RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 HNRNPUQ00839 825 aaKnown RBP eCLIP25.77■■□□□ 1.72
BBS4-204ENST00000562084 PPP4R2Q9NY27 417 aa25.76■■□□□ 1.71
BBS4-204ENST00000562084 FMN1Q68DA7 1419 aa25.75■■□□□ 1.71
BBS4-204ENST00000562084 KDM5BQ9UGL1 1544 aa25.74■■□□□ 1.71
BBS4-204ENST00000562084 NCOA2Q15596 1464 aa25.72■■□□□ 1.71
BBS4-204ENST00000562084 PLB1Q6P1J6 1458 aa25.68■■□□□ 1.7
BBS4-204ENST00000562084 NAIPQ13075 1403 aa25.67■■□□□ 1.7
BBS4-204ENST00000562084 ABCA8O94911 1581 aa25.65■■□□□ 1.7
BBS4-204ENST00000562084 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.69
BBS4-204ENST00000562084 ADCY10Q96PN6 1610 aa25.63■■□□□ 1.69
BBS4-204ENST00000562084 MYOM3Q5VTT5 1437 aa25.61■■□□□ 1.69
BBS4-204ENST00000562084 HECW1Q76N89 1606 aa25.61■■□□□ 1.69
BBS4-204ENST00000562084 RAPGEF6Q8TEU7 1601 aa25.61■■□□□ 1.69
BBS4-204ENST00000562084 PTPRKQ15262 1439 aa25.61■■□□□ 1.69
BBS4-204ENST00000562084 MTUS2Q5JR59 1369 aa25.6■■□□□ 1.69
BBS4-204ENST00000562084 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
BBS4-204ENST00000562084 ABCC2Q92887 1545 aa25.6■■□□□ 1.69
BBS4-204ENST00000562084 UHRF1BP1LA0JNW5 1464 aa25.59■■□□□ 1.69
BBS4-204ENST00000562084 WASHC2AQ641Q2 1341 aa25.58■■□□□ 1.69
BBS4-204ENST00000562084 SUPT6HQ7KZ85 1726 aaKnown RBP25.58■■□□□ 1.69
BBS4-204ENST00000562084 AKNAQ7Z591 1439 aa25.58■■□□□ 1.69
BBS4-204ENST00000562084 GCC2Q8IWJ2 1684 aa25.57■■□□□ 1.68
BBS4-204ENST00000562084 EHBP1L1Q8N3D4 1523 aa25.57■■□□□ 1.68
BBS4-204ENST00000562084 ZBED9Q6R2W3 1325 aa25.56■■□□□ 1.68
BBS4-204ENST00000562084 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.68
BBS4-204ENST00000562084 HSPA5P11021 654 aaKnown RBP25.54■■□□□ 1.68
BBS4-204ENST00000562084 NUP153P49790 1475 aaKnown RBP25.52■■□□□ 1.68
BBS4-204ENST00000562084 ARID3CA6NKF2 412 aa25.51■■□□□ 1.67
BBS4-204ENST00000562084 IRX6P78412 446 aaPredicted RBP25.51■■□□□ 1.67
BBS4-204ENST00000562084 NCOA1Q15788 1441 aa25.5■■□□□ 1.67
BBS4-204ENST00000562084 TCOF1Q13428 1488 aaKnown RBP25.49■■□□□ 1.67
BBS4-204ENST00000562084 LRRIQ1Q96JM4 1722 aa25.48■■□□□ 1.67
BBS4-204ENST00000562084 ZCCHC11Q5TAX3 1644 aaKnown RBP25.46■■□□□ 1.67
BBS4-204ENST00000562084 ATP10BO94823 1461 aa25.46■■□□□ 1.67
BBS4-204ENST00000562084 NPM1P06748 294 aaKnown RBP eCLIP25.45■■□□□ 1.67
BBS4-204ENST00000562084 PRKRIP1Q9H875 184 aaPredicted RBP25.45■■□□□ 1.67
BBS4-204ENST00000562084 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.66
BBS4-204ENST00000562084 CCDC7Q96M83 1385 aa25.44■■□□□ 1.66
BBS4-204ENST00000562084 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
BBS4-204ENST00000562084 CDK13Q14004 1512 aaKnown RBP25.41■■□□□ 1.66
BBS4-204ENST00000562084 NOP58Q9Y2X3 529 aaKnown RBP25.41■■□□□ 1.66
BBS4-204ENST00000562084 DEKP35659 375 aaKnown RBP25.4■■□□□ 1.66
BBS4-204ENST00000562084 DENND4BO75064 1496 aaPredicted RBP25.39■■□□□ 1.65
BBS4-204ENST00000562084 SMG6Q86US8 1419 aaKnown RBP25.37■■□□□ 1.65
BBS4-204ENST00000562084 MRS2Q9HD23 443 aa25.36■■□□□ 1.65
BBS4-204ENST00000562084 B4GALNT3Q6L9W6 998 aa25.33■■□□□ 1.65
BBS4-204ENST00000562084 ASXL2Q76L83 1435 aa25.32■■□□□ 1.64
BBS4-204ENST00000562084 MIA2Q96PC5 1412 aa25.32■■□□□ 1.64
BBS4-204ENST00000562084 CCDC184Q52MB2 194 aa25.31■■□□□ 1.64
BBS4-204ENST00000562084 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
BBS4-204ENST00000562084 FAM9BQ8IZU0 186 aa25.3■■□□□ 1.64
BBS4-204ENST00000562084 RPRD2Q5VT52 1461 aaKnown RBP25.28■■□□□ 1.64
BBS4-204ENST00000562084 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
BBS4-204ENST00000562084 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
BBS4-204ENST00000562084 MPHOSPH9Q99550 1183 aa25.26■■□□□ 1.63
BBS4-204ENST00000562084 L3MBTL2Q969R5 705 aa25.26■■□□□ 1.63
BBS4-204ENST00000562084 WDR7Q9Y4E6 1490 aa25.25■■□□□ 1.63
BBS4-204ENST00000562084 ANP32AP39687 249 aaKnown RBP25.24■■□□□ 1.63
BBS4-204ENST00000562084 MAGI3Q5TCQ9 1506 aa25.24■■□□□ 1.63
BBS4-204ENST00000562084 TEX14Q8IWB6 1497 aa25.23■■□□□ 1.63
BBS4-204ENST00000562084 ROCK1Q13464 1354 aa25.22■■□□□ 1.63
BBS4-204ENST00000562084 NUDCQ9Y266 331 aa25.22■■□□□ 1.63
BBS4-204ENST00000562084 RRP7BPQ9NSQ0 103 aa25.21■■□□□ 1.63
BBS4-204ENST00000562084 KDM6BO15054 1643 aa25.21■■□□□ 1.63
BBS4-204ENST00000562084 C11orf95C9JLR9 678 aaPredicted RBP25.21■■□□□ 1.63
BBS4-204ENST00000562084 IPO9Q96P70 1041 aaKnown RBP25.21■■□□□ 1.63
BBS4-204ENST00000562084 ANKRD30BQ9BXX2 1392 aa25.2■■□□□ 1.63
BBS4-204ENST00000562084 KIF7Q2M1P5 1343 aa25.19■■□□□ 1.62
BBS4-204ENST00000562084 TROQ12816 1431 aaPredicted RBP25.18■■□□□ 1.62
BBS4-204ENST00000562084 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
BBS4-204ENST00000562084 ABCC10Q5T3U5 1492 aa25.16■■□□□ 1.62
BBS4-204ENST00000562084 DIP2BQ9P265 1576 aa25.15■■□□□ 1.62
BBS4-204ENST00000562084 KIF13AQ9H1H9 1805 aa25.14■■□□□ 1.62
BBS4-204ENST00000562084 CCDC136Q96JN2 1154 aa25.14■■□□□ 1.61
BBS4-204ENST00000562084 RTL5Q5HYW3 569 aaPredicted RBP25.13■■□□□ 1.61
BBS4-204ENST00000562084 KIF14Q15058 1648 aa25.12■■□□□ 1.61
BBS4-204ENST00000562084 PAK3O75914 559 aaPredicted RBP25.11■■□□□ 1.61
BBS4-204ENST00000562084 FAM69CQ0P6D2 419 aa25.11■■□□□ 1.61
BBS4-204ENST00000562084 ZBTB47Q9UFB7 747 aaPredicted RBP25.11■■□□□ 1.61
BBS4-204ENST00000562084 DHX29Q7Z478 1369 aaKnown RBP25.1■■□□□ 1.61
BBS4-204ENST00000562084 CHIC2Q9UKJ5 165 aa25.1■■□□□ 1.61
BBS4-204ENST00000562084 NBPF8Q3BBV2 869 aa25.09■■□□□ 1.61
BBS4-204ENST00000562084 GLI2P10070 1586 aa25.09■■□□□ 1.61
BBS4-204ENST00000562084 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
BBS4-204ENST00000562084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.07■■□□□ 1.6
BBS4-204ENST00000562084 DNMT1P26358 1616 aaKnown RBP25.07■■□□□ 1.6
BBS4-204ENST00000562084 NBR1Q14596 966 aa25.06■■□□□ 1.6
BBS4-204ENST00000562084 ROCK2O75116 1388 aaKnown RBP25.06■■□□□ 1.6
BBS4-204ENST00000562084 ABCA9Q8IUA7 1624 aa25.06■■□□□ 1.6
BBS4-204ENST00000562084 DAPK1P53355 1430 aa25.04■■□□□ 1.6
BBS4-204ENST00000562084 TTC37Q6PGP7 1564 aa25.04■■□□□ 1.6
BBS4-204ENST00000562084 MBD5Q9P267 1494 aa25.04■■□□□ 1.6
BBS4-204ENST00000562084 MAP3K4Q9Y6R4 1608 aa25.02■■□□□ 1.6
BBS4-204ENST00000562084 KTN1Q86UP2 1357 aaKnown RBP25.01■■□□□ 1.59
BBS4-204ENST00000562084 USP35Q9P2H5 1018 aa24.99■■□□□ 1.59
BBS4-204ENST00000562084 TSPOAP1O95153 1857 aa24.99■■□□□ 1.59
BBS4-204ENST00000562084 CD109Q6YHK3 1445 aa24.98■■□□□ 1.59
BBS4-204ENST00000562084 TCERG1O14776 1098 aaKnown RBP24.96■■□□□ 1.59
BBS4-204ENST00000562084 ABCC5O15440 1437 aa24.95■■□□□ 1.58
BBS4-204ENST00000562084 CDC42BPAQ5VT25 1732 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms