RNA–Protein interactions for RNA: ENST00000565993.1

AC055855.2-201, humanhuman

TSL 2 BASIC

Gene AC055855.2, Length 500 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.2-201ENST00000565993 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
AC055855.2-201ENST00000565993 NLRP6P59044 892 aa12.61□□□□□ -0.39
AC055855.2-201ENST00000565993 VARS2Q5ST30 1063 aaKnown RBP12.6□□□□□ -0.39
AC055855.2-201ENST00000565993 GPR153Q6NV75 609 aa12.58□□□□□ -0.4
AC055855.2-201ENST00000565993 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
AC055855.2-201ENST00000565993 ZNF687Q8N1G0 1237 aa12.55□□□□□ -0.4
AC055855.2-201ENST00000565993 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
AC055855.2-201ENST00000565993 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
AC055855.2-201ENST00000565993 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
AC055855.2-201ENST00000565993 MFRPQ9BY79 579 aa12.48□□□□□ -0.41
AC055855.2-201ENST00000565993 PTGER2P43116 358 aa12.47□□□□□ -0.41
AC055855.2-201ENST00000565993 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
AC055855.2-201ENST00000565993 STK25O00506 426 aa12.46□□□□□ -0.41
AC055855.2-201ENST00000565993 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
AC055855.2-201ENST00000565993 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
AC055855.2-201ENST00000565993 KIF3CO14782 793 aa12.44□□□□□ -0.42
AC055855.2-201ENST00000565993 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
AC055855.2-201ENST00000565993 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
AC055855.2-201ENST00000565993 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC055855.2-201ENST00000565993 SLC34A2O95436 690 aa12.36□□□□□ -0.43
AC055855.2-201ENST00000565993 PBX2P40425 430 aa12.33□□□□□ -0.44
AC055855.2-201ENST00000565993 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
AC055855.2-201ENST00000565993 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
AC055855.2-201ENST00000565993 RGL2O15211 777 aa12.32□□□□□ -0.44
AC055855.2-201ENST00000565993 PKD2Q13563 968 aa12.32□□□□□ -0.44
AC055855.2-201ENST00000565993 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
AC055855.2-201ENST00000565993 NUDT7P0C024 238 aa12.31□□□□□ -0.44
AC055855.2-201ENST00000565993 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
AC055855.2-201ENST00000565993 LHX6Q9UPM6 363 aa12.26□□□□□ -0.45
AC055855.2-201ENST00000565993 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
AC055855.2-201ENST00000565993 PPP1R37O75864 691 aa12.2□□□□□ -0.46
AC055855.2-201ENST00000565993 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
AC055855.2-201ENST00000565993 PTCD2Q8WV60 388 aaKnown RBP12.17□□□□□ -0.46
AC055855.2-201ENST00000565993 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
AC055855.2-201ENST00000565993 ARHGAP33O14559 1287 aa12.15□□□□□ -0.46
AC055855.2-201ENST00000565993 FOXK1P85037 733 aa12.15□□□□□ -0.46
AC055855.2-201ENST00000565993 KDM4FA0A1W2PPD8 638 aa12.14□□□□□ -0.47
AC055855.2-201ENST00000565993 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
AC055855.2-201ENST00000565993 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
AC055855.2-201ENST00000565993 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
AC055855.2-201ENST00000565993 PLPP6Q8IY26 295 aa12.1□□□□□ -0.47
AC055855.2-201ENST00000565993 TK2O00142 265 aa12.09□□□□□ -0.47
AC055855.2-201ENST00000565993 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
AC055855.2-201ENST00000565993 TBC1D12O60347 775 aa12.08□□□□□ -0.48
AC055855.2-201ENST00000565993 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
AC055855.2-201ENST00000565993 DSG2Q14126 1118 aa12.04□□□□□ -0.48
AC055855.2-201ENST00000565993 HRO43593 1189 aa12.02□□□□□ -0.49
AC055855.2-201ENST00000565993 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
AC055855.2-201ENST00000565993 RYDENQ9NUL5 291 aaKnown RBP12.02□□□□□ -0.49
AC055855.2-201ENST00000565993 PLA2G2EQ9NZK7 142 aa12.02□□□□□ -0.49
AC055855.2-201ENST00000565993 PSEN2P49810 448 aa12□□□□□ -0.49
AC055855.2-201ENST00000565993 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
AC055855.2-201ENST00000565993 KCNH8Q96L42 1107 aa12□□□□□ -0.49
AC055855.2-201ENST00000565993 NISCHQ9Y2I1 1504 aa11.98□□□□□ -0.49
AC055855.2-201ENST00000565993 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
AC055855.2-201ENST00000565993 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
AC055855.2-201ENST00000565993 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
AC055855.2-201ENST00000565993 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
AC055855.2-201ENST00000565993 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
AC055855.2-201ENST00000565993 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
AC055855.2-201ENST00000565993 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
AC055855.2-201ENST00000565993 KCTD12Q96CX2 325 aaKnown RBP11.89□□□□□ -0.51
AC055855.2-201ENST00000565993 SLC4A5Q9BY07 1137 aa11.88□□□□□ -0.51
AC055855.2-201ENST00000565993 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
AC055855.2-201ENST00000565993 VPS9D1Q9Y2B5 631 aa11.88□□□□□ -0.51
AC055855.2-201ENST00000565993 ZNF454Q8N9F8 522 aa11.87□□□□□ -0.51
AC055855.2-201ENST00000565993 UPF1Q92900 1129 aaKnown RBP eCLIP11.87□□□□□ -0.51
AC055855.2-201ENST00000565993 PDE4AP27815 886 aa11.84□□□□□ -0.51
AC055855.2-201ENST00000565993 FOSBP53539 338 aa11.84□□□□□ -0.51
AC055855.2-201ENST00000565993 PTPREP23469 700 aa11.82□□□□□ -0.52
AC055855.2-201ENST00000565993 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
AC055855.2-201ENST00000565993 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
AC055855.2-201ENST00000565993 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
AC055855.2-201ENST00000565993 BHMG1C9JSJ3 638 aaPredicted RBP11.78□□□□□ -0.52
AC055855.2-201ENST00000565993 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
AC055855.2-201ENST00000565993 EVI5O60447 810 aa11.76□□□□□ -0.53
AC055855.2-201ENST00000565993 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
AC055855.2-201ENST00000565993 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
AC055855.2-201ENST00000565993 PTPN5P54829 565 aa11.75□□□□□ -0.53
AC055855.2-201ENST00000565993 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
AC055855.2-201ENST00000565993 THSD4Q6ZMP0 1018 aa11.74□□□□□ -0.53
AC055855.2-201ENST00000565993 GOLGA8CPA6NN73 597 aa11.73□□□□□ -0.53
AC055855.2-201ENST00000565993 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
AC055855.2-201ENST00000565993 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
AC055855.2-201ENST00000565993 RGS20O76081 388 aa11.72□□□□□ -0.53
AC055855.2-201ENST00000565993 MFSD10Q14728 455 aa11.72□□□□□ -0.53
AC055855.2-201ENST00000565993 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
AC055855.2-201ENST00000565993 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
AC055855.2-201ENST00000565993 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
AC055855.2-201ENST00000565993 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
AC055855.2-201ENST00000565993 WNT2BQ93097 391 aa11.7□□□□□ -0.54
AC055855.2-201ENST00000565993 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
AC055855.2-201ENST00000565993 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
AC055855.2-201ENST00000565993 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
AC055855.2-201ENST00000565993 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
AC055855.2-201ENST00000565993 A0A0G2JS52 829 aa11.62□□□□□ -0.55
AC055855.2-201ENST00000565993 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
AC055855.2-201ENST00000565993 PHF14O94880 888 aa11.59□□□□□ -0.55
AC055855.2-201ENST00000565993 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
AC055855.2-201ENST00000565993 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms