RNA–Protein interactions for RNA: ENST00000557150.5

APEX1-215, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-215ENST00000557150 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.12■□□□□ 0.49
APEX1-215ENST00000557150 ABCC5O15440 1437 aa18.1■□□□□ 0.49
APEX1-215ENST00000557150 NAIPQ13075 1403 aa18.09■□□□□ 0.49
APEX1-215ENST00000557150 ROCK1Q13464 1354 aa18.09■□□□□ 0.49
APEX1-215ENST00000557150 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
APEX1-215ENST00000557150 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
APEX1-215ENST00000557150 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.49
APEX1-215ENST00000557150 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.48
APEX1-215ENST00000557150 MYO5CQ9NQX4 1742 aa18.07■□□□□ 0.48
APEX1-215ENST00000557150 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
APEX1-215ENST00000557150 ZNF777Q9ULD5 760 aaPredicted RBP18.05■□□□□ 0.48
APEX1-215ENST00000557150 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
APEX1-215ENST00000557150 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
APEX1-215ENST00000557150 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
APEX1-215ENST00000557150 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
APEX1-215ENST00000557150 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
APEX1-215ENST00000557150 ACIN1Q9UKV3 1341 aaKnown RBP18.03■□□□□ 0.48
APEX1-215ENST00000557150 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
APEX1-215ENST00000557150 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
APEX1-215ENST00000557150 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
APEX1-215ENST00000557150 ADGRL2O95490 1459 aa18.02■□□□□ 0.48
APEX1-215ENST00000557150 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.48
APEX1-215ENST00000557150 PLCH2O75038 1416 aa18.02■□□□□ 0.48
APEX1-215ENST00000557150 SAMD9LQ8IVG5 1584 aa18.02■□□□□ 0.48
APEX1-215ENST00000557150 CHIC2Q9UKJ5 165 aa18.02■□□□□ 0.48
APEX1-215ENST00000557150 ARHGAP5Q13017 1502 aa18.02■□□□□ 0.47
APEX1-215ENST00000557150 ARAP3Q8WWN8 1544 aa18.02■□□□□ 0.47
APEX1-215ENST00000557150 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
APEX1-215ENST00000557150 ASXL2Q76L83 1435 aa18.01■□□□□ 0.47
APEX1-215ENST00000557150 RSPH4AQ5TD94 716 aa18.01■□□□□ 0.47
APEX1-215ENST00000557150 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
APEX1-215ENST00000557150 ABCA9Q8IUA7 1624 aa17.99■□□□□ 0.47
APEX1-215ENST00000557150 RRP7BPQ9NSQ0 103 aa17.99■□□□□ 0.47
APEX1-215ENST00000557150 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
APEX1-215ENST00000557150 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
APEX1-215ENST00000557150 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
APEX1-215ENST00000557150 EFCAB2Q5VUJ9 269 aa17.96■□□□□ 0.47
APEX1-215ENST00000557150 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
APEX1-215ENST00000557150 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
APEX1-215ENST00000557150 ANKRD30AQ9BXX3 1397 aa17.95■□□□□ 0.46
APEX1-215ENST00000557150 TSPY4P0CV99 314 aa17.94■□□□□ 0.46
APEX1-215ENST00000557150 TSPY10P0CW01 314 aa17.94■□□□□ 0.46
APEX1-215ENST00000557150 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
APEX1-215ENST00000557150 MAST1Q9Y2H9 1570 aa17.93■□□□□ 0.46
APEX1-215ENST00000557150 TRHP20396 242 aaPredicted RBP17.93■□□□□ 0.46
APEX1-215ENST00000557150 HNRNPMP52272 730 aaKnown RBP eCLIP17.93■□□□□ 0.46
APEX1-215ENST00000557150 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
APEX1-215ENST00000557150 KDM6BO15054 1643 aa17.92■□□□□ 0.46
APEX1-215ENST00000557150 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
APEX1-215ENST00000557150 ABCC1P33527 1531 aa17.91■□□□□ 0.46
APEX1-215ENST00000557150 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
APEX1-215ENST00000557150 FANCAO15360 1455 aa17.85■□□□□ 0.45
APEX1-215ENST00000557150 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
APEX1-215ENST00000557150 ANKRD50Q9ULJ7 1429 aa17.84■□□□□ 0.45
APEX1-215ENST00000557150 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
APEX1-215ENST00000557150 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.44
APEX1-215ENST00000557150 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
APEX1-215ENST00000557150 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
APEX1-215ENST00000557150 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
APEX1-215ENST00000557150 RTEL1-TNFRSF6BF6WH68 1400 aa17.8■□□□□ 0.44
APEX1-215ENST00000557150 TRAPPC8Q9Y2L5 1435 aa17.8■□□□□ 0.44
APEX1-215ENST00000557150 GLI2P10070 1586 aa17.79■□□□□ 0.44
APEX1-215ENST00000557150 MPHOSPH9Q99550 1183 aa17.79■□□□□ 0.44
APEX1-215ENST00000557150 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
APEX1-215ENST00000557150 ADGRL1O94910 1474 aa17.78■□□□□ 0.44
APEX1-215ENST00000557150 KDM5DQ9BY66 1539 aa17.77■□□□□ 0.43
APEX1-215ENST00000557150 DUOX2Q9NRD8 1548 aa17.76■□□□□ 0.43
APEX1-215ENST00000557150 PZPP20742 1482 aa17.75■□□□□ 0.43
APEX1-215ENST00000557150 SCAPERQ9BY12 1400 aa17.75■□□□□ 0.43
APEX1-215ENST00000557150 SIN3AQ96ST3 1273 aa17.74■□□□□ 0.43
APEX1-215ENST00000557150 NEO1Q92859 1461 aa17.74■□□□□ 0.43
APEX1-215ENST00000557150 SPAG9O60271 1321 aaKnown RBP17.73■□□□□ 0.43
APEX1-215ENST00000557150 MAP3K4Q9Y6R4 1608 aa17.73■□□□□ 0.43
APEX1-215ENST00000557150 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
APEX1-215ENST00000557150 ZFYVE16Q7Z3T8 1539 aa17.72■□□□□ 0.43
APEX1-215ENST00000557150 INO80Q9ULG1 1556 aaPredicted RBP17.72■□□□□ 0.43
APEX1-215ENST00000557150 NEUROD1Q13562 356 aa17.71■□□□□ 0.43
APEX1-215ENST00000557150 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
APEX1-215ENST00000557150 UNC13BO14795 1591 aa17.7■□□□□ 0.42
APEX1-215ENST00000557150 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
APEX1-215ENST00000557150 ATP7AQ04656 1500 aa17.7■□□□□ 0.42
APEX1-215ENST00000557150 DIP2BQ9P265 1576 aa17.7■□□□□ 0.42
APEX1-215ENST00000557150 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
APEX1-215ENST00000557150 NUP155O75694 1391 aa17.68■□□□□ 0.42
APEX1-215ENST00000557150 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
APEX1-215ENST00000557150 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
APEX1-215ENST00000557150 POGZQ7Z3K3 1410 aa17.66■□□□□ 0.42
APEX1-215ENST00000557150 KDM5CP41229 1560 aa17.66■□□□□ 0.42
APEX1-215ENST00000557150 MAGI2Q86UL8 1455 aa17.65■□□□□ 0.42
APEX1-215ENST00000557150 ZNF316A6NFI3 1004 aaPredicted RBP17.63■□□□□ 0.41
APEX1-215ENST00000557150 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
APEX1-215ENST00000557150 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
APEX1-215ENST00000557150 IQGAP3Q86VI3 1631 aa17.62■□□□□ 0.41
APEX1-215ENST00000557150 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
APEX1-215ENST00000557150 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
APEX1-215ENST00000557150 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
APEX1-215ENST00000557150 PKD2Q13563 968 aa17.62■□□□□ 0.41
APEX1-215ENST00000557150 RPRD2Q5VT52 1461 aaKnown RBP17.62■□□□□ 0.41
APEX1-215ENST00000557150 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
APEX1-215ENST00000557150 FOXD1Q16676 465 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms