RNA–Protein interactions for RNA: ENST00000557822.5

RORA-206, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-206ENST00000557822 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.81
RORA-206ENST00000557822 PTPRTO14522 1441 aa26.37■■□□□ 1.81
RORA-206ENST00000557822 NUP153P49790 1475 aaKnown RBP26.36■■□□□ 1.81
RORA-206ENST00000557822 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
RORA-206ENST00000557822 PLEKHD1A6NEE1 506 aa26.34■■□□□ 1.81
RORA-206ENST00000557822 SAMD9Q5K651 1589 aa26.33■■□□□ 1.81
RORA-206ENST00000557822 UHRF1BP1Q6BDS2 1440 aa26.33■■□□□ 1.81
RORA-206ENST00000557822 HECW1Q76N89 1606 aa26.32■■□□□ 1.8
RORA-206ENST00000557822 CEBPAP49715 358 aaPredicted RBP26.3■■□□□ 1.8
RORA-206ENST00000557822 ATP10AO60312 1499 aa26.3■■□□□ 1.8
RORA-206ENST00000557822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.8
RORA-206ENST00000557822 C9orf84Q5VXU9 1444 aa26.27■■□□□ 1.8
RORA-206ENST00000557822 LTBP4Q8N2S1 1624 aa26.27■■□□□ 1.8
RORA-206ENST00000557822 SETD1BQ9UPS6 1966 aaKnown RBP26.26■■□□□ 1.79
RORA-206ENST00000557822 SCAPERQ9BY12 1400 aa26.23■■□□□ 1.79
RORA-206ENST00000557822 PLCH2O75038 1416 aa26.17■■□□□ 1.78
RORA-206ENST00000557822 NCOA1Q15788 1441 aa26.11■■□□□ 1.77
RORA-206ENST00000557822 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.77
RORA-206ENST00000557822 EFCAB2Q5VUJ9 269 aa26.07■■□□□ 1.76
RORA-206ENST00000557822 ZNF518AQ6AHZ1 1483 aa26.05■■□□□ 1.76
RORA-206ENST00000557822 UBAP1LF5GYI3 381 aa26.05■■□□□ 1.76
RORA-206ENST00000557822 C3P01024 1663 aa26.04■■□□□ 1.76
RORA-206ENST00000557822 REREQ9P2R6 1566 aa26.03■■□□□ 1.76
RORA-206ENST00000557822 KDM5CP41229 1560 aa26■■□□□ 1.75
RORA-206ENST00000557822 ESF1Q9H501 851 aaKnown RBP25.99■■□□□ 1.75
RORA-206ENST00000557822 AGLP35573 1532 aa25.97■■□□□ 1.75
RORA-206ENST00000557822 DIP2CQ9Y2E4 1556 aa25.96■■□□□ 1.75
RORA-206ENST00000557822 AFAP1Q8N556 730 aa25.96■■□□□ 1.75
RORA-206ENST00000557822 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
RORA-206ENST00000557822 CNTLNQ9NXG0 1405 aa25.95■■□□□ 1.74
RORA-206ENST00000557822 CDK13Q14004 1512 aaKnown RBP25.94■■□□□ 1.74
RORA-206ENST00000557822 ZNF335Q9H4Z2 1342 aaPredicted RBP25.93■■□□□ 1.74
RORA-206ENST00000557822 CAMSAP1Q5T5Y3 1602 aa25.93■■□□□ 1.74
RORA-206ENST00000557822 MYO5CQ9NQX4 1742 aa25.93■■□□□ 1.74
RORA-206ENST00000557822 RANGAP1P46060 587 aaPredicted RBP25.92■■□□□ 1.74
RORA-206ENST00000557822 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
RORA-206ENST00000557822 NPATQ14207 1427 aa25.91■■□□□ 1.74
RORA-206ENST00000557822 MYT1LQ9UL68 1186 aa25.91■■□□□ 1.74
RORA-206ENST00000557822 MED1Q15648 1581 aaPredicted RBP25.9■■□□□ 1.74
RORA-206ENST00000557822 ABCA6Q8N139 1617 aa25.87■■□□□ 1.73
RORA-206ENST00000557822 PKD2Q13563 968 aa25.86■■□□□ 1.73
RORA-206ENST00000557822 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
RORA-206ENST00000557822 ARHGAP5Q13017 1502 aa25.84■■□□□ 1.73
RORA-206ENST00000557822 CDK11AQ9UQ88 783 aaPredicted RBP25.84■■□□□ 1.73
RORA-206ENST00000557822 PLA2R1Q13018 1463 aa25.84■■□□□ 1.73
RORA-206ENST00000557822 HSPA1LP34931 641 aa25.83■■□□□ 1.73
RORA-206ENST00000557822 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
RORA-206ENST00000557822 KIF14Q15058 1648 aa25.78■■□□□ 1.72
RORA-206ENST00000557822 MROH2AA6NES4 1674 aa25.78■■□□□ 1.72
RORA-206ENST00000557822 ZMYM3Q14202 1370 aa25.76■■□□□ 1.71
RORA-206ENST00000557822 TROQ12816 1431 aaPredicted RBP25.75■■□□□ 1.71
RORA-206ENST00000557822 TOM1O60784 492 aa25.75■■□□□ 1.71
RORA-206ENST00000557822 PHF23Q9BUL5 403 aaPredicted RBP25.73■■□□□ 1.71
RORA-206ENST00000557822 PPP6R1Q9UPN7 881 aa25.73■■□□□ 1.71
RORA-206ENST00000557822 SCAF1Q9H7N4 1312 aaKnown RBP25.72■■□□□ 1.71
RORA-206ENST00000557822 ZNF142P52746 1687 aaPredicted RBP25.72■■□□□ 1.71
RORA-206ENST00000557822 CLIP1P30622 1438 aa25.71■■□□□ 1.71
RORA-206ENST00000557822 PIP4K2BP78356 416 aa25.7■■□□□ 1.7
RORA-206ENST00000557822 EEA1Q15075 1411 aa25.7■■□□□ 1.7
RORA-206ENST00000557822 FMN1Q68DA7 1419 aa25.7■■□□□ 1.7
RORA-206ENST00000557822 ABCC1P33527 1531 aa25.69■■□□□ 1.7
RORA-206ENST00000557822 ATP1B4Q9UN42 357 aaPredicted RBP25.68■■□□□ 1.7
RORA-206ENST00000557822 KIDINS220Q9ULH0 1771 aa25.68■■□□□ 1.7
RORA-206ENST00000557822 CEP170BQ9Y4F5 1589 aaPredicted RBP25.68■■□□□ 1.7
RORA-206ENST00000557822 MYO3AQ8NEV4 1616 aa25.67■■□□□ 1.7
RORA-206ENST00000557822 CPS1P31327 1500 aa25.66■■□□□ 1.7
RORA-206ENST00000557822 CDC42BPBQ9Y5S2 1711 aa25.66■■□□□ 1.7
RORA-206ENST00000557822 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
RORA-206ENST00000557822 ITSN2Q9NZM3 1697 aa25.63■■□□□ 1.69
RORA-206ENST00000557822 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
RORA-206ENST00000557822 PREX2Q70Z35 1606 aa25.59■■□□□ 1.69
RORA-206ENST00000557822 SHANK2Q9UPX8 1470 aa25.57■■□□□ 1.68
RORA-206ENST00000557822 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
RORA-206ENST00000557822 A2ML1A8K2U0 1454 aa25.54■■□□□ 1.68
RORA-206ENST00000557822 SAMD9LQ8IVG5 1584 aa25.54■■□□□ 1.68
RORA-206ENST00000557822 SPAG9O60271 1321 aaKnown RBP25.51■■□□□ 1.67
RORA-206ENST00000557822 DNMT1P26358 1616 aaKnown RBP25.5■■□□□ 1.67
RORA-206ENST00000557822 PLXNC1O60486 1568 aa25.49■■□□□ 1.67
RORA-206ENST00000557822 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
RORA-206ENST00000557822 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
RORA-206ENST00000557822 NEURL4Q96JN8 1562 aa25.47■■□□□ 1.67
RORA-206ENST00000557822 A2MP01023 1474 aa25.46■■□□□ 1.67
RORA-206ENST00000557822 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.66
RORA-206ENST00000557822 GGT6Q6P531 493 aa25.44■■□□□ 1.66
RORA-206ENST00000557822 VWDEQ8N2E2 1590 aa25.43■■□□□ 1.66
RORA-206ENST00000557822 ATP7AQ04656 1500 aa25.42■■□□□ 1.66
RORA-206ENST00000557822 RGS17Q9UGC6 210 aaPredicted RBP25.42■■□□□ 1.66
RORA-206ENST00000557822 LRRIQ1Q96JM4 1722 aa25.42■■□□□ 1.66
RORA-206ENST00000557822 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
RORA-206ENST00000557822 ANKLE2Q86XL3 938 aa25.4■■□□□ 1.66
RORA-206ENST00000557822 SYCP2Q9BX26 1530 aa25.4■■□□□ 1.66
RORA-206ENST00000557822 KIAA1107Q9UPP5 1409 aa25.38■■□□□ 1.65
RORA-206ENST00000557822 CCDC18Q5T9S5 1454 aa25.38■■□□□ 1.65
RORA-206ENST00000557822 INO80Q9ULG1 1556 aaPredicted RBP25.38■■□□□ 1.65
RORA-206ENST00000557822 HNRNPMP52272 730 aaKnown RBP eCLIP25.37■■□□□ 1.65
RORA-206ENST00000557822 ZNF777Q9ULD5 760 aaPredicted RBP25.37■■□□□ 1.65
RORA-206ENST00000557822 MED14O60244 1454 aa25.35■■□□□ 1.65
RORA-206ENST00000557822 TNRQ92752 1358 aa25.35■■□□□ 1.65
RORA-206ENST00000557822 UBTFP17480 764 aaKnown RBP25.34■■□□□ 1.65
RORA-206ENST00000557822 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms