RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 ABCC5O15440 1437 aa33.28■■■□□ 2.92
PBX1-218ENST00000560469 PREX2Q70Z35 1606 aa33.27■■■□□ 2.92
PBX1-218ENST00000560469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.27■■■□□ 2.92
PBX1-218ENST00000560469 GCC2Q8IWJ2 1684 aa33.25■■■□□ 2.91
PBX1-218ENST00000560469 ROCK1Q13464 1354 aa33.24■■■□□ 2.91
PBX1-218ENST00000560469 ZNF777Q9ULD5 760 aaPredicted RBP33.23■■■□□ 2.91
PBX1-218ENST00000560469 TTC37Q6PGP7 1564 aa33.23■■■□□ 2.91
PBX1-218ENST00000560469 CDC42BPBQ9Y5S2 1711 aa33.21■■■□□ 2.91
PBX1-218ENST00000560469 CHIC2Q9UKJ5 165 aa33.21■■■□□ 2.91
PBX1-218ENST00000560469 MYO5CQ9NQX4 1742 aa33.19■■■□□ 2.9
PBX1-218ENST00000560469 CROCC2H7BZ55 1655 aa33.17■■■□□ 2.9
PBX1-218ENST00000560469 KCNH8Q96L42 1107 aa33.17■■■□□ 2.9
PBX1-218ENST00000560469 WDR7Q9Y4E6 1490 aa33.16■■■□□ 2.9
PBX1-218ENST00000560469 RRP7BPQ9NSQ0 103 aa33.15■■■□□ 2.9
PBX1-218ENST00000560469 ADGBQ8N7X0 1667 aa33.13■■■□□ 2.89
PBX1-218ENST00000560469 ARHGEF5Q12774 1597 aa33.11■■■□□ 2.89
PBX1-218ENST00000560469 ARHGAP5Q13017 1502 aa33.11■■■□□ 2.89
PBX1-218ENST00000560469 SAMD9LQ8IVG5 1584 aa33.11■■■□□ 2.89
PBX1-218ENST00000560469 ACIN1Q9UKV3 1341 aaKnown RBP33.1■■■□□ 2.89
PBX1-218ENST00000560469 NPM1P06748 294 aaKnown RBP eCLIP33.1■■■□□ 2.89
PBX1-218ENST00000560469 ADGRL2O95490 1459 aa33.09■■■□□ 2.89
PBX1-218ENST00000560469 SHANK2Q9UPX8 1470 aa33.09■■■□□ 2.89
PBX1-218ENST00000560469 PLCH2O75038 1416 aa33.08■■■□□ 2.89
PBX1-218ENST00000560469 MAPKBP1O60336 1514 aa33.07■■■□□ 2.89
PBX1-218ENST00000560469 RSPH4AQ5TD94 716 aa33.05■■■□□ 2.88
PBX1-218ENST00000560469 PLEKHH2Q8IVE3 1493 aa33.05■■■□□ 2.88
PBX1-218ENST00000560469 ASXL2Q76L83 1435 aa33.05■■■□□ 2.88
PBX1-218ENST00000560469 MBD5Q9P267 1494 aa33.04■■■□□ 2.88
PBX1-218ENST00000560469 ARAP3Q8WWN8 1544 aa33.03■■■□□ 2.88
PBX1-218ENST00000560469 NCOA1Q15788 1441 aa33.03■■■□□ 2.88
PBX1-218ENST00000560469 ANKRD30AQ9BXX3 1397 aa33.01■■■□□ 2.88
PBX1-218ENST00000560469 KIAA1107Q9UPP5 1409 aa33■■■□□ 2.87
PBX1-218ENST00000560469 CCDC141Q6ZP82 1450 aa33■■■□□ 2.87
PBX1-218ENST00000560469 ABCA9Q8IUA7 1624 aa32.99■■■□□ 2.87
PBX1-218ENST00000560469 TSPY4P0CV99 314 aa32.99■■■□□ 2.87
PBX1-218ENST00000560469 TSPY10P0CW01 314 aa32.99■■■□□ 2.87
PBX1-218ENST00000560469 KDM6BO15054 1643 aa32.99■■■□□ 2.87
PBX1-218ENST00000560469 C9orf84Q5VXU9 1444 aa32.98■■■□□ 2.87
PBX1-218ENST00000560469 HNRNPMP52272 730 aaKnown RBP eCLIP32.98■■■□□ 2.87
PBX1-218ENST00000560469 EFCAB2Q5VUJ9 269 aa32.97■■■□□ 2.87
PBX1-218ENST00000560469 RIMBP3CA6NJZ7 1639 aa32.96■■■□□ 2.87
PBX1-218ENST00000560469 RIMBP3BA6NNM3 1639 aa32.96■■■□□ 2.87
PBX1-218ENST00000560469 RIMBP3Q9UFD9 1639 aa32.96■■■□□ 2.87
PBX1-218ENST00000560469 SYCP2Q9BX26 1530 aa32.95■■■□□ 2.87
PBX1-218ENST00000560469 MAST1Q9Y2H9 1570 aa32.89■■■□□ 2.86
PBX1-218ENST00000560469 ABCC1P33527 1531 aa32.87■■■□□ 2.85
PBX1-218ENST00000560469 TRIM52Q96A61 297 aa32.87■■■□□ 2.85
PBX1-218ENST00000560469 CYB5RLQ6IPT4 315 aa32.82■■■□□ 2.84
PBX1-218ENST00000560469 ANKRD50Q9ULJ7 1429 aa32.81■■■□□ 2.84
PBX1-218ENST00000560469 ARHGEF12Q9NZN5 1544 aa32.81■■■□□ 2.84
PBX1-218ENST00000560469 FANCAO15360 1455 aa32.79■■■□□ 2.84
PBX1-218ENST00000560469 KIF15Q9NS87 1388 aa32.79■■■□□ 2.84
PBX1-218ENST00000560469 TIMELESSQ9UNS1 1208 aa32.76■■■□□ 2.84
PBX1-218ENST00000560469 MPHOSPH9Q99550 1183 aa32.75■■■□□ 2.83
PBX1-218ENST00000560469 PLXNC1O60486 1568 aa32.75■■■□□ 2.83
PBX1-218ENST00000560469 SIN3AQ96ST3 1273 aa32.72■■■□□ 2.83
PBX1-218ENST00000560469 DENND4BO75064 1496 aaPredicted RBP32.72■■■□□ 2.83
PBX1-218ENST00000560469 TRAPPC8Q9Y2L5 1435 aa32.69■■■□□ 2.82
PBX1-218ENST00000560469 CD109Q6YHK3 1445 aa32.68■■■□□ 2.82
PBX1-218ENST00000560469 CFAP74Q9C0B2 1584 aa32.68■■■□□ 2.82
PBX1-218ENST00000560469 NEUROD1Q13562 356 aa32.68■■■□□ 2.82
PBX1-218ENST00000560469 ADGRL1O94910 1474 aa32.65■■■□□ 2.82
PBX1-218ENST00000560469 RTEL1-TNFRSF6BF6WH68 1400 aa32.64■■■□□ 2.82
PBX1-218ENST00000560469 PZPP20742 1482 aa32.64■■■□□ 2.82
PBX1-218ENST00000560469 SLC4A1APQ9BWU0 796 aaKnown RBP32.62■■■□□ 2.81
PBX1-218ENST00000560469 KDM5DQ9BY66 1539 aa32.62■■■□□ 2.81
PBX1-218ENST00000560469 DUOX2Q9NRD8 1548 aa32.62■■■□□ 2.81
PBX1-218ENST00000560469 SCAPERQ9BY12 1400 aa32.6■■■□□ 2.81
PBX1-218ENST00000560469 SPAG9O60271 1321 aaKnown RBP32.59■■■□□ 2.81
PBX1-218ENST00000560469 GLI2P10070 1586 aa32.57■■■□□ 2.8
PBX1-218ENST00000560469 ZFYVE16Q7Z3T8 1539 aa32.56■■■□□ 2.8
PBX1-218ENST00000560469 AFAP1Q8N556 730 aa32.56■■■□□ 2.8
PBX1-218ENST00000560469 ZNF316A6NFI3 1004 aaPredicted RBP32.55■■■□□ 2.8
PBX1-218ENST00000560469 ERBINQ96RT1 1412 aa32.55■■■□□ 2.8
PBX1-218ENST00000560469 NUP155O75694 1391 aa32.55■■■□□ 2.8
PBX1-218ENST00000560469 TONSLQ96HA7 1378 aa32.55■■■□□ 2.8
PBX1-218ENST00000560469 ANKRD30BQ9BXX2 1392 aa32.52■■■□□ 2.8
PBX1-218ENST00000560469 INO80Q9ULG1 1556 aaPredicted RBP32.52■■■□□ 2.8
PBX1-218ENST00000560469 MAP3K4Q9Y6R4 1608 aa32.51■■■□□ 2.8
PBX1-218ENST00000560469 UNC13BO14795 1591 aa32.51■■■□□ 2.8
PBX1-218ENST00000560469 NEO1Q92859 1461 aa32.51■■■□□ 2.8
PBX1-218ENST00000560469 ATP7AQ04656 1500 aa32.5■■■□□ 2.79
PBX1-218ENST00000560469 ZNF518AQ6AHZ1 1483 aa32.48■■■□□ 2.79
PBX1-218ENST00000560469 FOXD1Q16676 465 aa32.47■■■□□ 2.79
PBX1-218ENST00000560469 PPP1R15AO75807 674 aaPredicted RBP32.45■■■□□ 2.79
PBX1-218ENST00000560469 PKD2Q13563 968 aa32.43■■■□□ 2.78
PBX1-218ENST00000560469 DIP2BQ9P265 1576 aa32.43■■■□□ 2.78
PBX1-218ENST00000560469 POGZQ7Z3K3 1410 aa32.42■■■□□ 2.78
PBX1-218ENST00000560469 FAM135AQ9P2D6 1515 aa32.41■■■□□ 2.78
PBX1-218ENST00000560469 RPRD2Q5VT52 1461 aaKnown RBP32.41■■■□□ 2.78
PBX1-218ENST00000560469 MAGI2Q86UL8 1455 aa32.4■■■□□ 2.78
PBX1-218ENST00000560469 KDM5CP41229 1560 aa32.39■■■□□ 2.78
PBX1-218ENST00000560469 IQGAP3Q86VI3 1631 aa32.38■■■□□ 2.77
PBX1-218ENST00000560469 KIDINS220Q9ULH0 1771 aa32.36■■■□□ 2.77
PBX1-218ENST00000560469 MYT1LQ9UL68 1186 aa32.35■■■□□ 2.77
PBX1-218ENST00000560469 FAM69CQ0P6D2 419 aa32.34■■■□□ 2.77
PBX1-218ENST00000560469 MLH3Q9UHC1 1453 aa32.33■■■□□ 2.77
PBX1-218ENST00000560469 EIF2AK4Q9P2K8 1649 aaKnown RBP32.32■■■□□ 2.76
PBX1-218ENST00000560469 DHX29Q7Z478 1369 aaKnown RBP32.31■■■□□ 2.76
PBX1-218ENST00000560469 HECW2Q9P2P5 1572 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms