RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 POTEHQ6S545 545 aa12.47□□□□□ -0.41
MARK3-220ENST00000560417 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
MARK3-220ENST00000560417 TESPA1A2RU30 521 aaPredicted RBP12.44□□□□□ -0.42
MARK3-220ENST00000560417 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
MARK3-220ENST00000560417 BOLA1Q9Y3E2 137 aa12.44□□□□□ -0.42
MARK3-220ENST00000560417 SEMA3EO15041 775 aa12.43□□□□□ -0.42
MARK3-220ENST00000560417 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
MARK3-220ENST00000560417 KIF3CO14782 793 aa12.4□□□□□ -0.42
MARK3-220ENST00000560417 PLCG2P16885 1265 aa12.4□□□□□ -0.42
MARK3-220ENST00000560417 FOXK1P85037 733 aa12.4□□□□□ -0.42
MARK3-220ENST00000560417 DSG2Q14126 1118 aa12.4□□□□□ -0.42
MARK3-220ENST00000560417 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
MARK3-220ENST00000560417 COLQQ9Y215 455 aaPredicted RBP12.37□□□□□ -0.43
MARK3-220ENST00000560417 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
MARK3-220ENST00000560417 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
MARK3-220ENST00000560417 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
MARK3-220ENST00000560417 EMILIN3Q9NT22 766 aa12.36□□□□□ -0.43
MARK3-220ENST00000560417 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
MARK3-220ENST00000560417 C2orf72A6NCS6 295 aa12.34□□□□□ -0.43
MARK3-220ENST00000560417 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
MARK3-220ENST00000560417 G3V3G9 751 aa12.32□□□□□ -0.44
MARK3-220ENST00000560417 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
MARK3-220ENST00000560417 SEC24BO95487 1268 aa12.31□□□□□ -0.44
MARK3-220ENST00000560417 C7P10643 843 aa12.31□□□□□ -0.44
MARK3-220ENST00000560417 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
MARK3-220ENST00000560417 PLPP6Q8IY26 295 aa12.3□□□□□ -0.44
MARK3-220ENST00000560417 DPYSL4O14531 572 aa12.28□□□□□ -0.44
MARK3-220ENST00000560417 PDIA6Q15084 440 aa12.28□□□□□ -0.44
MARK3-220ENST00000560417 SMYD5Q6GMV2 418 aa12.28□□□□□ -0.44
MARK3-220ENST00000560417 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
MARK3-220ENST00000560417 METRNQ9UJH8 293 aa12.26□□□□□ -0.45
MARK3-220ENST00000560417 SPDYE16A6NNV3 312 aaPredicted RBP12.25□□□□□ -0.45
MARK3-220ENST00000560417 MLLT3P42568 568 aaPredicted RBP12.25□□□□□ -0.45
MARK3-220ENST00000560417 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
MARK3-220ENST00000560417 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
MARK3-220ENST00000560417 ZMYND10O75800 440 aa12.17□□□□□ -0.46
MARK3-220ENST00000560417 RBM26Q5T8P6 1007 aaKnown RBP12.16□□□□□ -0.46
MARK3-220ENST00000560417 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
MARK3-220ENST00000560417 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
MARK3-220ENST00000560417 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
MARK3-220ENST00000560417 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
MARK3-220ENST00000560417 PTGER2P43116 358 aa12.1□□□□□ -0.47
MARK3-220ENST00000560417 GPIHBP1Q8IV16 184 aa12.1□□□□□ -0.47
MARK3-220ENST00000560417 PTCD2Q8WV60 388 aaKnown RBP12.1□□□□□ -0.47
MARK3-220ENST00000560417 SLC24A3Q9HC58 644 aa12.1□□□□□ -0.47
MARK3-220ENST00000560417 SLC34A2O95436 690 aa12.09□□□□□ -0.47
MARK3-220ENST00000560417 TBC1D12O60347 775 aa12.06□□□□□ -0.48
MARK3-220ENST00000560417 GPR37O15354 613 aa12.05□□□□□ -0.48
MARK3-220ENST00000560417 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
MARK3-220ENST00000560417 EVI5O60447 810 aa12.04□□□□□ -0.48
MARK3-220ENST00000560417 OSBPP22059 807 aa12.04□□□□□ -0.48
MARK3-220ENST00000560417 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
MARK3-220ENST00000560417 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
MARK3-220ENST00000560417 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
MARK3-220ENST00000560417 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
MARK3-220ENST00000560417 TMEM132AQ24JP5 1023 aa11.99□□□□□ -0.49
MARK3-220ENST00000560417 DDX12PQ92771 950 aa11.99□□□□□ -0.49
MARK3-220ENST00000560417 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
MARK3-220ENST00000560417 AK7Q96M32 723 aa11.97□□□□□ -0.49
MARK3-220ENST00000560417 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
MARK3-220ENST00000560417 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
MARK3-220ENST00000560417 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
MARK3-220ENST00000560417 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
MARK3-220ENST00000560417 PCDHGA4Q9Y5G9 962 aa11.93□□□□□ -0.5
MARK3-220ENST00000560417 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
MARK3-220ENST00000560417 KRI1Q8N9T8 703 aaKnown RBP11.92□□□□□ -0.5
MARK3-220ENST00000560417 PHF14O94880 888 aa11.9□□□□□ -0.5
MARK3-220ENST00000560417 TRIM66O15016 1216 aa11.88□□□□□ -0.51
MARK3-220ENST00000560417 GNPATO15228 680 aa11.88□□□□□ -0.51
MARK3-220ENST00000560417 FCHSD2O94868 740 aa11.88□□□□□ -0.51
MARK3-220ENST00000560417 HIC1Q14526 733 aa11.88□□□□□ -0.51
MARK3-220ENST00000560417 EPAS1Q99814 870 aa11.88□□□□□ -0.51
MARK3-220ENST00000560417 MINK1Q8N4C8 1332 aaPredicted RBP11.87□□□□□ -0.51
MARK3-220ENST00000560417 MAP2K5Q13163 448 aa11.87□□□□□ -0.51
MARK3-220ENST00000560417 PTGDRQ13258 359 aa11.87□□□□□ -0.51
MARK3-220ENST00000560417 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
MARK3-220ENST00000560417 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
MARK3-220ENST00000560417 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
MARK3-220ENST00000560417 FECHP22830 423 aa11.84□□□□□ -0.51
MARK3-220ENST00000560417 IRF6O14896 467 aa11.83□□□□□ -0.52
MARK3-220ENST00000560417 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
MARK3-220ENST00000560417 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
MARK3-220ENST00000560417 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
MARK3-220ENST00000560417 PDE4DQ08499 809 aa11.82□□□□□ -0.52
MARK3-220ENST00000560417 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
MARK3-220ENST00000560417 CCDC102AQ96A19 550 aa11.82□□□□□ -0.52
MARK3-220ENST00000560417 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
MARK3-220ENST00000560417 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
MARK3-220ENST00000560417 CDHR5Q9HBB8 845 aa11.81□□□□□ -0.52
MARK3-220ENST00000560417 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
MARK3-220ENST00000560417 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
MARK3-220ENST00000560417 FOSBP53539 338 aa11.8□□□□□ -0.52
MARK3-220ENST00000560417 GPR153Q6NV75 609 aa11.8□□□□□ -0.52
MARK3-220ENST00000560417 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
MARK3-220ENST00000560417 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
MARK3-220ENST00000560417 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
MARK3-220ENST00000560417 MAP3K7O43318 606 aa11.78□□□□□ -0.52
MARK3-220ENST00000560417 AMHR2Q16671 573 aa11.78□□□□□ -0.52
MARK3-220ENST00000560417 TSR1Q2NL82 804 aaKnown RBP11.77□□□□□ -0.53
MARK3-220ENST00000560417 ARSIQ5FYB1 569 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms