RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZSWIM6Q9HCJ5 1215 aa8.32□□□□□ -1.08
SMG1-212ENST00000566328 ERBB3P21860 1342 aa8.31□□□□□ -1.08
SMG1-212ENST00000566328 STK24Q9Y6E0 443 aa8.31□□□□□ -1.08
SMG1-212ENST00000566328 ECM2O94769 699 aaPredicted RBP8.3□□□□□ -1.08
SMG1-212ENST00000566328 STK25O00506 426 aa8.29□□□□□ -1.08
SMG1-212ENST00000566328 TMEM92Q6UXU6 159 aa8.27□□□□□ -1.09
SMG1-212ENST00000566328 FBXO22Q8NEZ5 403 aa8.26□□□□□ -1.09
SMG1-212ENST00000566328 RNF166Q96A37 237 aaPredicted RBP8.26□□□□□ -1.09
SMG1-212ENST00000566328 VARS2Q5ST30 1063 aaKnown RBP8.24□□□□□ -1.09
SMG1-212ENST00000566328 MFRPQ9BY79 579 aa8.23□□□□□ -1.09
SMG1-212ENST00000566328 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
SMG1-212ENST00000566328 PKD2Q13563 968 aa8.21□□□□□ -1.1
SMG1-212ENST00000566328 MYT1LQ9UL68 1186 aa8.21□□□□□ -1.1
SMG1-212ENST00000566328 RGL2O15211 777 aa8.19□□□□□ -1.1
SMG1-212ENST00000566328 ZNF687Q8N1G0 1237 aa8.19□□□□□ -1.1
SMG1-212ENST00000566328 ARSIQ5FYB1 569 aa8.18□□□□□ -1.1
SMG1-212ENST00000566328 TMC2Q8TDI7 906 aa8.16□□□□□ -1.1
SMG1-212ENST00000566328 C2orf72A6NCS6 295 aa8.15□□□□□ -1.1
SMG1-212ENST00000566328 KIF3CO14782 793 aa8.15□□□□□ -1.1
SMG1-212ENST00000566328 PTGER2P43116 358 aa8.14□□□□□ -1.11
SMG1-212ENST00000566328 ZNF316A6NFI3 1004 aaPredicted RBP8.13□□□□□ -1.11
SMG1-212ENST00000566328 SLC34A2O95436 690 aa8.11□□□□□ -1.11
SMG1-212ENST00000566328 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG1-212ENST00000566328 NUDT7P0C024 238 aa8.08□□□□□ -1.12
SMG1-212ENST00000566328 ANKRD13DQ6ZTN6 518 aa8.08□□□□□ -1.12
SMG1-212ENST00000566328 PBX2P40425 430 aa8.07□□□□□ -1.12
SMG1-212ENST00000566328 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
SMG1-212ENST00000566328 PCDHGA4Q9Y5G9 962 aa8.07□□□□□ -1.12
SMG1-212ENST00000566328 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
SMG1-212ENST00000566328 PPP1R37O75864 691 aa8.06□□□□□ -1.12
SMG1-212ENST00000566328 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG1-212ENST00000566328 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
SMG1-212ENST00000566328 LHX6Q9UPM6 363 aa8.03□□□□□ -1.12
SMG1-212ENST00000566328 CHGAP10645 457 aaKnown RBP8.02□□□□□ -1.13
SMG1-212ENST00000566328 TBC1D12O60347 775 aa8.01□□□□□ -1.13
SMG1-212ENST00000566328 FOXK1P85037 733 aa8.01□□□□□ -1.13
SMG1-212ENST00000566328 PTCD2Q8WV60 388 aaKnown RBP8.01□□□□□ -1.13
SMG1-212ENST00000566328 GPHNQ9NQX3 736 aaPredicted RBP8.01□□□□□ -1.13
SMG1-212ENST00000566328 PLPP6Q8IY26 295 aa7.99□□□□□ -1.13
SMG1-212ENST00000566328 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
SMG1-212ENST00000566328 DNAJC5Q9H3Z4 198 aa7.97□□□□□ -1.13
SMG1-212ENST00000566328 POTEEQ6S8J3 1075 aa7.96□□□□□ -1.14
SMG1-212ENST00000566328 AXIN2Q9Y2T1 843 aa7.96□□□□□ -1.14
SMG1-212ENST00000566328 DSG2Q14126 1118 aa7.95□□□□□ -1.14
SMG1-212ENST00000566328 PLA2G2EQ9NZK7 142 aa7.95□□□□□ -1.14
SMG1-212ENST00000566328 KDM4FA0A1W2PPD8 638 aa7.94□□□□□ -1.14
SMG1-212ENST00000566328 PPP4R3BQ5MIZ7 849 aa7.94□□□□□ -1.14
SMG1-212ENST00000566328 KCNH8Q96L42 1107 aa7.93□□□□□ -1.14
SMG1-212ENST00000566328 ADGRD1Q6QNK2 874 aa7.92□□□□□ -1.14
SMG1-212ENST00000566328 HCSTQ9UBK5 93 aa7.92□□□□□ -1.14
SMG1-212ENST00000566328 TK2O00142 265 aa7.91□□□□□ -1.14
SMG1-212ENST00000566328 STAC3Q96MF2 364 aa7.9□□□□□ -1.14
SMG1-212ENST00000566328 NKX1-1Q15270 411 aaPredicted RBP7.89□□□□□ -1.15
SMG1-212ENST00000566328 PDE4AP27815 886 aa7.88□□□□□ -1.15
SMG1-212ENST00000566328 OXER1Q8TDS5 423 aa7.87□□□□□ -1.15
SMG1-212ENST00000566328 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
SMG1-212ENST00000566328 PSEN2P49810 448 aa7.86□□□□□ -1.15
SMG1-212ENST00000566328 PPP1R15BQ5SWA1 713 aa7.86□□□□□ -1.15
SMG1-212ENST00000566328 DMRTA1Q5VZB9 504 aa7.85□□□□□ -1.15
SMG1-212ENST00000566328 UPF1Q92900 1129 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMG1-212ENST00000566328 HRO43593 1189 aa7.84□□□□□ -1.15
SMG1-212ENST00000566328 KCNK17Q96T54 332 aa7.84□□□□□ -1.15
SMG1-212ENST00000566328 ZNF454Q8N9F8 522 aa7.82□□□□□ -1.16
SMG1-212ENST00000566328 GTPBP6O43824 516 aaPredicted RBP7.81□□□□□ -1.16
SMG1-212ENST00000566328 NCKAP5LQ9HCH0 1330 aa7.8□□□□□ -1.16
SMG1-212ENST00000566328 DCAF8L2P0C7V8 631 aa7.8□□□□□ -1.16
SMG1-212ENST00000566328 LARP6Q9BRS8 491 aaKnown RBP7.8□□□□□ -1.16
SMG1-212ENST00000566328 BCL2L12Q9HB09 334 aa7.8□□□□□ -1.16
SMG1-212ENST00000566328 PTPREP23469 700 aa7.79□□□□□ -1.16
SMG1-212ENST00000566328 DDX27Q96GQ7 796 aaKnown RBP7.79□□□□□ -1.16
SMG1-212ENST00000566328 SLC4A5Q9BY07 1137 aa7.79□□□□□ -1.16
SMG1-212ENST00000566328 ANO8Q9HCE9 1232 aaPredicted RBP7.79□□□□□ -1.16
SMG1-212ENST00000566328 VPS9D1Q9Y2B5 631 aa7.79□□□□□ -1.16
SMG1-212ENST00000566328 FOSBP53539 338 aa7.78□□□□□ -1.16
SMG1-212ENST00000566328 KCTD12Q96CX2 325 aaKnown RBP7.78□□□□□ -1.16
SMG1-212ENST00000566328 EVI5O60447 810 aa7.77□□□□□ -1.17
SMG1-212ENST00000566328 MAP3K9P80192 1104 aa7.77□□□□□ -1.17
SMG1-212ENST00000566328 JPH4Q96JJ6 628 aa7.77□□□□□ -1.17
SMG1-212ENST00000566328 ZDHHC16Q969W1 377 aa7.75□□□□□ -1.17
SMG1-212ENST00000566328 GOLGA8CPA6NN73 597 aa7.74□□□□□ -1.17
SMG1-212ENST00000566328 MFSD10Q14728 455 aa7.74□□□□□ -1.17
SMG1-212ENST00000566328 MRPL50Q8N5N7 158 aaKnown RBP7.72□□□□□ -1.17
SMG1-212ENST00000566328 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
SMG1-212ENST00000566328 BHMG1C9JSJ3 638 aaPredicted RBP7.71□□□□□ -1.18
SMG1-212ENST00000566328 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.18
SMG1-212ENST00000566328 PTPN5P54829 565 aa7.7□□□□□ -1.18
SMG1-212ENST00000566328 ADAM33Q9BZ11 813 aa7.7□□□□□ -1.18
SMG1-212ENST00000566328 RGS20O76081 388 aa7.69□□□□□ -1.18
SMG1-212ENST00000566328 WNT2BQ93097 391 aa7.69□□□□□ -1.18
SMG1-212ENST00000566328 FBXW7Q969H0 707 aa7.69□□□□□ -1.18
SMG1-212ENST00000566328 PPP1R3GB7ZBB8 358 aa7.68□□□□□ -1.18
SMG1-212ENST00000566328 IFFO2Q5TF58 517 aa7.68□□□□□ -1.18
SMG1-212ENST00000566328 THSD4Q6ZMP0 1018 aa7.68□□□□□ -1.18
SMG1-212ENST00000566328 TYW1BQ6NUM6 668 aa7.67□□□□□ -1.18
SMG1-212ENST00000566328 EMILIN3Q9NT22 766 aa7.67□□□□□ -1.18
SMG1-212ENST00000566328 PCDHGA10Q9Y5H3 936 aa7.66□□□□□ -1.18
SMG1-212ENST00000566328 PHF14O94880 888 aa7.65□□□□□ -1.18
SMG1-212ENST00000566328 RABGEF1Q9UJ41 708 aa7.65□□□□□ -1.18
SMG1-212ENST00000566328 IRX2Q9BZI1 471 aaPredicted RBP7.64□□□□□ -1.19
SMG1-212ENST00000566328 A0A0G2JS52 829 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms