RNA–Protein interactions for RNA: ENST00000555175.1

PSMC6-209, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-209ENST00000555175 POTEB3A0JP26 581 aa13.42□□□□□ -0.26
PSMC6-209ENST00000555175 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
PSMC6-209ENST00000555175 POTEBQ6S5H4 581 aa13.42□□□□□ -0.26
PSMC6-209ENST00000555175 KIF3CO14782 793 aa13.41□□□□□ -0.26
PSMC6-209ENST00000555175 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
PSMC6-209ENST00000555175 PPP1R37O75864 691 aa13.41□□□□□ -0.26
PSMC6-209ENST00000555175 HS3ST6Q96QI5 342 aa13.41□□□□□ -0.26
PSMC6-209ENST00000555175 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
PSMC6-209ENST00000555175 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
PSMC6-209ENST00000555175 ZSWIM6Q9HCJ5 1215 aa13.39□□□□□ -0.27
PSMC6-209ENST00000555175 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
PSMC6-209ENST00000555175 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
PSMC6-209ENST00000555175 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
PSMC6-209ENST00000555175 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
PSMC6-209ENST00000555175 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
PSMC6-209ENST00000555175 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
PSMC6-209ENST00000555175 ERBB3P21860 1342 aa13.29□□□□□ -0.28
PSMC6-209ENST00000555175 ARSIQ5FYB1 569 aa13.26□□□□□ -0.29
PSMC6-209ENST00000555175 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
PSMC6-209ENST00000555175 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
PSMC6-209ENST00000555175 KHSRPQ92945 711 aaKnown RBP eCLIP13.23□□□□□ -0.298e-7■■■■□ 19.3
PSMC6-209ENST00000555175 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
PSMC6-209ENST00000555175 SLC34A2O95436 690 aa13.22□□□□□ -0.29
PSMC6-209ENST00000555175 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
PSMC6-209ENST00000555175 FOXK1P85037 733 aa13.17□□□□□ -0.3
PSMC6-209ENST00000555175 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
PSMC6-209ENST00000555175 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
PSMC6-209ENST00000555175 PCDHGA4Q9Y5G9 962 aa13.16□□□□□ -0.3
PSMC6-209ENST00000555175 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
PSMC6-209ENST00000555175 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
PSMC6-209ENST00000555175 GTPBP6O43824 516 aaPredicted RBP13.14□□□□□ -0.31
PSMC6-209ENST00000555175 NUDT7P0C024 238 aa13.13□□□□□ -0.31
PSMC6-209ENST00000555175 DSG2Q14126 1118 aa13.12□□□□□ -0.31
PSMC6-209ENST00000555175 PLPP6Q8IY26 295 aa13.12□□□□□ -0.31
PSMC6-209ENST00000555175 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
PSMC6-209ENST00000555175 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
PSMC6-209ENST00000555175 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
PSMC6-209ENST00000555175 KDM4FA0A1W2PPD8 638 aa13.05□□□□□ -0.32
PSMC6-209ENST00000555175 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
PSMC6-209ENST00000555175 PPP1R15BQ5SWA1 713 aa12.99□□□□□ -0.33
PSMC6-209ENST00000555175 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
PSMC6-209ENST00000555175 PDE4AP27815 886 aa12.97□□□□□ -0.33
PSMC6-209ENST00000555175 OXER1Q8TDS5 423 aa12.97□□□□□ -0.33
PSMC6-209ENST00000555175 PBX2P40425 430 aa12.96□□□□□ -0.33
PSMC6-209ENST00000555175 POTEEQ6S8J3 1075 aa12.96□□□□□ -0.33
PSMC6-209ENST00000555175 PSDA5PKW4 1024 aaPredicted RBP12.95□□□□□ -0.34
PSMC6-209ENST00000555175 TBC1D12O60347 775 aa12.95□□□□□ -0.34
PSMC6-209ENST00000555175 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.34
PSMC6-209ENST00000555175 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
PSMC6-209ENST00000555175 MFSD10Q14728 455 aa12.92□□□□□ -0.34
PSMC6-209ENST00000555175 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
PSMC6-209ENST00000555175 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
PSMC6-209ENST00000555175 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
PSMC6-209ENST00000555175 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
PSMC6-209ENST00000555175 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
PSMC6-209ENST00000555175 DDX27Q96GQ7 796 aaKnown RBP12.9□□□□□ -0.34
PSMC6-209ENST00000555175 AXIN2Q9Y2T1 843 aa12.9□□□□□ -0.34
PSMC6-209ENST00000555175 PTGER2P43116 358 aa12.89□□□□□ -0.35
PSMC6-209ENST00000555175 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
PSMC6-209ENST00000555175 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
PSMC6-209ENST00000555175 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
PSMC6-209ENST00000555175 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
PSMC6-209ENST00000555175 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
PSMC6-209ENST00000555175 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
PSMC6-209ENST00000555175 PSEN2P49810 448 aa12.78□□□□□ -0.36
PSMC6-209ENST00000555175 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
PSMC6-209ENST00000555175 EVI5O60447 810 aa12.77□□□□□ -0.37
PSMC6-209ENST00000555175 ADGRD1Q6QNK2 874 aa12.77□□□□□ -0.37
PSMC6-209ENST00000555175 FOSBP53539 338 aa12.76□□□□□ -0.37
PSMC6-209ENST00000555175 ZNF454Q8N9F8 522 aa12.76□□□□□ -0.37
PSMC6-209ENST00000555175 TK2O00142 265 aa12.75□□□□□ -0.37
PSMC6-209ENST00000555175 SPRYD3Q8NCJ5 442 aa12.74□□□□□ -0.37
PSMC6-209ENST00000555175 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
PSMC6-209ENST00000555175 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
PSMC6-209ENST00000555175 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
PSMC6-209ENST00000555175 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
PSMC6-209ENST00000555175 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
PSMC6-209ENST00000555175 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
PSMC6-209ENST00000555175 HRO43593 1189 aa12.7□□□□□ -0.38
PSMC6-209ENST00000555175 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
PSMC6-209ENST00000555175 ZDHHC16Q969W1 377 aa12.66□□□□□ -0.38
PSMC6-209ENST00000555175 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
PSMC6-209ENST00000555175 PTPREP23469 700 aa12.63□□□□□ -0.39
PSMC6-209ENST00000555175 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
PSMC6-209ENST00000555175 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
PSMC6-209ENST00000555175 DPYSL4O14531 572 aa12.62□□□□□ -0.39
PSMC6-209ENST00000555175 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
PSMC6-209ENST00000555175 SLC4A5Q9BY07 1137 aa12.62□□□□□ -0.39
PSMC6-209ENST00000555175 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
PSMC6-209ENST00000555175 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
PSMC6-209ENST00000555175 PHF14O94880 888 aa12.58□□□□□ -0.4
PSMC6-209ENST00000555175 FBXW7Q969H0 707 aa12.56□□□□□ -0.4
PSMC6-209ENST00000555175 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
PSMC6-209ENST00000555175 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
PSMC6-209ENST00000555175 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
PSMC6-209ENST00000555175 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
PSMC6-209ENST00000555175 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
PSMC6-209ENST00000555175 PDIA6Q15084 440 aa12.51□□□□□ -0.41
PSMC6-209ENST00000555175 COL9A1P20849 921 aa12.5□□□□□ -0.41
PSMC6-209ENST00000555175 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms