RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 POTEB3A0JP26 581 aa8.61□□□□□ -1.03
FOXN3-216ENST00000557496 POTEBQ6S5H4 581 aa8.61□□□□□ -1.03
FOXN3-216ENST00000557496 FAM205CA6NFA0 338 aa8.6□□□□□ -1.03
FOXN3-216ENST00000557496 RIMBP2O15034 1052 aa8.6□□□□□ -1.03
FOXN3-216ENST00000557496 HS6ST3Q8IZP7 471 aa8.59□□□□□ -1.03
FOXN3-216ENST00000557496 KIF3CO14782 793 aa8.58□□□□□ -1.04
FOXN3-216ENST00000557496 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
FOXN3-216ENST00000557496 PPP1R37O75864 691 aa8.55□□□□□ -1.04
FOXN3-216ENST00000557496 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
FOXN3-216ENST00000557496 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
FOXN3-216ENST00000557496 C2orf72A6NCS6 295 aa8.54□□□□□ -1.04
FOXN3-216ENST00000557496 GPR153Q6NV75 609 aa8.54□□□□□ -1.04
FOXN3-216ENST00000557496 SPNS2Q8IVW8 549 aa8.53□□□□□ -1.04
FOXN3-216ENST00000557496 CHGAP10645 457 aaKnown RBP8.52□□□□□ -1.05
FOXN3-216ENST00000557496 ERBB3P21860 1342 aa8.52□□□□□ -1.05
FOXN3-216ENST00000557496 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
FOXN3-216ENST00000557496 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
FOXN3-216ENST00000557496 ARSIQ5FYB1 569 aa8.49□□□□□ -1.05
FOXN3-216ENST00000557496 VARS2Q5ST30 1063 aaKnown RBP8.49□□□□□ -1.05
FOXN3-216ENST00000557496 NKX1-1Q15270 411 aaPredicted RBP8.48□□□□□ -1.05
FOXN3-216ENST00000557496 TMC2Q8TDI7 906 aa8.48□□□□□ -1.05
FOXN3-216ENST00000557496 KHSRPQ92945 711 aaKnown RBP eCLIP8.47□□□□□ -1.05
FOXN3-216ENST00000557496 SLC34A2O95436 690 aa8.46□□□□□ -1.06
FOXN3-216ENST00000557496 ZNF687Q8N1G0 1237 aa8.43□□□□□ -1.06
FOXN3-216ENST00000557496 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-216ENST00000557496 NUDT7P0C024 238 aa8.41□□□□□ -1.06
FOXN3-216ENST00000557496 FOXK1P85037 733 aa8.41□□□□□ -1.06
FOXN3-216ENST00000557496 RYDENQ9NUL5 291 aaKnown RBP8.41□□□□□ -1.06
FOXN3-216ENST00000557496 PCDHGA4Q9Y5G9 962 aa8.41□□□□□ -1.06
FOXN3-216ENST00000557496 GPHNQ9NQX3 736 aaPredicted RBP8.4□□□□□ -1.06
FOXN3-216ENST00000557496 DSG2Q14126 1118 aa8.37□□□□□ -1.07
FOXN3-216ENST00000557496 PLPP6Q8IY26 295 aa8.37□□□□□ -1.07
FOXN3-216ENST00000557496 PTCD2Q8WV60 388 aaKnown RBP8.37□□□□□ -1.07
FOXN3-216ENST00000557496 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
FOXN3-216ENST00000557496 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
FOXN3-216ENST00000557496 GTPBP6O43824 516 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-216ENST00000557496 CRISPLD2Q9H0B8 497 aa8.34□□□□□ -1.07
FOXN3-216ENST00000557496 DCAF8L2P0C7V8 631 aa8.32□□□□□ -1.08
FOXN3-216ENST00000557496 PBX2P40425 430 aa8.31□□□□□ -1.08
FOXN3-216ENST00000557496 NCKAP5LQ9HCH0 1330 aa8.3□□□□□ -1.08
FOXN3-216ENST00000557496 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
FOXN3-216ENST00000557496 POTEEQ6S8J3 1075 aa8.3□□□□□ -1.08
FOXN3-216ENST00000557496 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
FOXN3-216ENST00000557496 RNF166Q96A37 237 aaPredicted RBP8.29□□□□□ -1.08
FOXN3-216ENST00000557496 PTGER2P43116 358 aa8.28□□□□□ -1.08
FOXN3-216ENST00000557496 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
FOXN3-216ENST00000557496 ANKRD13DQ6ZTN6 518 aa8.28□□□□□ -1.08
FOXN3-216ENST00000557496 MYT1LQ9UL68 1186 aa8.28□□□□□ -1.08
FOXN3-216ENST00000557496 TBC1D12O60347 775 aa8.27□□□□□ -1.09
FOXN3-216ENST00000557496 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
FOXN3-216ENST00000557496 PDE4AP27815 886 aa8.26□□□□□ -1.09
FOXN3-216ENST00000557496 AXIN2Q9Y2T1 843 aa8.26□□□□□ -1.09
FOXN3-216ENST00000557496 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
FOXN3-216ENST00000557496 ARHGAP33O14559 1287 aa8.23□□□□□ -1.09
FOXN3-216ENST00000557496 MFSD10Q14728 455 aa8.22□□□□□ -1.09
FOXN3-216ENST00000557496 PPP4R3BQ5MIZ7 849 aa8.22□□□□□ -1.09
FOXN3-216ENST00000557496 DDX27Q96GQ7 796 aaKnown RBP8.22□□□□□ -1.09
FOXN3-216ENST00000557496 LARP6Q9BRS8 491 aaKnown RBP8.21□□□□□ -1.1
FOXN3-216ENST00000557496 PSEN2P49810 448 aa8.19□□□□□ -1.1
FOXN3-216ENST00000557496 ADGRD1Q6QNK2 874 aa8.19□□□□□ -1.1
FOXN3-216ENST00000557496 CADPS2Q86UW7 1296 aa8.19□□□□□ -1.1
FOXN3-216ENST00000557496 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
FOXN3-216ENST00000557496 AMER1Q5JTC6 1135 aaPredicted RBP8.17□□□□□ -1.1
FOXN3-216ENST00000557496 TK2O00142 265 aa8.16□□□□□ -1.1
FOXN3-216ENST00000557496 ZNF454Q8N9F8 522 aa8.16□□□□□ -1.1
FOXN3-216ENST00000557496 BBXQ8WY36 941 aaPredicted RBP8.16□□□□□ -1.1
FOXN3-216ENST00000557496 ANO8Q9HCE9 1232 aaPredicted RBP8.16□□□□□ -1.1
FOXN3-216ENST00000557496 EVI5O60447 810 aa8.15□□□□□ -1.1
FOXN3-216ENST00000557496 FOSBP53539 338 aa8.15□□□□□ -1.1
FOXN3-216ENST00000557496 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
FOXN3-216ENST00000557496 HRO43593 1189 aa8.14□□□□□ -1.11
FOXN3-216ENST00000557496 JPH4Q96JJ6 628 aa8.14□□□□□ -1.11
FOXN3-216ENST00000557496 KCNK17Q96T54 332 aa8.14□□□□□ -1.11
FOXN3-216ENST00000557496 BCL2L12Q9HB09 334 aa8.13□□□□□ -1.11
FOXN3-216ENST00000557496 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
FOXN3-216ENST00000557496 KCNH8Q96L42 1107 aa8.12□□□□□ -1.11
FOXN3-216ENST00000557496 MAP3K9P80192 1104 aa8.11□□□□□ -1.11
FOXN3-216ENST00000557496 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
FOXN3-216ENST00000557496 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.11
FOXN3-216ENST00000557496 PTPREP23469 700 aa8.08□□□□□ -1.12
FOXN3-216ENST00000557496 ZDHHC16Q969W1 377 aa8.08□□□□□ -1.12
FOXN3-216ENST00000557496 SLC4A5Q9BY07 1137 aa8.07□□□□□ -1.12
FOXN3-216ENST00000557496 ADAM33Q9BZ11 813 aa8.07□□□□□ -1.12
FOXN3-216ENST00000557496 SPRYD3Q8NCJ5 442 aa8.06□□□□□ -1.12
FOXN3-216ENST00000557496 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
FOXN3-216ENST00000557496 ZBED2Q9BTP6 218 aa8.05□□□□□ -1.12
FOXN3-216ENST00000557496 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.05□□□□□ -1.12
FOXN3-216ENST00000557496 HCSTQ9UBK5 93 aa8.05□□□□□ -1.12
FOXN3-216ENST00000557496 BHMG1C9JSJ3 638 aaPredicted RBP8.03□□□□□ -1.12
FOXN3-216ENST00000557496 DPYSL4O14531 572 aa8.03□□□□□ -1.12
FOXN3-216ENST00000557496 PHF14O94880 888 aa8.02□□□□□ -1.13
FOXN3-216ENST00000557496 KCTD12Q96CX2 325 aaKnown RBP8.02□□□□□ -1.13
FOXN3-216ENST00000557496 STAC3Q96MF2 364 aa8.02□□□□□ -1.13
FOXN3-216ENST00000557496 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
FOXN3-216ENST00000557496 TYW1BQ6NUM6 668 aa8.01□□□□□ -1.13
FOXN3-216ENST00000557496 FBXW7Q969H0 707 aa8.01□□□□□ -1.13
FOXN3-216ENST00000557496 PAXIP1Q6ZW49 1069 aaPredicted RBP7.99□□□□□ -1.13
FOXN3-216ENST00000557496 COL9A1P20849 921 aa7.98□□□□□ -1.13
FOXN3-216ENST00000557496 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
FOXN3-216ENST00000557496 PDIA6Q15084 440 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms