RNA–Protein interactions for RNA: ENST00000557123.5

CALM1-215, Transcript of calmodulin 1, humanhuman

TSL 3

Gene CALM1, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-215ENST00000557123 SOCS7O14512 581 aa29.08■■■□□ 2.25
CALM1-215ENST00000557123 RANGAP1P46060 587 aaPredicted RBP29.07■■■□□ 2.24
CALM1-215ENST00000557123 ARHGEF12Q9NZN5 1544 aa29.06■■■□□ 2.24
CALM1-215ENST00000557123 ILDR2Q71H61 639 aa29.06■■■□□ 2.24
CALM1-215ENST00000557123 SCAPERQ9BY12 1400 aa29.05■■■□□ 2.24
CALM1-215ENST00000557123 DMRT2Q9Y5R5 561 aa29.04■■■□□ 2.24
CALM1-215ENST00000557123 ATP10AO60312 1499 aa29.03■■■□□ 2.24
CALM1-215ENST00000557123 C9orf84Q5VXU9 1444 aa29.02■■■□□ 2.24
CALM1-215ENST00000557123 PLCH2O75038 1416 aa28.99■■■□□ 2.23
CALM1-215ENST00000557123 SETD1BQ9UPS6 1966 aaKnown RBP28.99■■■□□ 2.23
CALM1-215ENST00000557123 STRCQ7RTU9 1775 aa28.98■■■□□ 2.23
CALM1-215ENST00000557123 UHRF1BP1Q6BDS2 1440 aa28.95■■■□□ 2.23
CALM1-215ENST00000557123 CEBPAP49715 358 aaPredicted RBP28.95■■■□□ 2.22
CALM1-215ENST00000557123 CDK13Q14004 1512 aaKnown RBP28.94■■■□□ 2.22
CALM1-215ENST00000557123 SPATA31D1Q6ZQQ2 1576 aa28.92■■■□□ 2.22
CALM1-215ENST00000557123 EFCAB2Q5VUJ9 269 aa28.9■■■□□ 2.22
CALM1-215ENST00000557123 MYO5CQ9NQX4 1742 aa28.89■■■□□ 2.22
CALM1-215ENST00000557123 EEA1Q15075 1411 aa28.89■■■□□ 2.22
CALM1-215ENST00000557123 ZNF518AQ6AHZ1 1483 aa28.86■■■□□ 2.21
CALM1-215ENST00000557123 PTPRTO14522 1441 aa28.86■■■□□ 2.21
CALM1-215ENST00000557123 KDM5CP41229 1560 aa28.8■■■□□ 2.2
CALM1-215ENST00000557123 MYT1LQ9UL68 1186 aa28.78■■■□□ 2.2
CALM1-215ENST00000557123 CDK11AQ9UQ88 783 aaPredicted RBP28.77■■■□□ 2.2
CALM1-215ENST00000557123 REREQ9P2R6 1566 aa28.76■■■□□ 2.19
CALM1-215ENST00000557123 AFAP1Q8N556 730 aa28.76■■■□□ 2.19
CALM1-215ENST00000557123 IQSEC2Q5JU85 1478 aa28.76■■■□□ 2.19
CALM1-215ENST00000557123 C3P01024 1663 aa28.76■■■□□ 2.19
CALM1-215ENST00000557123 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
CALM1-215ENST00000557123 ARHGAP5Q13017 1502 aa28.75■■■□□ 2.19
CALM1-215ENST00000557123 KIF14Q15058 1648 aa28.75■■■□□ 2.19
CALM1-215ENST00000557123 ATP1B4Q9UN42 357 aaPredicted RBP28.74■■■□□ 2.19
CALM1-215ENST00000557123 LTBP4Q8N2S1 1624 aa28.73■■■□□ 2.19
CALM1-215ENST00000557123 ESF1Q9H501 851 aaKnown RBP28.72■■■□□ 2.19
CALM1-215ENST00000557123 FMN1Q68DA7 1419 aa28.71■■■□□ 2.19
CALM1-215ENST00000557123 TRAPPC8Q9Y2L5 1435 aa28.7■■■□□ 2.19
CALM1-215ENST00000557123 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
CALM1-215ENST00000557123 AGLP35573 1532 aa28.68■■■□□ 2.18
CALM1-215ENST00000557123 TROQ12816 1431 aaPredicted RBP28.68■■■□□ 2.18
CALM1-215ENST00000557123 MLH3Q9UHC1 1453 aa28.67■■■□□ 2.18
CALM1-215ENST00000557123 CLIP1P30622 1438 aa28.67■■■□□ 2.18
CALM1-215ENST00000557123 NCOA1Q15788 1441 aa28.67■■■□□ 2.18
CALM1-215ENST00000557123 CNTLNQ9NXG0 1405 aa28.63■■■□□ 2.17
CALM1-215ENST00000557123 CDC42BPBQ9Y5S2 1711 aa28.59■■■□□ 2.17
CALM1-215ENST00000557123 CAMSAP1Q5T5Y3 1602 aa28.55■■■□□ 2.16
CALM1-215ENST00000557123 ABCC1P33527 1531 aa28.55■■■□□ 2.16
CALM1-215ENST00000557123 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
CALM1-215ENST00000557123 NPATQ14207 1427 aa28.54■■■□□ 2.16
CALM1-215ENST00000557123 PREX2Q70Z35 1606 aa28.54■■■□□ 2.16
CALM1-215ENST00000557123 ITSN2Q9NZM3 1697 aa28.53■■■□□ 2.16
CALM1-215ENST00000557123 KIDINS220Q9ULH0 1771 aa28.52■■■□□ 2.16
CALM1-215ENST00000557123 MROH2AA6NES4 1674 aa28.51■■■□□ 2.16
CALM1-215ENST00000557123 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.15
CALM1-215ENST00000557123 UBAP1LF5GYI3 381 aa28.49■■■□□ 2.15
CALM1-215ENST00000557123 LRRIQ1Q96JM4 1722 aa28.49■■■□□ 2.15
CALM1-215ENST00000557123 ZNF335Q9H4Z2 1342 aaPredicted RBP28.46■■■□□ 2.15
CALM1-215ENST00000557123 NCKAP5LQ9HCH0 1330 aa28.44■■■□□ 2.14
CALM1-215ENST00000557123 ZMYM3Q14202 1370 aa28.44■■■□□ 2.14
CALM1-215ENST00000557123 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
CALM1-215ENST00000557123 PLA2R1Q13018 1463 aa28.41■■■□□ 2.14
CALM1-215ENST00000557123 PKD2Q13563 968 aa28.41■■■□□ 2.14
CALM1-215ENST00000557123 ZNF142P52746 1687 aaPredicted RBP28.4■■■□□ 2.14
CALM1-215ENST00000557123 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
CALM1-215ENST00000557123 SUPT6HQ7KZ85 1726 aaKnown RBP28.38■■■□□ 2.13
CALM1-215ENST00000557123 SAMD9LQ8IVG5 1584 aa28.38■■■□□ 2.13
CALM1-215ENST00000557123 CCDC18Q5T9S5 1454 aa28.38■■■□□ 2.13
CALM1-215ENST00000557123 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
CALM1-215ENST00000557123 TCOF1Q13428 1488 aaKnown RBP28.34■■■□□ 2.13
CALM1-215ENST00000557123 CEP170BQ9Y4F5 1589 aaPredicted RBP28.34■■■□□ 2.13
CALM1-215ENST00000557123 CLTCQ00610 1675 aaKnown RBP28.34■■■□□ 2.13
CALM1-215ENST00000557123 SPAG9O60271 1321 aaKnown RBP28.33■■■□□ 2.13
CALM1-215ENST00000557123 SYCP2Q9BX26 1530 aa28.3■■■□□ 2.12
CALM1-215ENST00000557123 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
CALM1-215ENST00000557123 ZNF777Q9ULD5 760 aaPredicted RBP28.3■■■□□ 2.12
CALM1-215ENST00000557123 PPP6R1Q9UPN7 881 aa28.3■■■□□ 2.12
CALM1-215ENST00000557123 PTPRKQ15262 1439 aa28.29■■■□□ 2.12
CALM1-215ENST00000557123 ATP7AQ04656 1500 aa28.28■■■□□ 2.12
CALM1-215ENST00000557123 PLXNC1O60486 1568 aa28.27■■■□□ 2.12
CALM1-215ENST00000557123 MED1Q15648 1581 aaPredicted RBP28.25■■■□□ 2.11
CALM1-215ENST00000557123 A2MP01023 1474 aa28.25■■■□□ 2.11
CALM1-215ENST00000557123 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
CALM1-215ENST00000557123 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.11
CALM1-215ENST00000557123 HSPA1LP34931 641 aa28.22■■■□□ 2.11
CALM1-215ENST00000557123 INO80Q9ULG1 1556 aaPredicted RBP28.21■■■□□ 2.11
CALM1-215ENST00000557123 GGT6Q6P531 493 aa28.21■■■□□ 2.11
CALM1-215ENST00000557123 PLEKHH2Q8IVE3 1493 aa28.21■■■□□ 2.11
CALM1-215ENST00000557123 KIAA1107Q9UPP5 1409 aa28.2■■■□□ 2.11
CALM1-215ENST00000557123 GPATCH8Q9UKJ3 1502 aaKnown RBP28.2■■■□□ 2.1
CALM1-215ENST00000557123 TOM1O60784 492 aa28.19■■■□□ 2.1
CALM1-215ENST00000557123 A2ML1A8K2U0 1454 aa28.19■■■□□ 2.1
CALM1-215ENST00000557123 PIP4K2BP78356 416 aa28.18■■■□□ 2.1
CALM1-215ENST00000557123 CPS1P31327 1500 aa28.18■■■□□ 2.1
CALM1-215ENST00000557123 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
CALM1-215ENST00000557123 DNMT1P26358 1616 aaKnown RBP28.15■■■□□ 2.1
CALM1-215ENST00000557123 POLR1AO95602 1720 aaPredicted RBP28.14■■■□□ 2.1
CALM1-215ENST00000557123 ADGBQ8N7X0 1667 aa28.13■■■□□ 2.09
CALM1-215ENST00000557123 CFDP1Q9UEE9 299 aaPredicted RBP28.13■■■□□ 2.09
CALM1-215ENST00000557123 SHANK2Q9UPX8 1470 aa28.1■■■□□ 2.09
CALM1-215ENST00000557123 NEURL4Q96JN8 1562 aa28.08■■■□□ 2.09
CALM1-215ENST00000557123 PHF23Q9BUL5 403 aaPredicted RBP28.08■■■□□ 2.09
CALM1-215ENST00000557123 CCNB3Q8WWL7 1395 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms