RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 ARHGAP5Q13017 1502 aa25.48■■□□□ 1.67
SPSB3-205ENST00000564070 EFCAB2Q5VUJ9 269 aa25.48■■□□□ 1.67
SPSB3-205ENST00000564070 EHBP1L1Q8N3D4 1523 aa25.47■■□□□ 1.67
SPSB3-205ENST00000564070 RICTORQ6R327 1708 aa25.47■■□□□ 1.67
SPSB3-205ENST00000564070 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
SPSB3-205ENST00000564070 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
SPSB3-205ENST00000564070 CDC42BPAQ5VT25 1732 aa25.43■■□□□ 1.66
SPSB3-205ENST00000564070 ADAMTSL3P82987 1691 aa25.42■■□□□ 1.66
SPSB3-205ENST00000564070 ARID4BQ4LE39 1312 aaPredicted RBP25.42■■□□□ 1.66
SPSB3-205ENST00000564070 SCAPERQ9BY12 1400 aa25.42■■□□□ 1.66
SPSB3-205ENST00000564070 ZMYM4Q5VZL5 1548 aa25.41■■□□□ 1.66
SPSB3-205ENST00000564070 POGZQ7Z3K3 1410 aa25.4■■□□□ 1.66
SPSB3-205ENST00000564070 MAP3K1Q13233 1512 aa25.38■■□□□ 1.65
SPSB3-205ENST00000564070 GPATCH8Q9UKJ3 1502 aaKnown RBP25.38■■□□□ 1.65
SPSB3-205ENST00000564070 PTPRMP28827 1452 aa25.38■■□□□ 1.65
SPSB3-205ENST00000564070 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
SPSB3-205ENST00000564070 ARHGEF40Q8TER5 1519 aa25.36■■□□□ 1.65
SPSB3-205ENST00000564070 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
SPSB3-205ENST00000564070 ILDR1Q86SU0 546 aaPredicted RBP25.35■■□□□ 1.65
SPSB3-205ENST00000564070 ABCC1P33527 1531 aa25.35■■□□□ 1.65
SPSB3-205ENST00000564070 YEATS2Q9ULM3 1422 aa25.35■■□□□ 1.65
SPSB3-205ENST00000564070 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
SPSB3-205ENST00000564070 ZNF518AQ6AHZ1 1483 aa25.34■■□□□ 1.65
SPSB3-205ENST00000564070 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
SPSB3-205ENST00000564070 SUPT6HQ7KZ85 1726 aaKnown RBP25.33■■□□□ 1.65
SPSB3-205ENST00000564070 LRRC9Q6ZRR7 1453 aa25.32■■□□□ 1.64
SPSB3-205ENST00000564070 SIGLEC1Q9BZZ2 1709 aa25.32■■□□□ 1.64
SPSB3-205ENST00000564070 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
SPSB3-205ENST00000564070 ZFYVE16Q7Z3T8 1539 aa25.3■■□□□ 1.64
SPSB3-205ENST00000564070 KDM5CP41229 1560 aa25.3■■□□□ 1.64
SPSB3-205ENST00000564070 SAMD9LQ8IVG5 1584 aa25.3■■□□□ 1.64
SPSB3-205ENST00000564070 NCOA2Q15596 1464 aa25.28■■□□□ 1.64
SPSB3-205ENST00000564070 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
SPSB3-205ENST00000564070 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
SPSB3-205ENST00000564070 PLEKHH2Q8IVE3 1493 aa25.25■■□□□ 1.63
SPSB3-205ENST00000564070 MLECQ14165 292 aa25.24■■□□□ 1.63
SPSB3-205ENST00000564070 PLPPR3Q6T4P5 718 aa25.24■■□□□ 1.63
SPSB3-205ENST00000564070 ZNF777Q9ULD5 760 aaPredicted RBP25.24■■□□□ 1.63
SPSB3-205ENST00000564070 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
SPSB3-205ENST00000564070 TRAPPC8Q9Y2L5 1435 aa25.23■■□□□ 1.63
SPSB3-205ENST00000564070 AFAP1Q8N556 730 aa25.23■■□□□ 1.63
SPSB3-205ENST00000564070 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
SPSB3-205ENST00000564070 KIAA1107Q9UPP5 1409 aa25.22■■□□□ 1.63
SPSB3-205ENST00000564070 APLP2Q06481 763 aa25.22■■□□□ 1.63
SPSB3-205ENST00000564070 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.62
SPSB3-205ENST00000564070 MLH3Q9UHC1 1453 aa25.2■■□□□ 1.62
SPSB3-205ENST00000564070 ATP10AO60312 1499 aa25.17■■□□□ 1.62
SPSB3-205ENST00000564070 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
SPSB3-205ENST00000564070 HNRNPMP52272 730 aaKnown RBP eCLIP25.14■■□□□ 1.62
SPSB3-205ENST00000564070 LMTK3Q96Q04 1460 aa25.14■■□□□ 1.61
SPSB3-205ENST00000564070 DIP2CQ9Y2E4 1556 aa25.14■■□□□ 1.61
SPSB3-205ENST00000564070 ABCA6Q8N139 1617 aa25.12■■□□□ 1.61
SPSB3-205ENST00000564070 MYT1LQ9UL68 1186 aa25.12■■□□□ 1.61
SPSB3-205ENST00000564070 ZNF644Q9H582 1327 aaPredicted RBP25.12■■□□□ 1.61
SPSB3-205ENST00000564070 KIDINS220Q9ULH0 1771 aa25.11■■□□□ 1.61
SPSB3-205ENST00000564070 REREQ9P2R6 1566 aa25.11■■□□□ 1.61
SPSB3-205ENST00000564070 CAMSAP2Q08AD1 1489 aa25.11■■□□□ 1.61
SPSB3-205ENST00000564070 MBD5Q9P267 1494 aa25.1■■□□□ 1.61
SPSB3-205ENST00000564070 HSPA2P54652 639 aa25.1■■□□□ 1.61
SPSB3-205ENST00000564070 MYOM3Q5VTT5 1437 aa25.09■■□□□ 1.61
SPSB3-205ENST00000564070 SPAG9O60271 1321 aaKnown RBP25.08■■□□□ 1.6
SPSB3-205ENST00000564070 INO80Q9ULG1 1556 aaPredicted RBP25.07■■□□□ 1.6
SPSB3-205ENST00000564070 ATP7AQ04656 1500 aa25.07■■□□□ 1.6
SPSB3-205ENST00000564070 FER1L4A9Z1Z3 1794 aa25.06■■□□□ 1.6
SPSB3-205ENST00000564070 MIA2Q96PC5 1412 aa25.06■■□□□ 1.6
SPSB3-205ENST00000564070 CEBPAP49715 358 aaPredicted RBP25.04■■□□□ 1.6
SPSB3-205ENST00000564070 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
SPSB3-205ENST00000564070 ARHGEF5Q12774 1597 aa25.02■■□□□ 1.6
SPSB3-205ENST00000564070 RSPH4AQ5TD94 716 aa25.02■■□□□ 1.6
SPSB3-205ENST00000564070 AGLP35573 1532 aa25.01■■□□□ 1.59
SPSB3-205ENST00000564070 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
SPSB3-205ENST00000564070 ADGBQ8N7X0 1667 aa24.94■■□□□ 1.58
SPSB3-205ENST00000564070 PLXNC1O60486 1568 aa24.94■■□□□ 1.58
SPSB3-205ENST00000564070 A2MP01023 1474 aa24.93■■□□□ 1.58
SPSB3-205ENST00000564070 FGD6Q6ZV73 1430 aa24.93■■□□□ 1.58
SPSB3-205ENST00000564070 PTPN23Q9H3S7 1636 aa24.93■■□□□ 1.58
SPSB3-205ENST00000564070 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.58
SPSB3-205ENST00000564070 MAST1Q9Y2H9 1570 aa24.89■■□□□ 1.58
SPSB3-205ENST00000564070 TSPY4P0CV99 314 aa24.89■■□□□ 1.58
SPSB3-205ENST00000564070 TSPY10P0CW01 314 aa24.89■■□□□ 1.58
SPSB3-205ENST00000564070 FBXO41Q8TF61 875 aa24.89■■□□□ 1.58
SPSB3-205ENST00000564070 DHX29Q7Z478 1369 aaKnown RBP24.83■■□□□ 1.57
SPSB3-205ENST00000564070 CROCC2H7BZ55 1655 aa24.83■■□□□ 1.57
SPSB3-205ENST00000564070 PREX1Q8TCU6 1659 aa24.83■■□□□ 1.57
SPSB3-205ENST00000564070 DNMT1P26358 1616 aaKnown RBP24.82■■□□□ 1.56
SPSB3-205ENST00000564070 SHANK2Q9UPX8 1470 aa24.82■■□□□ 1.56
SPSB3-205ENST00000564070 C3P01024 1663 aa24.8■■□□□ 1.56
SPSB3-205ENST00000564070 ABCC5O15440 1437 aa24.79■■□□□ 1.56
SPSB3-205ENST00000564070 DAPK1P53355 1430 aa24.78■■□□□ 1.56
SPSB3-205ENST00000564070 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
SPSB3-205ENST00000564070 ESF1Q9H501 851 aaKnown RBP24.78■■□□□ 1.56
SPSB3-205ENST00000564070 UHRF1BP1Q6BDS2 1440 aa24.76■■□□□ 1.55
SPSB3-205ENST00000564070 MROH2AA6NES4 1674 aa24.74■■□□□ 1.55
SPSB3-205ENST00000564070 STRCQ7RTU9 1775 aa24.73■■□□□ 1.55
SPSB3-205ENST00000564070 GGT6Q6P531 493 aa24.72■■□□□ 1.55
SPSB3-205ENST00000564070 PPP6R1Q9UPN7 881 aa24.72■■□□□ 1.55
SPSB3-205ENST00000564070 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
SPSB3-205ENST00000564070 CERKQ8TCT0 537 aa24.71■■□□□ 1.55
SPSB3-205ENST00000564070 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
SPSB3-205ENST00000564070 FAM50AQ14320 339 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms