RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 SCAPERQ9BY12 1400 aa27.97■■■□□ 2.07
XRCC3-215ENST00000555964 LMTK3Q96Q04 1460 aa27.95■■■□□ 2.06
XRCC3-215ENST00000555964 YEATS2Q9ULM3 1422 aa27.94■■■□□ 2.06
XRCC3-215ENST00000555964 EFCAB2Q5VUJ9 269 aa27.94■■■□□ 2.06
XRCC3-215ENST00000555964 FER1L4A9Z1Z3 1794 aa27.94■■■□□ 2.06
XRCC3-215ENST00000555964 CLIP1P30622 1438 aa27.93■■■□□ 2.06
XRCC3-215ENST00000555964 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
XRCC3-215ENST00000555964 TROQ12816 1431 aaPredicted RBP27.91■■■□□ 2.06
XRCC3-215ENST00000555964 SIGLEC1Q9BZZ2 1709 aa27.89■■■□□ 2.05
XRCC3-215ENST00000555964 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
XRCC3-215ENST00000555964 C9orf84Q5VXU9 1444 aa27.87■■■□□ 2.05
XRCC3-215ENST00000555964 ATP10AO60312 1499 aa27.87■■■□□ 2.05
XRCC3-215ENST00000555964 ZNF518AQ6AHZ1 1483 aa27.87■■■□□ 2.05
XRCC3-215ENST00000555964 FBXO41Q8TF61 875 aa27.86■■■□□ 2.05
XRCC3-215ENST00000555964 ARHGAP5Q13017 1502 aa27.86■■■□□ 2.05
XRCC3-215ENST00000555964 LRRIQ1Q96JM4 1722 aa27.82■■■□□ 2.04
XRCC3-215ENST00000555964 MLECQ14165 292 aa27.81■■■□□ 2.04
XRCC3-215ENST00000555964 CCDC18Q5T9S5 1454 aa27.81■■■□□ 2.04
XRCC3-215ENST00000555964 ARHGEF12Q9NZN5 1544 aa27.8■■■□□ 2.04
XRCC3-215ENST00000555964 KDM5CP41229 1560 aa27.8■■■□□ 2.04
XRCC3-215ENST00000555964 PLPPR3Q6T4P5 718 aa27.78■■■□□ 2.04
XRCC3-215ENST00000555964 CDC42BPBQ9Y5S2 1711 aa27.75■■■□□ 2.03
XRCC3-215ENST00000555964 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
XRCC3-215ENST00000555964 PREX2Q70Z35 1606 aa27.74■■■□□ 2.03
XRCC3-215ENST00000555964 PREX1Q8TCU6 1659 aa27.73■■■□□ 2.03
XRCC3-215ENST00000555964 MYT1LQ9UL68 1186 aa27.72■■■□□ 2.03
XRCC3-215ENST00000555964 REREQ9P2R6 1566 aa27.72■■■□□ 2.03
XRCC3-215ENST00000555964 HSPA2P54652 639 aa27.7■■■□□ 2.02
XRCC3-215ENST00000555964 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
XRCC3-215ENST00000555964 ABCC1P33527 1531 aa27.68■■■□□ 2.02
XRCC3-215ENST00000555964 SETD1BQ9UPS6 1966 aaKnown RBP27.68■■■□□ 2.02
XRCC3-215ENST00000555964 AFAP1Q8N556 730 aa27.68■■■□□ 2.02
XRCC3-215ENST00000555964 MLH3Q9UHC1 1453 aa27.68■■■□□ 2.02
XRCC3-215ENST00000555964 FYCO1Q9BQS8 1478 aa27.67■■■□□ 2.02
XRCC3-215ENST00000555964 ITSN2Q9NZM3 1697 aa27.67■■■□□ 2.02
XRCC3-215ENST00000555964 ABCA6Q8N139 1617 aa27.64■■■□□ 2.02
XRCC3-215ENST00000555964 CDC42BPAQ5VT25 1732 aa27.64■■■□□ 2.01
XRCC3-215ENST00000555964 AGLP35573 1532 aa27.6■■■□□ 2.01
XRCC3-215ENST00000555964 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2
XRCC3-215ENST00000555964 ESF1Q9H501 851 aaKnown RBP27.57■■■□□ 2
XRCC3-215ENST00000555964 TRAPPC8Q9Y2L5 1435 aa27.57■■■□□ 2
XRCC3-215ENST00000555964 KIDINS220Q9ULH0 1771 aa27.55■■■□□ 2
XRCC3-215ENST00000555964 C3P01024 1663 aa27.53■■■□□ 2
XRCC3-215ENST00000555964 CEBPAP49715 358 aaPredicted RBP27.53■■■□□ 2
XRCC3-215ENST00000555964 DMRT2Q9Y5R5 561 aa27.53■■■□□ 2
XRCC3-215ENST00000555964 CNTLNQ9NXG0 1405 aa27.51■■□□□ 1.99
XRCC3-215ENST00000555964 CERKQ8TCT0 537 aa27.49■■□□□ 1.99
XRCC3-215ENST00000555964 SAMD9LQ8IVG5 1584 aa27.48■■□□□ 1.99
XRCC3-215ENST00000555964 PLEKHH2Q8IVE3 1493 aa27.47■■□□□ 1.99
XRCC3-215ENST00000555964 STRCQ7RTU9 1775 aa27.47■■□□□ 1.99
XRCC3-215ENST00000555964 SYCP2Q9BX26 1530 aa27.46■■□□□ 1.99
XRCC3-215ENST00000555964 GPATCH8Q9UKJ3 1502 aaKnown RBP27.46■■□□□ 1.99
XRCC3-215ENST00000555964 ZNF777Q9ULD5 760 aaPredicted RBP27.44■■□□□ 1.98
XRCC3-215ENST00000555964 MROH2AA6NES4 1674 aa27.43■■□□□ 1.98
XRCC3-215ENST00000555964 SPAG9O60271 1321 aaKnown RBP27.41■■□□□ 1.98
XRCC3-215ENST00000555964 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
XRCC3-215ENST00000555964 CCNB3Q8WWL7 1395 aa27.4■■□□□ 1.98
XRCC3-215ENST00000555964 MTUS2Q5JR59 1369 aa27.39■■□□□ 1.98
XRCC3-215ENST00000555964 CFDP1Q9UEE9 299 aaPredicted RBP27.39■■□□□ 1.98
XRCC3-215ENST00000555964 ATP7AQ04656 1500 aa27.39■■□□□ 1.98
XRCC3-215ENST00000555964 SUPT6HQ7KZ85 1726 aaKnown RBP27.38■■□□□ 1.97
XRCC3-215ENST00000555964 INO80Q9ULG1 1556 aaPredicted RBP27.37■■□□□ 1.97
XRCC3-215ENST00000555964 PTPRTO14522 1441 aa27.36■■□□□ 1.97
XRCC3-215ENST00000555964 NPATQ14207 1427 aa27.36■■□□□ 1.97
XRCC3-215ENST00000555964 HNRNPMP52272 730 aaKnown RBP eCLIP27.33■■□□□ 1.975e-6■■■■□ 20.3
XRCC3-215ENST00000555964 PLXNC1O60486 1568 aa27.33■■□□□ 1.97
XRCC3-215ENST00000555964 EHBP1L1Q8N3D4 1523 aa27.32■■□□□ 1.96
XRCC3-215ENST00000555964 ADGBQ8N7X0 1667 aa27.31■■□□□ 1.96
XRCC3-215ENST00000555964 A2MP01023 1474 aa27.31■■□□□ 1.96
XRCC3-215ENST00000555964 NCOA1Q15788 1441 aa27.28■■□□□ 1.96
XRCC3-215ENST00000555964 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
XRCC3-215ENST00000555964 ZMYM3Q14202 1370 aa27.27■■□□□ 1.96
XRCC3-215ENST00000555964 TIAM1Q13009 1591 aa27.26■■□□□ 1.96
XRCC3-215ENST00000555964 PPP6R1Q9UPN7 881 aa27.23■■□□□ 1.95
XRCC3-215ENST00000555964 ZNF142P52746 1687 aaPredicted RBP27.23■■□□□ 1.95
XRCC3-215ENST00000555964 CEP162Q5TB80 1403 aa27.23■■□□□ 1.95
XRCC3-215ENST00000555964 CAMSAP1Q5T5Y3 1602 aa27.23■■□□□ 1.95
XRCC3-215ENST00000555964 MYO3AQ8NEV4 1616 aa27.2■■□□□ 1.95
XRCC3-215ENST00000555964 IQSEC2Q5JU85 1478 aa27.19■■□□□ 1.94
XRCC3-215ENST00000555964 RTEL1-TNFRSF6BF6WH68 1400 aa27.19■■□□□ 1.94
XRCC3-215ENST00000555964 GGT6Q6P531 493 aa27.16■■□□□ 1.94
XRCC3-215ENST00000555964 MBD5Q9P267 1494 aa27.16■■□□□ 1.94
XRCC3-215ENST00000555964 CEP170BQ9Y4F5 1589 aaPredicted RBP27.15■■□□□ 1.94
XRCC3-215ENST00000555964 PLA2R1Q13018 1463 aa27.15■■□□□ 1.94
XRCC3-215ENST00000555964 LTBP4Q8N2S1 1624 aa27.15■■□□□ 1.94
XRCC3-215ENST00000555964 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
XRCC3-215ENST00000555964 CCDC141Q6ZP82 1450 aa27.12■■□□□ 1.93
XRCC3-215ENST00000555964 FAM135AQ9P2D6 1515 aa27.11■■□□□ 1.93
XRCC3-215ENST00000555964 PKD2Q13563 968 aa27.11■■□□□ 1.93
XRCC3-215ENST00000555964 ZNF644Q9H582 1327 aaPredicted RBP27.11■■□□□ 1.93
XRCC3-215ENST00000555964 RSPH4AQ5TD94 716 aa27.1■■□□□ 1.93
XRCC3-215ENST00000555964 DHX29Q7Z478 1369 aaKnown RBP27.09■■□□□ 1.93
XRCC3-215ENST00000555964 NCOA2Q15596 1464 aa27.08■■□□□ 1.93
XRCC3-215ENST00000555964 CAMSAP2Q08AD1 1489 aa27.06■■□□□ 1.92
XRCC3-215ENST00000555964 TCOF1Q13428 1488 aaKnown RBP27.05■■□□□ 1.92
XRCC3-215ENST00000555964 NCKAP5LQ9HCH0 1330 aa27.04■■□□□ 1.92
XRCC3-215ENST00000555964 A2ML1A8K2U0 1454 aa27.04■■□□□ 1.92
XRCC3-215ENST00000555964 KDM5DQ9BY66 1539 aa27.03■■□□□ 1.92
XRCC3-215ENST00000555964 ARHGEF5Q12774 1597 aa27.01■■□□□ 1.92
XRCC3-215ENST00000555964 DISP3Q9P2K9 1392 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms