RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CFAP74Q9C0B2 1584 aa22.48■■□□□ 1.19
SLIRP-207ENST00000556831 PLCH2O75038 1416 aa22.48■■□□□ 1.19
SLIRP-207ENST00000556831 PHLDB1Q86UU1 1377 aa22.47■■□□□ 1.19
SLIRP-207ENST00000556831 RICTORQ6R327 1708 aa22.46■■□□□ 1.19
SLIRP-207ENST00000556831 CDC42BPBQ9Y5S2 1711 aa22.43■■□□□ 1.18
SLIRP-207ENST00000556831 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
SLIRP-207ENST00000556831 CDC42BPAQ5VT25 1732 aa22.39■■□□□ 1.17
SLIRP-207ENST00000556831 PREX2Q70Z35 1606 aa22.39■■□□□ 1.17
SLIRP-207ENST00000556831 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
SLIRP-207ENST00000556831 SCAPERQ9BY12 1400 aa22.37■■□□□ 1.17
SLIRP-207ENST00000556831 SIGLEC1Q9BZZ2 1709 aa22.35■■□□□ 1.17
SLIRP-207ENST00000556831 MTUS2Q5JR59 1369 aa22.35■■□□□ 1.17
SLIRP-207ENST00000556831 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
SLIRP-207ENST00000556831 POGZQ7Z3K3 1410 aa22.33■■□□□ 1.17
SLIRP-207ENST00000556831 YEATS2Q9ULM3 1422 aa22.33■■□□□ 1.17
SLIRP-207ENST00000556831 ARHGEF40Q8TER5 1519 aa22.33■■□□□ 1.17
SLIRP-207ENST00000556831 CERKQ8TCT0 537 aa22.33■■□□□ 1.17
SLIRP-207ENST00000556831 ZMYM4Q5VZL5 1548 aa22.32■■□□□ 1.16
SLIRP-207ENST00000556831 ARHGEF12Q9NZN5 1544 aa22.32■■□□□ 1.16
SLIRP-207ENST00000556831 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
SLIRP-207ENST00000556831 GPATCH8Q9UKJ3 1502 aaKnown RBP22.3■■□□□ 1.16
SLIRP-207ENST00000556831 EHBP1L1Q8N3D4 1523 aa22.29■■□□□ 1.16
SLIRP-207ENST00000556831 ABCC1P33527 1531 aa22.28■■□□□ 1.16
SLIRP-207ENST00000556831 TIAM1Q13009 1591 aa22.28■■□□□ 1.16
SLIRP-207ENST00000556831 SAMD9LQ8IVG5 1584 aa22.27■■□□□ 1.16
SLIRP-207ENST00000556831 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
SLIRP-207ENST00000556831 ZFYVE16Q7Z3T8 1539 aa22.26■■□□□ 1.15
SLIRP-207ENST00000556831 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
SLIRP-207ENST00000556831 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
SLIRP-207ENST00000556831 KDM5CP41229 1560 aa22.23■■□□□ 1.15
SLIRP-207ENST00000556831 CCNB3Q8WWL7 1395 aa22.22■■□□□ 1.15
SLIRP-207ENST00000556831 BCORL1Q5H9F3 1711 aa22.21■■□□□ 1.15
SLIRP-207ENST00000556831 APLP2Q06481 763 aa22.21■■□□□ 1.15
SLIRP-207ENST00000556831 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
SLIRP-207ENST00000556831 SYCP2Q9BX26 1530 aa22.21■■□□□ 1.15
SLIRP-207ENST00000556831 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.15
SLIRP-207ENST00000556831 PTPRMP28827 1452 aa22.19■■□□□ 1.14
SLIRP-207ENST00000556831 ZNF518AQ6AHZ1 1483 aa22.19■■□□□ 1.14
SLIRP-207ENST00000556831 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
SLIRP-207ENST00000556831 KANK4Q5T7N3 995 aaPredicted RBP22.18■■□□□ 1.14
SLIRP-207ENST00000556831 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
SLIRP-207ENST00000556831 MADDQ8WXG6 1647 aa22.17■■□□□ 1.14
SLIRP-207ENST00000556831 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
SLIRP-207ENST00000556831 MAGI2Q86UL8 1455 aa22.17■■□□□ 1.14
SLIRP-207ENST00000556831 ZNF644Q9H582 1327 aaPredicted RBP22.17■■□□□ 1.14
SLIRP-207ENST00000556831 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
SLIRP-207ENST00000556831 ARID4BQ4LE39 1312 aaPredicted RBP22.16■■□□□ 1.14
SLIRP-207ENST00000556831 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
SLIRP-207ENST00000556831 HNRNPMP52272 730 aaKnown RBP eCLIP22.14■■□□□ 1.135e-9■■■■■ 34.7
SLIRP-207ENST00000556831 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
SLIRP-207ENST00000556831 MYT1LQ9UL68 1186 aa22.14■■□□□ 1.13
SLIRP-207ENST00000556831 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
SLIRP-207ENST00000556831 KIDINS220Q9ULH0 1771 aa22.14■■□□□ 1.13
SLIRP-207ENST00000556831 ATP10AO60312 1499 aa22.12■■□□□ 1.13
SLIRP-207ENST00000556831 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
SLIRP-207ENST00000556831 MLH3Q9UHC1 1453 aa22.1■■□□□ 1.13
SLIRP-207ENST00000556831 RIMS1Q86UR5 1692 aaKnown RBP22.1■■□□□ 1.13
SLIRP-207ENST00000556831 C9orf84Q5VXU9 1444 aa22.09■■□□□ 1.13
SLIRP-207ENST00000556831 MLECQ14165 292 aa22.09■■□□□ 1.13
SLIRP-207ENST00000556831 MBD5Q9P267 1494 aa22.06■■□□□ 1.12
SLIRP-207ENST00000556831 KIAA1107Q9UPP5 1409 aa22.05■■□□□ 1.12
SLIRP-207ENST00000556831 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
SLIRP-207ENST00000556831 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
SLIRP-207ENST00000556831 FER1L4A9Z1Z3 1794 aa22.02■■□□□ 1.11
SLIRP-207ENST00000556831 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
SLIRP-207ENST00000556831 REREQ9P2R6 1566 aa22.01■■□□□ 1.11
SLIRP-207ENST00000556831 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
SLIRP-207ENST00000556831 SPAG9O60271 1321 aaKnown RBP21.99■■□□□ 1.11
SLIRP-207ENST00000556831 MYOM3Q5VTT5 1437 aa21.94■■□□□ 1.1
SLIRP-207ENST00000556831 AGLP35573 1532 aa21.94■■□□□ 1.1
SLIRP-207ENST00000556831 PLXNC1O60486 1568 aa21.93■■□□□ 1.1
SLIRP-207ENST00000556831 ADGBQ8N7X0 1667 aa21.92■■□□□ 1.1
SLIRP-207ENST00000556831 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
SLIRP-207ENST00000556831 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
SLIRP-207ENST00000556831 ARHGEF5Q12774 1597 aa21.9■■□□□ 1.1
SLIRP-207ENST00000556831 MIA2Q96PC5 1412 aa21.89■■□□□ 1.1
SLIRP-207ENST00000556831 A2MP01023 1474 aa21.89■■□□□ 1.09
SLIRP-207ENST00000556831 RSPH4AQ5TD94 716 aa21.88■■□□□ 1.09
SLIRP-207ENST00000556831 HSPA2P54652 639 aa21.86■■□□□ 1.09
SLIRP-207ENST00000556831 PTPN23Q9H3S7 1636 aa21.84■■□□□ 1.09
SLIRP-207ENST00000556831 RTEL1-TNFRSF6BF6WH68 1400 aa21.84■■□□□ 1.09
SLIRP-207ENST00000556831 C3P01024 1663 aa21.84■■□□□ 1.09
SLIRP-207ENST00000556831 TSPY4P0CV99 314 aa21.83■■□□□ 1.09
SLIRP-207ENST00000556831 TSPY10P0CW01 314 aa21.83■■□□□ 1.09
SLIRP-207ENST00000556831 ESF1Q9H501 851 aaKnown RBP21.82■■□□□ 1.08
SLIRP-207ENST00000556831 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
SLIRP-207ENST00000556831 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
SLIRP-207ENST00000556831 CLTCQ00610 1675 aaKnown RBP21.79■■□□□ 1.08
SLIRP-207ENST00000556831 MAST1Q9Y2H9 1570 aa21.79■■□□□ 1.08
SLIRP-207ENST00000556831 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
SLIRP-207ENST00000556831 CROCC2H7BZ55 1655 aa21.78■■□□□ 1.08
SLIRP-207ENST00000556831 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.08
SLIRP-207ENST00000556831 DHX29Q7Z478 1369 aaKnown RBP21.77■■□□□ 1.08
SLIRP-207ENST00000556831 ABCC5O15440 1437 aa21.77■■□□□ 1.08
SLIRP-207ENST00000556831 TCOF1Q13428 1488 aaKnown RBP21.77■■□□□ 1.07
SLIRP-207ENST00000556831 GGT6Q6P531 493 aa21.76■■□□□ 1.07
SLIRP-207ENST00000556831 DNMT1P26358 1616 aaKnown RBP21.73■■□□□ 1.07
SLIRP-207ENST00000556831 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
SLIRP-207ENST00000556831 PREX1Q8TCU6 1659 aa21.72■■□□□ 1.07
SLIRP-207ENST00000556831 DAPK1P53355 1430 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms