RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 CDK13Q14004 1512 aaKnown RBP15.67■□□□□ 0.1
SRP54-213ENST00000556994 NCOA1Q15788 1441 aa15.65■□□□□ 0.1
SRP54-213ENST00000556994 EPRSP07814 1512 aaKnown RBP15.65■□□□□ 0.1
SRP54-213ENST00000556994 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
SRP54-213ENST00000556994 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
SRP54-213ENST00000556994 KIF7Q2M1P5 1343 aa15.63■□□□□ 0.09
SRP54-213ENST00000556994 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
SRP54-213ENST00000556994 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
SRP54-213ENST00000556994 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
SRP54-213ENST00000556994 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
SRP54-213ENST00000556994 ANKRD30BQ9BXX2 1392 aa15.61■□□□□ 0.09
SRP54-213ENST00000556994 ZBED9Q6R2W3 1325 aa15.61■□□□□ 0.09
SRP54-213ENST00000556994 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
SRP54-213ENST00000556994 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
SRP54-213ENST00000556994 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
SRP54-213ENST00000556994 KIF21AQ7Z4S6 1674 aa15.59■□□□□ 0.09
SRP54-213ENST00000556994 RPRD2Q5VT52 1461 aaKnown RBP15.58■□□□□ 0.08
SRP54-213ENST00000556994 DAPK1P53355 1430 aa15.57■□□□□ 0.08
SRP54-213ENST00000556994 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
SRP54-213ENST00000556994 IQGAP2Q13576 1575 aa15.56■□□□□ 0.08
SRP54-213ENST00000556994 TEX14Q8IWB6 1497 aa15.56■□□□□ 0.08
SRP54-213ENST00000556994 SPATA31E1Q6ZUB1 1445 aa15.55■□□□□ 0.08
SRP54-213ENST00000556994 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
SRP54-213ENST00000556994 ABCC5O15440 1437 aa15.55■□□□□ 0.08
SRP54-213ENST00000556994 WDR62O43379 1518 aa15.54■□□□□ 0.08
SRP54-213ENST00000556994 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
SRP54-213ENST00000556994 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
SRP54-213ENST00000556994 DNMT1P26358 1616 aaKnown RBP15.48■□□□□ 0.07
SRP54-213ENST00000556994 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
SRP54-213ENST00000556994 DHX29Q7Z478 1369 aaKnown RBP15.48■□□□□ 0.07
SRP54-213ENST00000556994 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
SRP54-213ENST00000556994 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
SRP54-213ENST00000556994 USP47Q96K76 1375 aa15.45■□□□□ 0.06
SRP54-213ENST00000556994 PZPP20742 1482 aa15.45■□□□□ 0.06
SRP54-213ENST00000556994 POLR1AO95602 1720 aaPredicted RBP15.45■□□□□ 0.06
SRP54-213ENST00000556994 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
SRP54-213ENST00000556994 PKD2Q13563 968 aa15.45■□□□□ 0.06
SRP54-213ENST00000556994 SMG6Q86US8 1419 aaKnown RBP15.45■□□□□ 0.06
SRP54-213ENST00000556994 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
SRP54-213ENST00000556994 NUP153P49790 1475 aaKnown RBP15.44■□□□□ 0.06
SRP54-213ENST00000556994 BCORL1Q5H9F3 1711 aa15.44■□□□□ 0.06
SRP54-213ENST00000556994 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
SRP54-213ENST00000556994 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
SRP54-213ENST00000556994 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
SRP54-213ENST00000556994 DISP1Q96F81 1524 aa15.41■□□□□ 0.06
SRP54-213ENST00000556994 NBR1Q14596 966 aa15.4■□□□□ 0.06
SRP54-213ENST00000556994 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
SRP54-213ENST00000556994 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
SRP54-213ENST00000556994 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
SRP54-213ENST00000556994 KIAA1107Q9UPP5 1409 aa15.39■□□□□ 0.05
SRP54-213ENST00000556994 ZNF608Q9ULD9 1512 aaPredicted RBP15.39■□□□□ 0.05
SRP54-213ENST00000556994 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
SRP54-213ENST00000556994 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
SRP54-213ENST00000556994 KIAA0556O60303 1618 aa15.38■□□□□ 0.05
SRP54-213ENST00000556994 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
SRP54-213ENST00000556994 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
SRP54-213ENST00000556994 DEKP35659 375 aaKnown RBP15.37■□□□□ 0.05
SRP54-213ENST00000556994 CARD11Q9BXL7 1154 aa15.37■□□□□ 0.05
SRP54-213ENST00000556994 RAPGEF6Q8TEU7 1601 aa15.37■□□□□ 0.05
SRP54-213ENST00000556994 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
SRP54-213ENST00000556994 KIAA0586Q9BVV6 1533 aa15.35■□□□□ 0.05
SRP54-213ENST00000556994 KDM5CP41229 1560 aa15.35■□□□□ 0.05
SRP54-213ENST00000556994 ST20-MTHFSA0A0A6YYL1 179 aa15.34■□□□□ 0.05
SRP54-213ENST00000556994 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
SRP54-213ENST00000556994 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
SRP54-213ENST00000556994 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.04
SRP54-213ENST00000556994 KIF14Q15058 1648 aa15.32■□□□□ 0.04
SRP54-213ENST00000556994 NUP155O75694 1391 aa15.32■□□□□ 0.04
SRP54-213ENST00000556994 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
SRP54-213ENST00000556994 ARID4BQ4LE39 1312 aaPredicted RBP15.31■□□□□ 0.04
SRP54-213ENST00000556994 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
SRP54-213ENST00000556994 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
SRP54-213ENST00000556994 ANP32AP39687 249 aaKnown RBP15.31■□□□□ 0.04
SRP54-213ENST00000556994 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
SRP54-213ENST00000556994 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
SRP54-213ENST00000556994 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
SRP54-213ENST00000556994 KIF15Q9NS87 1388 aa15.29■□□□□ 0.04
SRP54-213ENST00000556994 FBLN2P98095 1184 aa15.29■□□□□ 0.04
SRP54-213ENST00000556994 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
SRP54-213ENST00000556994 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
SRP54-213ENST00000556994 EXOC6Q8TAG9 804 aa15.28■□□□□ 0.04
SRP54-213ENST00000556994 ADGRL2O95490 1459 aa15.28■□□□□ 0.04
SRP54-213ENST00000556994 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
SRP54-213ENST00000556994 MYBBP1AQ9BQG0 1328 aaKnown RBP15.27■□□□□ 0.04
SRP54-213ENST00000556994 RALGAPBQ86X10 1494 aa15.27■□□□□ 0.03
SRP54-213ENST00000556994 ITSN2Q9NZM3 1697 aa15.27■□□□□ 0.03
SRP54-213ENST00000556994 UHRF1BP1Q6BDS2 1440 aa15.26■□□□□ 0.03
SRP54-213ENST00000556994 AEBP2Q6ZN18 517 aaPredicted RBP15.26■□□□□ 0.03
SRP54-213ENST00000556994 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
SRP54-213ENST00000556994 LRPPRCP42704 1394 aaKnown RBP15.26■□□□□ 0.03
SRP54-213ENST00000556994 RRP1P56182 461 aaKnown RBP15.26■□□□□ 0.03
SRP54-213ENST00000556994 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
SRP54-213ENST00000556994 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
SRP54-213ENST00000556994 CROCC2H7BZ55 1655 aa15.24■□□□□ 0.03
SRP54-213ENST00000556994 BRD4O60885 1362 aaPredicted RBP15.24■□□□□ 0.03
SRP54-213ENST00000556994 RALBP1Q15311 655 aa15.24■□□□□ 0.03
SRP54-213ENST00000556994 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
SRP54-213ENST00000556994 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
SRP54-213ENST00000556994 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
SRP54-213ENST00000556994 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms