RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
RMDN3-207ENST00000558777 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
RMDN3-207ENST00000558777 DDX10Q13206 875 aaKnown RBP24.36■■□□□ 1.49
RMDN3-207ENST00000558777 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
RMDN3-207ENST00000558777 ADCY10Q96PN6 1610 aa24.32■■□□□ 1.48
RMDN3-207ENST00000558777 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
RMDN3-207ENST00000558777 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
RMDN3-207ENST00000558777 CFDP1Q9UEE9 299 aaPredicted RBP24.29■■□□□ 1.48
RMDN3-207ENST00000558777 ABCA8O94911 1581 aa24.29■■□□□ 1.48
RMDN3-207ENST00000558777 CAMSAP2Q08AD1 1489 aa24.28■■□□□ 1.48
RMDN3-207ENST00000558777 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
RMDN3-207ENST00000558777 KIF14Q15058 1648 aa24.26■■□□□ 1.47
RMDN3-207ENST00000558777 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
RMDN3-207ENST00000558777 KCNH8Q96L42 1107 aa24.22■■□□□ 1.47
RMDN3-207ENST00000558777 ATP10BO94823 1461 aa24.22■■□□□ 1.47
RMDN3-207ENST00000558777 ANKRD30BQ9BXX2 1392 aa24.21■■□□□ 1.47
RMDN3-207ENST00000558777 PLEKHD1A6NEE1 506 aa24.2■■□□□ 1.47
RMDN3-207ENST00000558777 NCOA1Q15788 1441 aa24.2■■□□□ 1.46
RMDN3-207ENST00000558777 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
RMDN3-207ENST00000558777 FOXD1Q16676 465 aa24.18■■□□□ 1.46
RMDN3-207ENST00000558777 ABCC10Q5T3U5 1492 aa24.17■■□□□ 1.46
RMDN3-207ENST00000558777 RPRD2Q5VT52 1461 aaKnown RBP24.16■■□□□ 1.46
RMDN3-207ENST00000558777 L3MBTL2Q969R5 705 aa24.15■■□□□ 1.46
RMDN3-207ENST00000558777 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
RMDN3-207ENST00000558777 ADGBQ8N7X0 1667 aa24.15■■□□□ 1.46
RMDN3-207ENST00000558777 CCER2I3L3R5 266 aa24.14■■□□□ 1.45
RMDN3-207ENST00000558777 SLC4A1APQ9BWU0 796 aaKnown RBP24.14■■□□□ 1.45
RMDN3-207ENST00000558777 CROCC2H7BZ55 1655 aa24.13■■□□□ 1.45
RMDN3-207ENST00000558777 ANP32CO43423 234 aa24.13■■□□□ 1.45
RMDN3-207ENST00000558777 PTPRGP23470 1445 aa24.13■■□□□ 1.45
RMDN3-207ENST00000558777 PZPP20742 1482 aa24.12■■□□□ 1.45
RMDN3-207ENST00000558777 ANKRD30AQ9BXX3 1397 aa24.11■■□□□ 1.45
RMDN3-207ENST00000558777 CDC42BPAQ5VT25 1732 aa24.09■■□□□ 1.45
RMDN3-207ENST00000558777 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
RMDN3-207ENST00000558777 TEX14Q8IWB6 1497 aa24.08■■□□□ 1.45
RMDN3-207ENST00000558777 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
RMDN3-207ENST00000558777 EIF4G2P78344 907 aaKnown RBP eCLIP24.06■■□□□ 1.44
RMDN3-207ENST00000558777 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
RMDN3-207ENST00000558777 CHD1O14646 1710 aa24.02■■□□□ 1.44
RMDN3-207ENST00000558777 WASHC2AQ641Q2 1341 aa24.02■■□□□ 1.44
RMDN3-207ENST00000558777 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
RMDN3-207ENST00000558777 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
RMDN3-207ENST00000558777 NBPF8Q3BBV2 869 aa24■■□□□ 1.43
RMDN3-207ENST00000558777 SHROOM2Q13796 1616 aa24■■□□□ 1.43
RMDN3-207ENST00000558777 ARHGEF5Q12774 1597 aa23.97■■□□□ 1.43
RMDN3-207ENST00000558777 TSPY4P0CV99 314 aa23.96■■□□□ 1.43
RMDN3-207ENST00000558777 TSPY10P0CW01 314 aa23.96■■□□□ 1.43
RMDN3-207ENST00000558777 MBD5Q9P267 1494 aa23.96■■□□□ 1.43
RMDN3-207ENST00000558777 SUPT16HQ9Y5B9 1047 aaKnown RBP23.95■■□□□ 1.42
RMDN3-207ENST00000558777 PKD2Q13563 968 aa23.94■■□□□ 1.42
RMDN3-207ENST00000558777 HNRNPMP52272 730 aaKnown RBP eCLIP23.92■■□□□ 1.428e-6■■■■□ 19.5
RMDN3-207ENST00000558777 SPATA31E1Q6ZUB1 1445 aa23.91■■□□□ 1.42
RMDN3-207ENST00000558777 KDM5DQ9BY66 1539 aa23.91■■□□□ 1.42
RMDN3-207ENST00000558777 PREX2Q70Z35 1606 aa23.9■■□□□ 1.42
RMDN3-207ENST00000558777 NUP155O75694 1391 aa23.9■■□□□ 1.42
RMDN3-207ENST00000558777 SAMD9LQ8IVG5 1584 aa23.89■■□□□ 1.42
RMDN3-207ENST00000558777 KIF15Q9NS87 1388 aa23.89■■□□□ 1.41
RMDN3-207ENST00000558777 RSPH4AQ5TD94 716 aa23.89■■□□□ 1.41
RMDN3-207ENST00000558777 CCDC7Q96M83 1385 aa23.88■■□□□ 1.41
RMDN3-207ENST00000558777 C11orf95C9JLR9 678 aaPredicted RBP23.88■■□□□ 1.41
RMDN3-207ENST00000558777 CCDC141Q6ZP82 1450 aa23.88■■□□□ 1.41
RMDN3-207ENST00000558777 CDC42BPBQ9Y5S2 1711 aa23.88■■□□□ 1.41
RMDN3-207ENST00000558777 CNTLNQ9NXG0 1405 aa23.87■■□□□ 1.41
RMDN3-207ENST00000558777 ABCC2Q92887 1545 aa23.86■■□□□ 1.41
RMDN3-207ENST00000558777 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
RMDN3-207ENST00000558777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.82■■□□□ 1.4
RMDN3-207ENST00000558777 TTC37Q6PGP7 1564 aa23.81■■□□□ 1.4
RMDN3-207ENST00000558777 UHRF1BP1Q6BDS2 1440 aa23.78■■□□□ 1.4
RMDN3-207ENST00000558777 KIF7Q2M1P5 1343 aa23.78■■□□□ 1.4
RMDN3-207ENST00000558777 ARHGAP5Q13017 1502 aa23.77■■□□□ 1.4
RMDN3-207ENST00000558777 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
RMDN3-207ENST00000558777 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
RMDN3-207ENST00000558777 SYCP2Q9BX26 1530 aa23.77■■□□□ 1.4
RMDN3-207ENST00000558777 ARHGEF12Q9NZN5 1544 aa23.75■■□□□ 1.39
RMDN3-207ENST00000558777 PLEKHH2Q8IVE3 1493 aa23.74■■□□□ 1.39
RMDN3-207ENST00000558777 POLR1AO95602 1720 aaPredicted RBP23.74■■□□□ 1.39
RMDN3-207ENST00000558777 UHRF1BP1LA0JNW5 1464 aa23.73■■□□□ 1.39
RMDN3-207ENST00000558777 USP47Q96K76 1375 aa23.72■■□□□ 1.39
RMDN3-207ENST00000558777 FAM135AQ9P2D6 1515 aa23.72■■□□□ 1.39
RMDN3-207ENST00000558777 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
RMDN3-207ENST00000558777 RALGAPBQ86X10 1494 aa23.7■■□□□ 1.38
RMDN3-207ENST00000558777 MYO5CQ9NQX4 1742 aa23.7■■□□□ 1.38
RMDN3-207ENST00000558777 ZNF326Q5BKZ1 582 aaKnown RBP23.69■■□□□ 1.38
RMDN3-207ENST00000558777 PLCH2O75038 1416 aa23.67■■□□□ 1.38
RMDN3-207ENST00000558777 KDM5CP41229 1560 aa23.67■■□□□ 1.38
RMDN3-207ENST00000558777 PLXNC1O60486 1568 aa23.66■■□□□ 1.38
RMDN3-207ENST00000558777 ZCCHC11Q5TAX3 1644 aaKnown RBP23.66■■□□□ 1.38
RMDN3-207ENST00000558777 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
RMDN3-207ENST00000558777 UNC13BO14795 1591 aa23.65■■□□□ 1.38
RMDN3-207ENST00000558777 HNRNPUQ00839 825 aaKnown RBP eCLIP23.63■■□□□ 1.37
RMDN3-207ENST00000558777 FKBP8Q14318 412 aa23.63■■□□□ 1.37
RMDN3-207ENST00000558777 CCDC184Q52MB2 194 aa23.63■■□□□ 1.37
RMDN3-207ENST00000558777 BCORL1Q5H9F3 1711 aa23.62■■□□□ 1.37
RMDN3-207ENST00000558777 EFCAB2Q5VUJ9 269 aa23.6■■□□□ 1.37
RMDN3-207ENST00000558777 DUOX2Q9NRD8 1548 aa23.6■■□□□ 1.37
RMDN3-207ENST00000558777 DCAF11Q8TEB1 546 aa23.59■■□□□ 1.37
RMDN3-207ENST00000558777 CARD11Q9BXL7 1154 aa23.59■■□□□ 1.37
RMDN3-207ENST00000558777 DHX29Q7Z478 1369 aaKnown RBP23.58■■□□□ 1.37
RMDN3-207ENST00000558777 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.37
RMDN3-207ENST00000558777 NEFLP07196 543 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms