RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 HOXB1P14653 301 aaPredicted RBP9.8□□□□□ -0.84
FOXN3-210ENST00000555658 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
FOXN3-210ENST00000555658 ERBB3P21860 1342 aa9.8□□□□□ -0.84
FOXN3-210ENST00000555658 TMEM92Q6UXU6 159 aa9.79□□□□□ -0.84
FOXN3-210ENST00000555658 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
FOXN3-210ENST00000555658 CHGAP10645 457 aaKnown RBP9.72□□□□□ -0.85
FOXN3-210ENST00000555658 HS6ST3Q8IZP7 471 aa9.72□□□□□ -0.85
FOXN3-210ENST00000555658 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
FOXN3-210ENST00000555658 POTEB3A0JP26 581 aa9.7□□□□□ -0.86
FOXN3-210ENST00000555658 VARS2Q5ST30 1063 aaKnown RBP9.7□□□□□ -0.86
FOXN3-210ENST00000555658 POTEBQ6S5H4 581 aa9.7□□□□□ -0.86
FOXN3-210ENST00000555658 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
FOXN3-210ENST00000555658 MMRN1Q13201 1228 aa9.68□□□□□ -0.86
FOXN3-210ENST00000555658 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
FOXN3-210ENST00000555658 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
FOXN3-210ENST00000555658 RYDENQ9NUL5 291 aaKnown RBP9.68□□□□□ -0.86
FOXN3-210ENST00000555658 KRTAP3-3Q9BYR6 98 aa9.65□□□□□ -0.86
FOXN3-210ENST00000555658 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
FOXN3-210ENST00000555658 KIF3CO14782 793 aa9.64□□□□□ -0.87
FOXN3-210ENST00000555658 PPP1R37O75864 691 aa9.64□□□□□ -0.87
FOXN3-210ENST00000555658 DCAF8L2P0C7V8 631 aa9.61□□□□□ -0.87
FOXN3-210ENST00000555658 ZNF687Q8N1G0 1237 aa9.61□□□□□ -0.87
FOXN3-210ENST00000555658 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
FOXN3-210ENST00000555658 SLC34A2O95436 690 aa9.59□□□□□ -0.87
FOXN3-210ENST00000555658 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■□ 23
FOXN3-210ENST00000555658 PCDHGA4Q9Y5G9 962 aa9.58□□□□□ -0.88
FOXN3-210ENST00000555658 NUDT7P0C024 238 aa9.57□□□□□ -0.88
FOXN3-210ENST00000555658 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
FOXN3-210ENST00000555658 TBC1D12O60347 775 aa9.54□□□□□ -0.88
FOXN3-210ENST00000555658 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
FOXN3-210ENST00000555658 FOXK1P85037 733 aa9.53□□□□□ -0.88
FOXN3-210ENST00000555658 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
FOXN3-210ENST00000555658 PSDA5PKW4 1024 aaPredicted RBP9.52□□□□□ -0.89
FOXN3-210ENST00000555658 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.89
FOXN3-210ENST00000555658 PBX2P40425 430 aa9.51□□□□□ -0.89
FOXN3-210ENST00000555658 PTGER2P43116 358 aa9.51□□□□□ -0.89
FOXN3-210ENST00000555658 NKX1-1Q15270 411 aaPredicted RBP9.51□□□□□ -0.89
FOXN3-210ENST00000555658 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
FOXN3-210ENST00000555658 MYT1LQ9UL68 1186 aa9.5□□□□□ -0.89
FOXN3-210ENST00000555658 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
FOXN3-210ENST00000555658 DSG2Q14126 1118 aa9.48□□□□□ -0.89
FOXN3-210ENST00000555658 PTCD2Q8WV60 388 aaKnown RBP9.48□□□□□ -0.89
FOXN3-210ENST00000555658 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■■■□□ 16.1
FOXN3-210ENST00000555658 PDE4AP27815 886 aa9.45□□□□□ -0.9
FOXN3-210ENST00000555658 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
FOXN3-210ENST00000555658 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
FOXN3-210ENST00000555658 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
FOXN3-210ENST00000555658 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
FOXN3-210ENST00000555658 PPP1R15BQ5SWA1 713 aa9.41□□□□□ -0.9
FOXN3-210ENST00000555658 UPF1Q92900 1129 aaKnown RBP eCLIP9.41□□□□□ -0.9
FOXN3-210ENST00000555658 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
FOXN3-210ENST00000555658 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
FOXN3-210ENST00000555658 STAC3Q96MF2 364 aa9.37□□□□□ -0.91
FOXN3-210ENST00000555658 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
FOXN3-210ENST00000555658 OXER1Q8TDS5 423 aa9.36□□□□□ -0.91
FOXN3-210ENST00000555658 DDX27Q96GQ7 796 aaKnown RBP9.36□□□□□ -0.91
FOXN3-210ENST00000555658 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
FOXN3-210ENST00000555658 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
FOXN3-210ENST00000555658 ADGRD1Q6QNK2 874 aa9.33□□□□□ -0.92
FOXN3-210ENST00000555658 POTEEQ6S8J3 1075 aa9.33□□□□□ -0.92
FOXN3-210ENST00000555658 TK2O00142 265 aa9.32□□□□□ -0.92
FOXN3-210ENST00000555658 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
FOXN3-210ENST00000555658 ZNF454Q8N9F8 522 aa9.32□□□□□ -0.92
FOXN3-210ENST00000555658 KCNK17Q96T54 332 aa9.32□□□□□ -0.92
FOXN3-210ENST00000555658 PSEN2P49810 448 aa9.31□□□□□ -0.92
FOXN3-210ENST00000555658 EVI5O60447 810 aa9.28□□□□□ -0.92
FOXN3-210ENST00000555658 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
FOXN3-210ENST00000555658 MFSD10Q14728 455 aa9.27□□□□□ -0.93
FOXN3-210ENST00000555658 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
FOXN3-210ENST00000555658 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
FOXN3-210ENST00000555658 HCSTQ9UBK5 93 aa9.27□□□□□ -0.93
FOXN3-210ENST00000555658 PTPREP23469 700 aa9.26□□□□□ -0.93
FOXN3-210ENST00000555658 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
FOXN3-210ENST00000555658 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
FOXN3-210ENST00000555658 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
FOXN3-210ENST00000555658 FOSBP53539 338 aa9.24□□□□□ -0.93
FOXN3-210ENST00000555658 ZDHHC16Q969W1 377 aa9.23□□□□□ -0.93
FOXN3-210ENST00000555658 ANO8Q9HCE9 1232 aaPredicted RBP9.23□□□□□ -0.93
FOXN3-210ENST00000555658 HRO43593 1189 aa9.21□□□□□ -0.94
FOXN3-210ENST00000555658 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
FOXN3-210ENST00000555658 CADPS2Q86UW7 1296 aa9.2□□□□□ -0.94
FOXN3-210ENST00000555658 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
FOXN3-210ENST00000555658 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
FOXN3-210ENST00000555658 VPS9D1Q9Y2B5 631 aa9.2□□□□□ -0.94
FOXN3-210ENST00000555658 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
FOXN3-210ENST00000555658 EMILIN3Q9NT22 766 aa9.18□□□□□ -0.94
FOXN3-210ENST00000555658 FBXW7Q969H0 707 aa9.16□□□□□ -0.94
FOXN3-210ENST00000555658 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
FOXN3-210ENST00000555658 NBPF3Q9H094 633 aa9.16□□□□□ -0.94
FOXN3-210ENST00000555658 TYW1BQ6NUM6 668 aa9.15□□□□□ -0.94
FOXN3-210ENST00000555658 MRPL50Q8N5N7 158 aaKnown RBP9.15□□□□□ -0.94
FOXN3-210ENST00000555658 PLA2G2EQ9NZK7 142 aa9.15□□□□□ -0.94
FOXN3-210ENST00000555658 NISCHQ9Y2I1 1504 aa9.15□□□□□ -0.95
FOXN3-210ENST00000555658 PHF14O94880 888 aa9.13□□□□□ -0.95
FOXN3-210ENST00000555658 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
FOXN3-210ENST00000555658 DPYSL4O14531 572 aa9.12□□□□□ -0.95
FOXN3-210ENST00000555658 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
FOXN3-210ENST00000555658 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
FOXN3-210ENST00000555658 RTN4Q9NQC3 1192 aaKnown RBP9.12□□□□□ -0.95
FOXN3-210ENST00000555658 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms