RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
SH3GL3-206ENST00000564054 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
SH3GL3-206ENST00000564054 TMEM92Q6UXU6 159 aa12.41□□□□□ -0.42
SH3GL3-206ENST00000564054 STK24Q9Y6E0 443 aa12.41□□□□□ -0.42
SH3GL3-206ENST00000564054 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
SH3GL3-206ENST00000564054 STK25O00506 426 aa12.36□□□□□ -0.43
SH3GL3-206ENST00000564054 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
SH3GL3-206ENST00000564054 GPR153Q6NV75 609 aa12.32□□□□□ -0.44
SH3GL3-206ENST00000564054 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
SH3GL3-206ENST00000564054 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
SH3GL3-206ENST00000564054 MFRPQ9BY79 579 aa12.29□□□□□ -0.44
SH3GL3-206ENST00000564054 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
SH3GL3-206ENST00000564054 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
SH3GL3-206ENST00000564054 RGL2O15211 777 aa12.21□□□□□ -0.45
SH3GL3-206ENST00000564054 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
SH3GL3-206ENST00000564054 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
SH3GL3-206ENST00000564054 PKD2Q13563 968 aa12.19□□□□□ -0.46
SH3GL3-206ENST00000564054 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
SH3GL3-206ENST00000564054 TMC2Q8TDI7 906 aa12.18□□□□□ -0.46
SH3GL3-206ENST00000564054 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.461e-7■■■■■ 27.2
SH3GL3-206ENST00000564054 PTGER2P43116 358 aa12.17□□□□□ -0.46
SH3GL3-206ENST00000564054 KIF3CO14782 793 aa12.16□□□□□ -0.46
SH3GL3-206ENST00000564054 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
SH3GL3-206ENST00000564054 NUDT7P0C024 238 aa12.13□□□□□ -0.47
SH3GL3-206ENST00000564054 SLC34A2O95436 690 aa12.09□□□□□ -0.47
SH3GL3-206ENST00000564054 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
SH3GL3-206ENST00000564054 LSM11P83369 360 aaKnown RBP eCLIP12.07□□□□□ -0.48
SH3GL3-206ENST00000564054 PBX2P40425 430 aa12.06□□□□□ -0.48
SH3GL3-206ENST00000564054 LHX6Q9UPM6 363 aa12.06□□□□□ -0.48
SH3GL3-206ENST00000564054 PPP1R37O75864 691 aa12.05□□□□□ -0.48
SH3GL3-206ENST00000564054 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
SH3GL3-206ENST00000564054 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
SH3GL3-206ENST00000564054 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
SH3GL3-206ENST00000564054 FOXK1P85037 733 aa11.94□□□□□ -0.5
SH3GL3-206ENST00000564054 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
SH3GL3-206ENST00000564054 TBC1D12O60347 775 aa11.93□□□□□ -0.5
SH3GL3-206ENST00000564054 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
SH3GL3-206ENST00000564054 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
SH3GL3-206ENST00000564054 PTCD2Q8WV60 388 aaKnown RBP11.93□□□□□ -0.5
SH3GL3-206ENST00000564054 POTEEQ6S8J3 1075 aa11.92□□□□□ -0.5
SH3GL3-206ENST00000564054 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
SH3GL3-206ENST00000564054 ADGRD1Q6QNK2 874 aa11.88□□□□□ -0.51
SH3GL3-206ENST00000564054 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
SH3GL3-206ENST00000564054 DSG2Q14126 1118 aa11.87□□□□□ -0.51
SH3GL3-206ENST00000564054 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
SH3GL3-206ENST00000564054 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
SH3GL3-206ENST00000564054 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
SH3GL3-206ENST00000564054 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
SH3GL3-206ENST00000564054 STAC3Q96MF2 364 aa11.83□□□□□ -0.52
SH3GL3-206ENST00000564054 TK2O00142 265 aa11.82□□□□□ -0.52
SH3GL3-206ENST00000564054 PSEN2P49810 448 aa11.81□□□□□ -0.52
SH3GL3-206ENST00000564054 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
SH3GL3-206ENST00000564054 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
SH3GL3-206ENST00000564054 UPF1Q92900 1129 aaKnown RBP eCLIP11.77□□□□□ -0.53
SH3GL3-206ENST00000564054 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
SH3GL3-206ENST00000564054 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
SH3GL3-206ENST00000564054 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
SH3GL3-206ENST00000564054 HRO43593 1189 aa11.74□□□□□ -0.53
SH3GL3-206ENST00000564054 OXER1Q8TDS5 423 aa11.74□□□□□ -0.53
SH3GL3-206ENST00000564054 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
SH3GL3-206ENST00000564054 KCTD12Q96CX2 325 aaKnown RBP11.72□□□□□ -0.53
SH3GL3-206ENST00000564054 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
SH3GL3-206ENST00000564054 PDE4AP27815 886 aa11.71□□□□□ -0.53
SH3GL3-206ENST00000564054 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
SH3GL3-206ENST00000564054 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
SH3GL3-206ENST00000564054 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
SH3GL3-206ENST00000564054 PTPREP23469 700 aa11.65□□□□□ -0.54
SH3GL3-206ENST00000564054 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
SH3GL3-206ENST00000564054 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
SH3GL3-206ENST00000564054 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
SH3GL3-206ENST00000564054 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
SH3GL3-206ENST00000564054 GOLGA8CPA6NN73 597 aa11.61□□□□□ -0.55
SH3GL3-206ENST00000564054 FOSBP53539 338 aa11.61□□□□□ -0.55
SH3GL3-206ENST00000564054 EVI5O60447 810 aa11.6□□□□□ -0.55
SH3GL3-206ENST00000564054 PTPN5P54829 565 aa11.6□□□□□ -0.55
SH3GL3-206ENST00000564054 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
SH3GL3-206ENST00000564054 SLC4A5Q9BY07 1137 aa11.6□□□□□ -0.55
SH3GL3-206ENST00000564054 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
SH3GL3-206ENST00000564054 JPH4Q96JJ6 628 aa11.59□□□□□ -0.55
SH3GL3-206ENST00000564054 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
SH3GL3-206ENST00000564054 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
SH3GL3-206ENST00000564054 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
SH3GL3-206ENST00000564054 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
SH3GL3-206ENST00000564054 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
SH3GL3-206ENST00000564054 WNT2BQ93097 391 aa11.53□□□□□ -0.56
SH3GL3-206ENST00000564054 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
SH3GL3-206ENST00000564054 BHMG1C9JSJ3 638 aaPredicted RBP11.52□□□□□ -0.57
SH3GL3-206ENST00000564054 MFSD10Q14728 455 aa11.51□□□□□ -0.57
SH3GL3-206ENST00000564054 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
SH3GL3-206ENST00000564054 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
SH3GL3-206ENST00000564054 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
SH3GL3-206ENST00000564054 FBXW7Q969H0 707 aa11.44□□□□□ -0.58
SH3GL3-206ENST00000564054 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
SH3GL3-206ENST00000564054 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
SH3GL3-206ENST00000564054 PHF14O94880 888 aa11.42□□□□□ -0.58
SH3GL3-206ENST00000564054 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
SH3GL3-206ENST00000564054 RABGEF1Q9UJ41 708 aa11.42□□□□□ -0.58
SH3GL3-206ENST00000564054 RGS20O76081 388 aa11.4□□□□□ -0.58
SH3GL3-206ENST00000564054 ANKK1Q8NFD2 765 aa11.4□□□□□ -0.58
SH3GL3-206ENST00000564054 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms