RNA–Protein interactions for RNA: ENST00000558429.1

AC009269.3-201, humanhuman

TSL 5 BASIC

Gene AC009269.3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009269.3-201ENST00000558429 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
AC009269.3-201ENST00000558429 SPNS2Q8IVW8 549 aa10.96□□□□□ -0.65
AC009269.3-201ENST00000558429 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
AC009269.3-201ENST00000558429 PPP1R37O75864 691 aa10.93□□□□□ -0.66
AC009269.3-201ENST00000558429 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
AC009269.3-201ENST00000558429 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
AC009269.3-201ENST00000558429 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
AC009269.3-201ENST00000558429 C2orf72A6NCS6 295 aa10.88□□□□□ -0.67
AC009269.3-201ENST00000558429 DNAJC5Q9H3Z4 198 aa10.88□□□□□ -0.67
AC009269.3-201ENST00000558429 KIF3CO14782 793 aa10.87□□□□□ -0.67
AC009269.3-201ENST00000558429 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
AC009269.3-201ENST00000558429 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
AC009269.3-201ENST00000558429 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
AC009269.3-201ENST00000558429 ZSWIM6Q9HCJ5 1215 aa10.86□□□□□ -0.67
AC009269.3-201ENST00000558429 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
AC009269.3-201ENST00000558429 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
AC009269.3-201ENST00000558429 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
AC009269.3-201ENST00000558429 ERBB3P21860 1342 aa10.82□□□□□ -0.68
AC009269.3-201ENST00000558429 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
AC009269.3-201ENST00000558429 ARSIQ5FYB1 569 aa10.79□□□□□ -0.68
AC009269.3-201ENST00000558429 VARS2Q5ST30 1063 aaKnown RBP10.76□□□□□ -0.69
AC009269.3-201ENST00000558429 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
AC009269.3-201ENST00000558429 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
AC009269.3-201ENST00000558429 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
AC009269.3-201ENST00000558429 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
AC009269.3-201ENST00000558429 SLC34A2O95436 690 aa10.72□□□□□ -0.69
AC009269.3-201ENST00000558429 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
AC009269.3-201ENST00000558429 FOXK1P85037 733 aa10.71□□□□□ -0.69
AC009269.3-201ENST00000558429 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
AC009269.3-201ENST00000558429 PCDHGA4Q9Y5G9 962 aa10.71□□□□□ -0.69
AC009269.3-201ENST00000558429 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
AC009269.3-201ENST00000558429 NUDT7P0C024 238 aa10.69□□□□□ -0.7
AC009269.3-201ENST00000558429 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
AC009269.3-201ENST00000558429 DSG2Q14126 1118 aa10.68□□□□□ -0.7
AC009269.3-201ENST00000558429 ZNF687Q8N1G0 1237 aa10.66□□□□□ -0.7
AC009269.3-201ENST00000558429 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
AC009269.3-201ENST00000558429 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
AC009269.3-201ENST00000558429 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
AC009269.3-201ENST00000558429 LHX6Q9UPM6 363 aa10.62□□□□□ -0.71
AC009269.3-201ENST00000558429 NCKAP5LQ9HCH0 1330 aa10.6□□□□□ -0.71
AC009269.3-201ENST00000558429 PDE4AP27815 886 aa10.6□□□□□ -0.71
AC009269.3-201ENST00000558429 PPP1R15BQ5SWA1 713 aa10.6□□□□□ -0.71
AC009269.3-201ENST00000558429 TBC1D12O60347 775 aa10.58□□□□□ -0.72
AC009269.3-201ENST00000558429 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
AC009269.3-201ENST00000558429 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
AC009269.3-201ENST00000558429 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
AC009269.3-201ENST00000558429 KDM4FA0A1W2PPD8 638 aa10.55□□□□□ -0.72
AC009269.3-201ENST00000558429 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
AC009269.3-201ENST00000558429 DDX27Q96GQ7 796 aaKnown RBP10.54□□□□□ -0.72
AC009269.3-201ENST00000558429 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
AC009269.3-201ENST00000558429 PBX2P40425 430 aa10.52□□□□□ -0.73
AC009269.3-201ENST00000558429 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
AC009269.3-201ENST00000558429 MFSD10Q14728 455 aa10.51□□□□□ -0.73
AC009269.3-201ENST00000558429 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
AC009269.3-201ENST00000558429 ANKRD13DQ6ZTN6 518 aa10.5□□□□□ -0.73
AC009269.3-201ENST00000558429 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
AC009269.3-201ENST00000558429 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
AC009269.3-201ENST00000558429 POTEEQ6S8J3 1075 aa10.48□□□□□ -0.73
AC009269.3-201ENST00000558429 PPP4R3BQ5MIZ7 849 aa10.47□□□□□ -0.73
AC009269.3-201ENST00000558429 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
AC009269.3-201ENST00000558429 MYT1LQ9UL68 1186 aa10.45□□□□□ -0.74
AC009269.3-201ENST00000558429 ARHGAP33O14559 1287 aa10.44□□□□□ -0.74
AC009269.3-201ENST00000558429 PTGER2P43116 358 aa10.44□□□□□ -0.74
AC009269.3-201ENST00000558429 RNF166Q96A37 237 aaPredicted RBP10.44□□□□□ -0.74
AC009269.3-201ENST00000558429 EVI5O60447 810 aa10.42□□□□□ -0.74
AC009269.3-201ENST00000558429 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
AC009269.3-201ENST00000558429 EMILIN3Q9NT22 766 aa10.42□□□□□ -0.74
AC009269.3-201ENST00000558429 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
AC009269.3-201ENST00000558429 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
AC009269.3-201ENST00000558429 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
AC009269.3-201ENST00000558429 PSEN2P49810 448 aa10.4□□□□□ -0.74
AC009269.3-201ENST00000558429 KCNH8Q96L42 1107 aa10.38□□□□□ -0.75
AC009269.3-201ENST00000558429 KCNK17Q96T54 332 aa10.38□□□□□ -0.75
AC009269.3-201ENST00000558429 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
AC009269.3-201ENST00000558429 FOSBP53539 338 aa10.37□□□□□ -0.75
AC009269.3-201ENST00000558429 DMRTA1Q5VZB9 504 aa10.37□□□□□ -0.75
AC009269.3-201ENST00000558429 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
AC009269.3-201ENST00000558429 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
AC009269.3-201ENST00000558429 CAMK2BQ13554 666 aa10.35□□□□□ -0.75
AC009269.3-201ENST00000558429 TK2O00142 265 aa10.34□□□□□ -0.75
AC009269.3-201ENST00000558429 BCL2L12Q9HB09 334 aa10.34□□□□□ -0.75
AC009269.3-201ENST00000558429 DPYSL4O14531 572 aa10.31□□□□□ -0.76
AC009269.3-201ENST00000558429 ZDHHC16Q969W1 377 aa10.31□□□□□ -0.76
AC009269.3-201ENST00000558429 PTPREP23469 700 aa10.3□□□□□ -0.76
AC009269.3-201ENST00000558429 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
AC009269.3-201ENST00000558429 HRO43593 1189 aa10.28□□□□□ -0.76
AC009269.3-201ENST00000558429 PCDHGA10Q9Y5H3 936 aa10.27□□□□□ -0.77
AC009269.3-201ENST00000558429 VPS9D1Q9Y2B5 631 aa10.26□□□□□ -0.77
AC009269.3-201ENST00000558429 PHF14O94880 888 aa10.25□□□□□ -0.77
AC009269.3-201ENST00000558429 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
AC009269.3-201ENST00000558429 WDR70Q9NW82 654 aa10.25□□□□□ -0.77
AC009269.3-201ENST00000558429 TYW1BQ6NUM6 668 aa10.24□□□□□ -0.77
AC009269.3-201ENST00000558429 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
AC009269.3-201ENST00000558429 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
AC009269.3-201ENST00000558429 SLC4A5Q9BY07 1137 aa10.23□□□□□ -0.77
AC009269.3-201ENST00000558429 E2F4Q16254 413 aa10.22□□□□□ -0.77
AC009269.3-201ENST00000558429 EPAS1Q99814 870 aa10.21□□□□□ -0.77
AC009269.3-201ENST00000558429 PPP1R3GB7ZBB8 358 aa10.2□□□□□ -0.78
AC009269.3-201ENST00000558429 PDIA6Q15084 440 aa10.2□□□□□ -0.78
AC009269.3-201ENST00000558429 DDX12PQ92771 950 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms