKM-219ENST00000567118 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.24
PKM-219ENST00000567118 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.23
PKM-219ENST00000567118 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
PKM-219ENST00000567118 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
PKM-219ENST00000567118 KIF15Q9NS87 1388 aa16.51■□□□□ 0.23
PKM-219ENST00000567118 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
PKM-219ENST00000567118 SPAG9O60271 1321 aaKnown RBP16.51■□□□□ 0.23
PKM-219ENST00000567118 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
PKM-219ENST00000567118 ROCK1Q13464 1354 aa16.49■□□□□ 0.23
PKM-219ENST00000567118 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
PKM-219ENST00000567118 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
PKM-219ENST00000567118 ANKRD50Q9ULJ7 1429 aa16.47■□□□□ 0.23
PKM-219ENST00000567118 KIAA1107Q9UPP5 1409 aa16.47■□□□□ 0.23
PKM-219ENST00000567118 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
PKM-219ENST00000567118 SLC4A1APQ9BWU0 796 aaKnown RBP16.47■□□□□ 0.23
PKM-219ENST00000567118 ABCC1P33527 1531 aa16.47■□□□□ 0.23
PKM-219ENST00000567118 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
PKM-219ENST00000567118 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
PKM-219ENST00000567118 CROCC2H7BZ55 1655 aa16.44■□□□□ 0.22
PKM-219ENST00000567118 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
PKM-219ENST00000567118 NUP155O75694 1391 aa16.42■□□□□ 0.22
PKM-219ENST00000567118 DIP2BQ9P265 1576 aa16.42■□□□□ 0.22
PKM-219ENST00000567118 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
PKM-219ENST00000567118 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
PKM-219ENST00000567118 SHANK2Q9UPX8 1470 aa16.4■□□□□ 0.22
PKM-219ENST00000567118 ADGBQ8N7X0 1667 aa16.39■□□□□ 0.21
PKM-219ENST00000567118 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
PKM-219ENST00000567118 PKD2Q13563 968 aa16.38■□□□□ 0.21
PKM-219ENST00000567118 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
PKM-219ENST00000567118 KIF3BO15066 747 aa16.38■□□□□ 0.21
PKM-219ENST00000567118 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
PKM-219ENST00000567118 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
PKM-219ENST00000567118 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
PKM-219ENST00000567118 POGZQ7Z3K3 1410 aa16.34■□□□□ 0.21
PKM-219ENST00000567118 ZNF518AQ6AHZ1 1483 aa16.34■□□□□ 0.21
PKM-219ENST00000567118 GGT6Q6P531 493 aa16.34■□□□□ 0.21
PKM-219ENST00000567118 ZFYVE16Q7Z3T8 1539 aa16.33■□□□□ 0.2
PKM-219ENST00000567118 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
PKM-219ENST00000567118 GLI2P10070 1586 aa16.32■□□□□ 0.2
PKM-219ENST00000567118 NEO1Q92859 1461 aa16.32■□□□□ 0.2
PKM-219ENST00000567118 KIF13AQ9H1H9 1805 aa16.31■□□□□ 0.2
PKM-219ENST00000567118 PZPP20742 1482 aa16.31■□□□□ 0.2
PKM-219ENST00000567118 YEATS2Q9ULM3 1422 aa16.3■□□□□ 0.2
PKM-219ENST00000567118 COL17A1Q9UMD9 1497 aaPredicted RBP16.3■□□□□ 0.2
PKM-219ENST00000567118 MIER1Q8N108 512 aa16.29■□□□□ 0.2
PKM-219ENST00000567118 MAST1Q9Y2H9 1570 aa16.29■□□□□ 0.2
PKM-219ENST00000567118 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
PKM-219ENST00000567118 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
PKM-219ENST00000567118 PPRC1Q5VV67 1664 aaKnown RBP16.27■□□□□ 0.2
PKM-219ENST00000567118 MLECQ14165 292 aa16.27■□□□□ 0.2
PKM-219ENST00000567118 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms