RNA–Protein interactions for RNA: ENST00000556232.5

AP4S1-208, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

TSL 4

Gene AP4S1, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-208ENST00000556232 SAMD9Q5K651 1589 aa15.98■□□□□ 0.15
AP4S1-208ENST00000556232 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
AP4S1-208ENST00000556232 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
AP4S1-208ENST00000556232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.97■□□□□ 0.15
AP4S1-208ENST00000556232 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
AP4S1-208ENST00000556232 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.15
AP4S1-208ENST00000556232 ATP10AO60312 1499 aa15.95■□□□□ 0.14
AP4S1-208ENST00000556232 SCAPERQ9BY12 1400 aa15.94■□□□□ 0.14
AP4S1-208ENST00000556232 ARHGEF12Q9NZN5 1544 aa15.94■□□□□ 0.14
AP4S1-208ENST00000556232 PTPRTO14522 1441 aa15.93■□□□□ 0.14
AP4S1-208ENST00000556232 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
AP4S1-208ENST00000556232 SETD1BQ9UPS6 1966 aaKnown RBP15.92■□□□□ 0.14
AP4S1-208ENST00000556232 UHRF1BP1Q6BDS2 1440 aa15.92■□□□□ 0.14
AP4S1-208ENST00000556232 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
AP4S1-208ENST00000556232 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
AP4S1-208ENST00000556232 PLCH2O75038 1416 aa15.9■□□□□ 0.14
AP4S1-208ENST00000556232 EFCAB2Q5VUJ9 269 aa15.88■□□□□ 0.13
AP4S1-208ENST00000556232 LTBP4Q8N2S1 1624 aa15.86■□□□□ 0.13
AP4S1-208ENST00000556232 IQSEC2Q5JU85 1478 aa15.85■□□□□ 0.13
AP4S1-208ENST00000556232 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
AP4S1-208ENST00000556232 AFAP1Q8N556 730 aa15.82■□□□□ 0.12
AP4S1-208ENST00000556232 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
AP4S1-208ENST00000556232 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
AP4S1-208ENST00000556232 C3P01024 1663 aa15.79■□□□□ 0.12
AP4S1-208ENST00000556232 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
AP4S1-208ENST00000556232 UBAP1LF5GYI3 381 aa15.77■□□□□ 0.12
AP4S1-208ENST00000556232 CDK13Q14004 1512 aaKnown RBP15.77■□□□□ 0.11
AP4S1-208ENST00000556232 NCOA1Q15788 1441 aa15.77■□□□□ 0.11
AP4S1-208ENST00000556232 ATP1B4Q9UN42 357 aaPredicted RBP15.76■□□□□ 0.11
AP4S1-208ENST00000556232 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
AP4S1-208ENST00000556232 MYO5CQ9NQX4 1742 aa15.76■□□□□ 0.11
AP4S1-208ENST00000556232 KDM5CP41229 1560 aa15.74■□□□□ 0.11
AP4S1-208ENST00000556232 REREQ9P2R6 1566 aa15.74■□□□□ 0.11
AP4S1-208ENST00000556232 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
AP4S1-208ENST00000556232 DIP2CQ9Y2E4 1556 aa15.72■□□□□ 0.11
AP4S1-208ENST00000556232 MLH3Q9UHC1 1453 aa15.71■□□□□ 0.11
AP4S1-208ENST00000556232 ZNF335Q9H4Z2 1342 aaPredicted RBP15.71■□□□□ 0.11
AP4S1-208ENST00000556232 AGLP35573 1532 aa15.71■□□□□ 0.11
AP4S1-208ENST00000556232 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
AP4S1-208ENST00000556232 CAMSAP1Q5T5Y3 1602 aa15.7■□□□□ 0.1
AP4S1-208ENST00000556232 CNTLNQ9NXG0 1405 aa15.69■□□□□ 0.1
AP4S1-208ENST00000556232 PKD2Q13563 968 aa15.68■□□□□ 0.1
AP4S1-208ENST00000556232 KIF14Q15058 1648 aa15.67■□□□□ 0.1
AP4S1-208ENST00000556232 ABCA6Q8N139 1617 aa15.67■□□□□ 0.1
AP4S1-208ENST00000556232 NPATQ14207 1427 aa15.67■□□□□ 0.1
AP4S1-208ENST00000556232 ZMYM3Q14202 1370 aa15.66■□□□□ 0.1
AP4S1-208ENST00000556232 EEA1Q15075 1411 aa15.66■□□□□ 0.1
AP4S1-208ENST00000556232 TROQ12816 1431 aaPredicted RBP15.65■□□□□ 0.1
AP4S1-208ENST00000556232 HSPA1LP34931 641 aa15.64■□□□□ 0.09
AP4S1-208ENST00000556232 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
AP4S1-208ENST00000556232 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
AP4S1-208ENST00000556232 CLIP1P30622 1438 aa15.62■□□□□ 0.09
AP4S1-208ENST00000556232 TOM1O60784 492 aa15.61■□□□□ 0.09
AP4S1-208ENST00000556232 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
AP4S1-208ENST00000556232 MROH2AA6NES4 1674 aa15.6■□□□□ 0.09
AP4S1-208ENST00000556232 PIP4K2BP78356 416 aa15.6■□□□□ 0.09
AP4S1-208ENST00000556232 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
AP4S1-208ENST00000556232 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
AP4S1-208ENST00000556232 MED1Q15648 1581 aaPredicted RBP15.59■□□□□ 0.09
AP4S1-208ENST00000556232 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
AP4S1-208ENST00000556232 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
AP4S1-208ENST00000556232 ABCC1P33527 1531 aa15.57■□□□□ 0.08
AP4S1-208ENST00000556232 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
AP4S1-208ENST00000556232 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
AP4S1-208ENST00000556232 SUPT6HQ7KZ85 1726 aaKnown RBP15.56■□□□□ 0.08
AP4S1-208ENST00000556232 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
AP4S1-208ENST00000556232 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
AP4S1-208ENST00000556232 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
AP4S1-208ENST00000556232 PTPRKQ15262 1439 aa15.53■□□□□ 0.08
AP4S1-208ENST00000556232 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
AP4S1-208ENST00000556232 CEP170BQ9Y4F5 1589 aaPredicted RBP15.53■□□□□ 0.08
AP4S1-208ENST00000556232 SPAG9O60271 1321 aaKnown RBP15.52■□□□□ 0.08
AP4S1-208ENST00000556232 CLTCQ00610 1675 aaKnown RBP15.52■□□□□ 0.08
AP4S1-208ENST00000556232 GGT6Q6P531 493 aa15.52■□□□□ 0.08
AP4S1-208ENST00000556232 ZNF777Q9ULD5 760 aaPredicted RBP15.52■□□□□ 0.08
AP4S1-208ENST00000556232 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.08
AP4S1-208ENST00000556232 HNRNPMP52272 730 aaKnown RBP eCLIP15.51■□□□□ 0.07
AP4S1-208ENST00000556232 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
AP4S1-208ENST00000556232 LRRIQ1Q96JM4 1722 aa15.51■□□□□ 0.07
AP4S1-208ENST00000556232 SAMD9LQ8IVG5 1584 aa15.5■□□□□ 0.07
AP4S1-208ENST00000556232 CPS1P31327 1500 aa15.49■□□□□ 0.07
AP4S1-208ENST00000556232 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
AP4S1-208ENST00000556232 CDC42BPAQ5VT25 1732 aa15.47■□□□□ 0.07
AP4S1-208ENST00000556232 A2ML1A8K2U0 1454 aa15.46■□□□□ 0.07
AP4S1-208ENST00000556232 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.06
AP4S1-208ENST00000556232 A2MP01023 1474 aa15.46■□□□□ 0.06
AP4S1-208ENST00000556232 ANKLE2Q86XL3 938 aa15.44■□□□□ 0.06
AP4S1-208ENST00000556232 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
AP4S1-208ENST00000556232 PLXNC1O60486 1568 aa15.42■□□□□ 0.06
AP4S1-208ENST00000556232 CCDC18Q5T9S5 1454 aa15.42■□□□□ 0.06
AP4S1-208ENST00000556232 SYCP2Q9BX26 1530 aa15.42■□□□□ 0.06
AP4S1-208ENST00000556232 KIAA1107Q9UPP5 1409 aa15.42■□□□□ 0.06
AP4S1-208ENST00000556232 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
AP4S1-208ENST00000556232 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
AP4S1-208ENST00000556232 GPATCH8Q9UKJ3 1502 aaKnown RBP15.41■□□□□ 0.06
AP4S1-208ENST00000556232 CASKIN1Q8WXD9 1431 aa15.41■□□□□ 0.06
AP4S1-208ENST00000556232 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
AP4S1-208ENST00000556232 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
AP4S1-208ENST00000556232 NEURL4Q96JN8 1562 aa15.4■□□□□ 0.06
AP4S1-208ENST00000556232 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms