RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-215ENST00000556839 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
RALGAPA1-215ENST00000556839 NLRP6P59044 892 aa14.65□□□□□ -0.06
RALGAPA1-215ENST00000556839 STK24Q9Y6E0 443 aa14.65□□□□□ -0.06
RALGAPA1-215ENST00000556839 ZSWIM6Q9HCJ5 1215 aa14.62□□□□□ -0.07
RALGAPA1-215ENST00000556839 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
RALGAPA1-215ENST00000556839 STK25O00506 426 aa14.59□□□□□ -0.07
RALGAPA1-215ENST00000556839 VARS2Q5ST30 1063 aaKnown RBP14.58□□□□□ -0.08
RALGAPA1-215ENST00000556839 FBXO22Q8NEZ5 403 aa14.57□□□□□ -0.08
RALGAPA1-215ENST00000556839 MFRPQ9BY79 579 aa14.53□□□□□ -0.08
RALGAPA1-215ENST00000556839 GPR153Q6NV75 609 aa14.52□□□□□ -0.08
RALGAPA1-215ENST00000556839 ARSIQ5FYB1 569 aa14.46□□□□□ -0.09
RALGAPA1-215ENST00000556839 ZNF687Q8N1G0 1237 aa14.45□□□□□ -0.1
RALGAPA1-215ENST00000556839 RGL2O15211 777 aa14.44□□□□□ -0.1
RALGAPA1-215ENST00000556839 PKD2Q13563 968 aa14.44□□□□□ -0.1
RALGAPA1-215ENST00000556839 C2orf72A6NCS6 295 aa14.4□□□□□ -0.1
RALGAPA1-215ENST00000556839 KIF3CO14782 793 aa14.39□□□□□ -0.11
RALGAPA1-215ENST00000556839 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.111e-6■■■■□ 22.5
RALGAPA1-215ENST00000556839 RNF166Q96A37 237 aaPredicted RBP14.38□□□□□ -0.11
RALGAPA1-215ENST00000556839 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
RALGAPA1-215ENST00000556839 TMC2Q8TDI7 906 aa14.34□□□□□ -0.11
RALGAPA1-215ENST00000556839 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
RALGAPA1-215ENST00000556839 NUDT7P0C024 238 aa14.3□□□□□ -0.12
RALGAPA1-215ENST00000556839 PTGER2P43116 358 aa14.29□□□□□ -0.12
RALGAPA1-215ENST00000556839 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.12
RALGAPA1-215ENST00000556839 SLC34A2O95436 690 aa14.25□□□□□ -0.13
RALGAPA1-215ENST00000556839 PCDHGA4Q9Y5G9 962 aa14.25□□□□□ -0.13
RALGAPA1-215ENST00000556839 PPP1R37O75864 691 aa14.24□□□□□ -0.13
RALGAPA1-215ENST00000556839 LSM11P83369 360 aaKnown RBP eCLIP14.21□□□□□ -0.13
RALGAPA1-215ENST00000556839 LHX6Q9UPM6 363 aa14.21□□□□□ -0.13
RALGAPA1-215ENST00000556839 PBX2P40425 430 aa14.18□□□□□ -0.14
RALGAPA1-215ENST00000556839 HS6ST3Q8IZP7 471 aa14.17□□□□□ -0.14
RALGAPA1-215ENST00000556839 AXIN2Q9Y2T1 843 aa14.13□□□□□ -0.15
RALGAPA1-215ENST00000556839 PSDA5PKW4 1024 aaPredicted RBP14.1□□□□□ -0.15
RALGAPA1-215ENST00000556839 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
RALGAPA1-215ENST00000556839 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
RALGAPA1-215ENST00000556839 FOXK1P85037 733 aa14.09□□□□□ -0.15
RALGAPA1-215ENST00000556839 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
RALGAPA1-215ENST00000556839 PTCD2Q8WV60 388 aaKnown RBP14.08□□□□□ -0.16
RALGAPA1-215ENST00000556839 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.16
RALGAPA1-215ENST00000556839 ARHGAP33O14559 1287 aa14.03□□□□□ -0.16
RALGAPA1-215ENST00000556839 DSG2Q14126 1118 aa14.02□□□□□ -0.17
RALGAPA1-215ENST00000556839 TBC1D12O60347 775 aa14.01□□□□□ -0.17
RALGAPA1-215ENST00000556839 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
RALGAPA1-215ENST00000556839 ADGRD1Q6QNK2 874 aa14□□□□□ -0.17
RALGAPA1-215ENST00000556839 PPP4R3BQ5MIZ7 849 aa13.98□□□□□ -0.17
RALGAPA1-215ENST00000556839 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
RALGAPA1-215ENST00000556839 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
RALGAPA1-215ENST00000556839 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
RALGAPA1-215ENST00000556839 PSEN2P49810 448 aa13.92□□□□□ -0.18
RALGAPA1-215ENST00000556839 TK2O00142 265 aa13.91□□□□□ -0.18
RALGAPA1-215ENST00000556839 DMRTA1Q5VZB9 504 aa13.91□□□□□ -0.18
RALGAPA1-215ENST00000556839 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
RALGAPA1-215ENST00000556839 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
RALGAPA1-215ENST00000556839 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
RALGAPA1-215ENST00000556839 OXER1Q8TDS5 423 aa13.87□□□□□ -0.19
RALGAPA1-215ENST00000556839 KCNK17Q96T54 332 aa13.87□□□□□ -0.19
RALGAPA1-215ENST00000556839 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
RALGAPA1-215ENST00000556839 HRO43593 1189 aa13.86□□□□□ -0.19
RALGAPA1-215ENST00000556839 PPP1R15BQ5SWA1 713 aa13.86□□□□□ -0.19
RALGAPA1-215ENST00000556839 STAC3Q96MF2 364 aa13.85□□□□□ -0.19
RALGAPA1-215ENST00000556839 PLA2G2EQ9NZK7 142 aa13.84□□□□□ -0.19
RALGAPA1-215ENST00000556839 ZNF454Q8N9F8 522 aa13.81□□□□□ -0.2
RALGAPA1-215ENST00000556839 PDE4AP27815 886 aa13.8□□□□□ -0.2
RALGAPA1-215ENST00000556839 KCTD12Q96CX2 325 aaKnown RBP13.78□□□□□ -0.2
RALGAPA1-215ENST00000556839 NCKAP5LQ9HCH0 1330 aa13.78□□□□□ -0.2
RALGAPA1-215ENST00000556839 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
RALGAPA1-215ENST00000556839 VPS9D1Q9Y2B5 631 aa13.74□□□□□ -0.21
RALGAPA1-215ENST00000556839 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
RALGAPA1-215ENST00000556839 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
RALGAPA1-215ENST00000556839 FOSBP53539 338 aa13.71□□□□□ -0.21
RALGAPA1-215ENST00000556839 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
RALGAPA1-215ENST00000556839 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.21
RALGAPA1-215ENST00000556839 PTPREP23469 700 aa13.7□□□□□ -0.22
RALGAPA1-215ENST00000556839 EVI5O60447 810 aa13.69□□□□□ -0.22
RALGAPA1-215ENST00000556839 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
RALGAPA1-215ENST00000556839 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
RALGAPA1-215ENST00000556839 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.22
RALGAPA1-215ENST00000556839 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
RALGAPA1-215ENST00000556839 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
RALGAPA1-215ENST00000556839 PTPN5P54829 565 aa13.64□□□□□ -0.23
RALGAPA1-215ENST00000556839 MFSD10Q14728 455 aa13.63□□□□□ -0.23
RALGAPA1-215ENST00000556839 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
RALGAPA1-215ENST00000556839 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
RALGAPA1-215ENST00000556839 ADAM33Q9BZ11 813 aa13.61□□□□□ -0.23
RALGAPA1-215ENST00000556839 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
RALGAPA1-215ENST00000556839 BHMG1C9JSJ3 638 aaPredicted RBP13.59□□□□□ -0.23
RALGAPA1-215ENST00000556839 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
RALGAPA1-215ENST00000556839 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
RALGAPA1-215ENST00000556839 WNT2BQ93097 391 aa13.56□□□□□ -0.24
RALGAPA1-215ENST00000556839 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
RALGAPA1-215ENST00000556839 PPP1R3GB7ZBB8 358 aa13.52□□□□□ -0.25
RALGAPA1-215ENST00000556839 CADPS2Q86UW7 1296 aa13.51□□□□□ -0.25
RALGAPA1-215ENST00000556839 PCDHGA10Q9Y5H3 936 aa13.51□□□□□ -0.25
RALGAPA1-215ENST00000556839 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
RALGAPA1-215ENST00000556839 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
RALGAPA1-215ENST00000556839 PHF14O94880 888 aa13.46□□□□□ -0.25
RALGAPA1-215ENST00000556839 RABGEF1Q9UJ41 708 aa13.45□□□□□ -0.26
RALGAPA1-215ENST00000556839 PROX2Q3B8N5 592 aa13.44□□□□□ -0.26
RALGAPA1-215ENST00000556839 COL9A1P20849 921 aa13.43□□□□□ -0.26
RALGAPA1-215ENST00000556839 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms