RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 ABCC5O15440 1437 aa27.56■■■□□ 2
SDR39U1-218ENST00000556262 DNMT1P26358 1616 aaKnown RBP27.55■■■□□ 2
SDR39U1-218ENST00000556262 KCNH8Q96L42 1107 aa27.55■■■□□ 2
SDR39U1-218ENST00000556262 TTC37Q6PGP7 1564 aa27.52■■■□□ 2
SDR39U1-218ENST00000556262 CLSPNQ9HAW4 1339 aa27.52■■■□□ 2
SDR39U1-218ENST00000556262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.52■■■□□ 2
SDR39U1-218ENST00000556262 CDC42BPBQ9Y5S2 1711 aa27.48■■□□□ 1.99
SDR39U1-218ENST00000556262 PREX2Q70Z35 1606 aa27.47■■□□□ 1.99
SDR39U1-218ENST00000556262 GCC2Q8IWJ2 1684 aa27.45■■□□□ 1.99
SDR39U1-218ENST00000556262 AKNAQ7Z591 1439 aa27.45■■□□□ 1.99
SDR39U1-218ENST00000556262 MAPKBP1O60336 1514 aa27.45■■□□□ 1.98
SDR39U1-218ENST00000556262 ROCK1Q13464 1354 aa27.42■■□□□ 1.98
SDR39U1-218ENST00000556262 KDM6BO15054 1643 aa27.41■■□□□ 1.98
SDR39U1-218ENST00000556262 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
SDR39U1-218ENST00000556262 MYO5CQ9NQX4 1742 aa27.39■■□□□ 1.98
SDR39U1-218ENST00000556262 CROCC2H7BZ55 1655 aa27.39■■□□□ 1.98
SDR39U1-218ENST00000556262 ARHGAP5Q13017 1502 aa27.39■■□□□ 1.97
SDR39U1-218ENST00000556262 HNRNPMP52272 730 aaKnown RBP eCLIP27.39■■□□□ 1.97
SDR39U1-218ENST00000556262 WDR7Q9Y4E6 1490 aa27.38■■□□□ 1.97
SDR39U1-218ENST00000556262 NCOA1Q15788 1441 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 ASXL2Q76L83 1435 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 MBD5Q9P267 1494 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 ADGBQ8N7X0 1667 aa27.33■■□□□ 1.97
SDR39U1-218ENST00000556262 PLCH2O75038 1416 aa27.32■■□□□ 1.96
SDR39U1-218ENST00000556262 NPM1P06748 294 aaKnown RBP eCLIP27.31■■□□□ 1.96
SDR39U1-218ENST00000556262 ARHGEF5Q12774 1597 aa27.3■■□□□ 1.96
SDR39U1-218ENST00000556262 ADGRL2O95490 1459 aa27.3■■□□□ 1.96
SDR39U1-218ENST00000556262 C9orf84Q5VXU9 1444 aa27.29■■□□□ 1.96
SDR39U1-218ENST00000556262 SYCP2Q9BX26 1530 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 TRIM52Q96A61 297 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 TSPY4P0CV99 314 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 TSPY10P0CW01 314 aa27.28■■□□□ 1.96
SDR39U1-218ENST00000556262 SHANK2Q9UPX8 1470 aa27.27■■□□□ 1.96
SDR39U1-218ENST00000556262 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
SDR39U1-218ENST00000556262 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
SDR39U1-218ENST00000556262 CCDC141Q6ZP82 1450 aa27.25■■□□□ 1.95
SDR39U1-218ENST00000556262 EFCAB2Q5VUJ9 269 aa27.24■■□□□ 1.95
SDR39U1-218ENST00000556262 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
SDR39U1-218ENST00000556262 RIMBP3CA6NJZ7 1639 aa27.23■■□□□ 1.95
SDR39U1-218ENST00000556262 RIMBP3BA6NNM3 1639 aa27.23■■□□□ 1.95
SDR39U1-218ENST00000556262 RIMBP3Q9UFD9 1639 aa27.23■■□□□ 1.95
SDR39U1-218ENST00000556262 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
SDR39U1-218ENST00000556262 ABCA9Q8IUA7 1624 aa27.21■■□□□ 1.95
SDR39U1-218ENST00000556262 RSPH4AQ5TD94 716 aa27.2■■□□□ 1.95
SDR39U1-218ENST00000556262 ARHGEF12Q9NZN5 1544 aa27.2■■□□□ 1.95
SDR39U1-218ENST00000556262 KIAA1107Q9UPP5 1409 aa27.2■■□□□ 1.94
SDR39U1-218ENST00000556262 PLEKHH2Q8IVE3 1493 aa27.19■■□□□ 1.94
SDR39U1-218ENST00000556262 DENND4BO75064 1496 aaPredicted RBP27.18■■□□□ 1.94
SDR39U1-218ENST00000556262 ARAP3Q8WWN8 1544 aa27.16■■□□□ 1.94
SDR39U1-218ENST00000556262 MPHOSPH9Q99550 1183 aa27.16■■□□□ 1.94
SDR39U1-218ENST00000556262 ANKRD50Q9ULJ7 1429 aa27.15■■□□□ 1.94
SDR39U1-218ENST00000556262 ABCC1P33527 1531 aa27.14■■□□□ 1.94
SDR39U1-218ENST00000556262 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
SDR39U1-218ENST00000556262 ACIN1Q9UKV3 1341 aaKnown RBP27.12■■□□□ 1.93
SDR39U1-218ENST00000556262 FANCAO15360 1455 aa27.11■■□□□ 1.93
SDR39U1-218ENST00000556262 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
SDR39U1-218ENST00000556262 MAST1Q9Y2H9 1570 aa27.09■■□□□ 1.93
SDR39U1-218ENST00000556262 FOXD1Q16676 465 aa27.08■■□□□ 1.93
SDR39U1-218ENST00000556262 SLC4A1APQ9BWU0 796 aaKnown RBP27.06■■□□□ 1.92
SDR39U1-218ENST00000556262 PZPP20742 1482 aa27.04■■□□□ 1.92
SDR39U1-218ENST00000556262 AFAP1Q8N556 730 aa27.04■■□□□ 1.92
SDR39U1-218ENST00000556262 CD109Q6YHK3 1445 aa27.02■■□□□ 1.92
SDR39U1-218ENST00000556262 ZNF316A6NFI3 1004 aaPredicted RBP27.01■■□□□ 1.91
SDR39U1-218ENST00000556262 PLXNC1O60486 1568 aa27■■□□□ 1.91
SDR39U1-218ENST00000556262 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
SDR39U1-218ENST00000556262 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
SDR39U1-218ENST00000556262 SCAPERQ9BY12 1400 aa26.97■■□□□ 1.91
SDR39U1-218ENST00000556262 NUP155O75694 1391 aa26.97■■□□□ 1.91
SDR39U1-218ENST00000556262 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
SDR39U1-218ENST00000556262 TONSLQ96HA7 1378 aa26.96■■□□□ 1.91
SDR39U1-218ENST00000556262 ANKRD30BQ9BXX2 1392 aa26.94■■□□□ 1.9
SDR39U1-218ENST00000556262 ZFYVE16Q7Z3T8 1539 aa26.91■■□□□ 1.9
SDR39U1-218ENST00000556262 DUOX2Q9NRD8 1548 aa26.91■■□□□ 1.9
SDR39U1-218ENST00000556262 PKD2Q13563 968 aa26.91■■□□□ 1.9
SDR39U1-218ENST00000556262 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
SDR39U1-218ENST00000556262 KDM5DQ9BY66 1539 aa26.9■■□□□ 1.9
SDR39U1-218ENST00000556262 RTEL1-TNFRSF6BF6WH68 1400 aa26.89■■□□□ 1.9
SDR39U1-218ENST00000556262 CFAP74Q9C0B2 1584 aa26.86■■□□□ 1.89
SDR39U1-218ENST00000556262 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
SDR39U1-218ENST00000556262 ERBINQ96RT1 1412 aa26.85■■□□□ 1.89
SDR39U1-218ENST00000556262 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
SDR39U1-218ENST00000556262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.896e-6■□□□□ 8.3
SDR39U1-218ENST00000556262 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
SDR39U1-218ENST00000556262 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
SDR39U1-218ENST00000556262 UNC13BO14795 1591 aa26.83■■□□□ 1.88
SDR39U1-218ENST00000556262 MAP3K4Q9Y6R4 1608 aa26.82■■□□□ 1.88
SDR39U1-218ENST00000556262 FAM135AQ9P2D6 1515 aa26.82■■□□□ 1.88
SDR39U1-218ENST00000556262 RPRD2Q5VT52 1461 aaKnown RBP26.81■■□□□ 1.88
SDR39U1-218ENST00000556262 ZNF518AQ6AHZ1 1483 aa26.8■■□□□ 1.88
SDR39U1-218ENST00000556262 FAM69CQ0P6D2 419 aa26.8■■□□□ 1.88
SDR39U1-218ENST00000556262 GLI2P10070 1586 aa26.79■■□□□ 1.88
SDR39U1-218ENST00000556262 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
SDR39U1-218ENST00000556262 NEO1Q92859 1461 aa26.77■■□□□ 1.88
SDR39U1-218ENST00000556262 DIP2BQ9P265 1576 aa26.77■■□□□ 1.88
SDR39U1-218ENST00000556262 POGZQ7Z3K3 1410 aa26.77■■□□□ 1.88
SDR39U1-218ENST00000556262 KIDINS220Q9ULH0 1771 aa26.76■■□□□ 1.87
SDR39U1-218ENST00000556262 L3MBTL2Q969R5 705 aa26.75■■□□□ 1.87
SDR39U1-218ENST00000556262 MAGI2Q86UL8 1455 aa26.74■■□□□ 1.87
SDR39U1-218ENST00000556262 IQGAP3Q86VI3 1631 aa26.73■■□□□ 1.87
SDR39U1-218ENST00000556262 KDM5CP41229 1560 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms