RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 DCBLD2Q96PD2 775 aa8.98□□□□□ -0.97
TRAV15-201ENST00000556680 SEMA3EO15041 775 aa8.97□□□□□ -0.97
TRAV15-201ENST00000556680 IRX5P78411 483 aaPredicted RBP8.97□□□□□ -0.97
TRAV15-201ENST00000556680 PPP1R15BQ5SWA1 713 aa8.97□□□□□ -0.97
TRAV15-201ENST00000556680 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
TRAV15-201ENST00000556680 SEC24BO95487 1268 aa8.96□□□□□ -0.98
TRAV15-201ENST00000556680 BOLA1Q9Y3E2 137 aa8.96□□□□□ -0.98
TRAV15-201ENST00000556680 SMYD5Q6GMV2 418 aa8.95□□□□□ -0.98
TRAV15-201ENST00000556680 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
TRAV15-201ENST00000556680 L3MBTL3Q96JM7 780 aaPredicted RBP8.94□□□□□ -0.98
TRAV15-201ENST00000556680 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
TRAV15-201ENST00000556680 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
TRAV15-201ENST00000556680 DSG2Q14126 1118 aa8.92□□□□□ -0.98
TRAV15-201ENST00000556680 POTEHQ6S545 545 aa8.92□□□□□ -0.98
TRAV15-201ENST00000556680 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
TRAV15-201ENST00000556680 FOXK1P85037 733 aa8.89□□□□□ -0.99
TRAV15-201ENST00000556680 SLC39A7Q92504 469 aa8.89□□□□□ -0.99
TRAV15-201ENST00000556680 PLPP6Q8IY26 295 aa8.88□□□□□ -0.99
TRAV15-201ENST00000556680 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
TRAV15-201ENST00000556680 C2orf72A6NCS6 295 aa8.87□□□□□ -0.99
TRAV15-201ENST00000556680 DPYSL4O14531 572 aa8.86□□□□□ -0.99
TRAV15-201ENST00000556680 C7P10643 843 aa8.86□□□□□ -0.99
TRAV15-201ENST00000556680 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
TRAV15-201ENST00000556680 SPDYE16A6NNV3 312 aaPredicted RBP8.85□□□□□ -0.99
TRAV15-201ENST00000556680 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
TRAV15-201ENST00000556680 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
TRAV15-201ENST00000556680 MAP3K9P80192 1104 aa8.83□□□□□ -1
TRAV15-201ENST00000556680 KIF3CO14782 793 aa8.82□□□□□ -1
TRAV15-201ENST00000556680 MLLT3P42568 568 aaPredicted RBP8.81□□□□□ -1
TRAV15-201ENST00000556680 METRNQ9UJH8 293 aa8.81□□□□□ -1
TRAV15-201ENST00000556680 C3orf67Q6ZVT6 689 aa8.8□□□□□ -1
TRAV15-201ENST00000556680 PDIA6Q15084 440 aa8.79□□□□□ -1
TRAV15-201ENST00000556680 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
TRAV15-201ENST00000556680 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -1
TRAV15-201ENST00000556680 POTEFA5A3E0 1075 aa8.77□□□□□ -1.01
TRAV15-201ENST00000556680 TBC1D12O60347 775 aa8.77□□□□□ -1.01
TRAV15-201ENST00000556680 TMEM92Q6UXU6 159 aa8.77□□□□□ -1.01
TRAV15-201ENST00000556680 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
TRAV15-201ENST00000556680 POTEIP0CG38 1075 aa8.76□□□□□ -1.01
TRAV15-201ENST00000556680 GRXCR2A6NFK2 248 aa8.75□□□□□ -1.01
TRAV15-201ENST00000556680 ZMYND10O75800 440 aa8.75□□□□□ -1.01
TRAV15-201ENST00000556680 GPIHBP1Q8IV16 184 aa8.75□□□□□ -1.01
TRAV15-201ENST00000556680 SLC24A3Q9HC58 644 aa8.75□□□□□ -1.01
TRAV15-201ENST00000556680 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
TRAV15-201ENST00000556680 OXER1Q8TDS5 423 aa8.73□□□□□ -1.01
TRAV15-201ENST00000556680 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
TRAV15-201ENST00000556680 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.02
TRAV15-201ENST00000556680 BARGINQ6ZT62 677 aa8.71□□□□□ -1.02
TRAV15-201ENST00000556680 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
TRAV15-201ENST00000556680 EVI5O60447 810 aa8.68□□□□□ -1.02
TRAV15-201ENST00000556680 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
TRAV15-201ENST00000556680 DDX12PQ92771 950 aa8.68□□□□□ -1.02
TRAV15-201ENST00000556680 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
TRAV15-201ENST00000556680 PTCD2Q8WV60 388 aaKnown RBP8.67□□□□□ -1.02
TRAV15-201ENST00000556680 PTGER2P43116 358 aa8.66□□□□□ -1.02
TRAV15-201ENST00000556680 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
TRAV15-201ENST00000556680 AK7Q96M32 723 aa8.66□□□□□ -1.02
TRAV15-201ENST00000556680 SLC34A2O95436 690 aa8.64□□□□□ -1.03
TRAV15-201ENST00000556680 OSBPP22059 807 aa8.64□□□□□ -1.03
TRAV15-201ENST00000556680 ANO8Q9HCE9 1232 aaPredicted RBP8.6□□□□□ -1.03
TRAV15-201ENST00000556680 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
TRAV15-201ENST00000556680 FCHSD2O94868 740 aa8.59□□□□□ -1.03
TRAV15-201ENST00000556680 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
TRAV15-201ENST00000556680 MINK1Q8N4C8 1332 aaPredicted RBP8.57□□□□□ -1.04
TRAV15-201ENST00000556680 GNPATO15228 680 aa8.57□□□□□ -1.04
TRAV15-201ENST00000556680 GPR37O15354 613 aa8.57□□□□□ -1.04
TRAV15-201ENST00000556680 HIC1Q14526 733 aa8.57□□□□□ -1.04
TRAV15-201ENST00000556680 EPAS1Q99814 870 aa8.57□□□□□ -1.04
TRAV15-201ENST00000556680 TRIM66O15016 1216 aa8.56□□□□□ -1.04
TRAV15-201ENST00000556680 PHF14O94880 888 aa8.56□□□□□ -1.04
TRAV15-201ENST00000556680 MAP3K7O43318 606 aa8.55□□□□□ -1.04
TRAV15-201ENST00000556680 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
TRAV15-201ENST00000556680 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
TRAV15-201ENST00000556680 RBM33Q96EV2 1170 aaKnown RBP8.55□□□□□ -1.04
TRAV15-201ENST00000556680 IRF6O14896 467 aa8.54□□□□□ -1.04
TRAV15-201ENST00000556680 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
TRAV15-201ENST00000556680 PDE4DQ08499 809 aa8.54□□□□□ -1.04
TRAV15-201ENST00000556680 DOK7Q18PE1 504 aa8.54□□□□□ -1.04
TRAV15-201ENST00000556680 SCUBE2Q9NQ36 999 aa8.54□□□□□ -1.04
TRAV15-201ENST00000556680 RIMBP2O15034 1052 aa8.53□□□□□ -1.04
TRAV15-201ENST00000556680 PTGDRQ13258 359 aa8.53□□□□□ -1.04
TRAV15-201ENST00000556680 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
TRAV15-201ENST00000556680 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
TRAV15-201ENST00000556680 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
TRAV15-201ENST00000556680 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
TRAV15-201ENST00000556680 TYW1BQ6NUM6 668 aa8.52□□□□□ -1.05
TRAV15-201ENST00000556680 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
TRAV15-201ENST00000556680 POTEJP0CG39 1038 aa8.51□□□□□ -1.05
TRAV15-201ENST00000556680 FECHP22830 423 aa8.51□□□□□ -1.05
TRAV15-201ENST00000556680 ZNF710Q8N1W2 664 aa8.51□□□□□ -1.05
TRAV15-201ENST00000556680 CCDC102AQ96A19 550 aa8.51□□□□□ -1.05
TRAV15-201ENST00000556680 POTEB2H3BUK9 544 aa8.5□□□□□ -1.05
TRAV15-201ENST00000556680 ARSIQ5FYB1 569 aa8.5□□□□□ -1.05
TRAV15-201ENST00000556680 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
TRAV15-201ENST00000556680 FBXW7Q969H0 707 aa8.5□□□□□ -1.05
TRAV15-201ENST00000556680 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
TRAV15-201ENST00000556680 NUDT7P0C024 238 aa8.49□□□□□ -1.05
TRAV15-201ENST00000556680 JPH4Q96JJ6 628 aa8.49□□□□□ -1.05
TRAV15-201ENST00000556680 ZNF454Q8N9F8 522 aa8.48□□□□□ -1.05
TRAV15-201ENST00000556680 CDHR5Q9HBB8 845 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms