RNA–Protein interactions for RNA: ENST00000554658.5

CIPC-203, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4

Gene CIPC, Length 584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-203ENST00000554658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.69■■□□□ 1.38
CIPC-203ENST00000554658 STRCQ7RTU9 1775 aa23.67■■□□□ 1.38
CIPC-203ENST00000554658 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
CIPC-203ENST00000554658 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
CIPC-203ENST00000554658 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
CIPC-203ENST00000554658 C9orf84Q5VXU9 1444 aa23.58■■□□□ 1.36
CIPC-203ENST00000554658 ATP10AO60312 1499 aa23.57■■□□□ 1.36
CIPC-203ENST00000554658 SCAPERQ9BY12 1400 aa23.57■■□□□ 1.36
CIPC-203ENST00000554658 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
CIPC-203ENST00000554658 SETD1BQ9UPS6 1966 aaKnown RBP23.56■■□□□ 1.36
CIPC-203ENST00000554658 CEBPAP49715 358 aaPredicted RBP23.55■■□□□ 1.36
CIPC-203ENST00000554658 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
CIPC-203ENST00000554658 MYO5CQ9NQX4 1742 aa23.5■■□□□ 1.35
CIPC-203ENST00000554658 PLCH2O75038 1416 aa23.5■■□□□ 1.35
CIPC-203ENST00000554658 PTPRTO14522 1441 aa23.49■■□□□ 1.35
CIPC-203ENST00000554658 CDK13Q14004 1512 aaKnown RBP23.48■■□□□ 1.35
CIPC-203ENST00000554658 C3P01024 1663 aa23.46■■□□□ 1.35
CIPC-203ENST00000554658 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
CIPC-203ENST00000554658 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
CIPC-203ENST00000554658 IQSEC2Q5JU85 1478 aa23.44■■□□□ 1.34
CIPC-203ENST00000554658 ZNF518AQ6AHZ1 1483 aa23.42■■□□□ 1.34
CIPC-203ENST00000554658 KDM5CP41229 1560 aa23.4■■□□□ 1.34
CIPC-203ENST00000554658 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
CIPC-203ENST00000554658 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
CIPC-203ENST00000554658 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
CIPC-203ENST00000554658 KIF14Q15058 1648 aa23.35■■□□□ 1.33
CIPC-203ENST00000554658 ABCA6Q8N139 1617 aa23.35■■□□□ 1.33
CIPC-203ENST00000554658 MYT1LQ9UL68 1186 aa23.35■■□□□ 1.33
CIPC-203ENST00000554658 ARHGAP5Q13017 1502 aa23.34■■□□□ 1.33
CIPC-203ENST00000554658 NCOA1Q15788 1441 aa23.33■■□□□ 1.33
CIPC-203ENST00000554658 TRAPPC8Q9Y2L5 1435 aa23.32■■□□□ 1.32
CIPC-203ENST00000554658 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
CIPC-203ENST00000554658 AFAP1Q8N556 730 aa23.3■■□□□ 1.32
CIPC-203ENST00000554658 AGLP35573 1532 aa23.28■■□□□ 1.32
CIPC-203ENST00000554658 EEA1Q15075 1411 aa23.27■■□□□ 1.32
CIPC-203ENST00000554658 CAMSAP1Q5T5Y3 1602 aa23.27■■□□□ 1.32
CIPC-203ENST00000554658 MLH3Q9UHC1 1453 aa23.25■■□□□ 1.31
CIPC-203ENST00000554658 ATP1B4Q9UN42 357 aaPredicted RBP23.25■■□□□ 1.31
CIPC-203ENST00000554658 CDC42BPBQ9Y5S2 1711 aa23.25■■□□□ 1.31
CIPC-203ENST00000554658 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
CIPC-203ENST00000554658 CNTLNQ9NXG0 1405 aa23.24■■□□□ 1.31
CIPC-203ENST00000554658 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
CIPC-203ENST00000554658 MROH2AA6NES4 1674 aa23.22■■□□□ 1.31
CIPC-203ENST00000554658 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
CIPC-203ENST00000554658 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
CIPC-203ENST00000554658 SUPT6HQ7KZ85 1726 aaKnown RBP23.2■■□□□ 1.3
CIPC-203ENST00000554658 CLIP1P30622 1438 aa23.2■■□□□ 1.3
CIPC-203ENST00000554658 FMN1Q68DA7 1419 aa23.2■■□□□ 1.3
CIPC-203ENST00000554658 ABCC1P33527 1531 aa23.19■■□□□ 1.3
CIPC-203ENST00000554658 KIDINS220Q9ULH0 1771 aa23.19■■□□□ 1.3
CIPC-203ENST00000554658 PREX2Q70Z35 1606 aa23.19■■□□□ 1.3
CIPC-203ENST00000554658 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
CIPC-203ENST00000554658 NPATQ14207 1427 aa23.17■■□□□ 1.3
CIPC-203ENST00000554658 LRRIQ1Q96JM4 1722 aa23.16■■□□□ 1.3
CIPC-203ENST00000554658 ZNF142P52746 1687 aaPredicted RBP23.16■■□□□ 1.3
CIPC-203ENST00000554658 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
CIPC-203ENST00000554658 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
CIPC-203ENST00000554658 MED1Q15648 1581 aaPredicted RBP23.13■■□□□ 1.29
CIPC-203ENST00000554658 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
CIPC-203ENST00000554658 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
CIPC-203ENST00000554658 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
CIPC-203ENST00000554658 ARHGAP35Q9NRY4 1499 aa23.08■■□□□ 1.29
CIPC-203ENST00000554658 ZMYM3Q14202 1370 aa23.07■■□□□ 1.28
CIPC-203ENST00000554658 TCOF1Q13428 1488 aaKnown RBP23.06■■□□□ 1.28
CIPC-203ENST00000554658 CDC42BPAQ5VT25 1732 aa23.06■■□□□ 1.28
CIPC-203ENST00000554658 PKD2Q13563 968 aa23.06■■□□□ 1.28
CIPC-203ENST00000554658 SAMD9LQ8IVG5 1584 aa23.05■■□□□ 1.28
CIPC-203ENST00000554658 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
CIPC-203ENST00000554658 HSPA1LP34931 641 aa23.01■■□□□ 1.27
CIPC-203ENST00000554658 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
CIPC-203ENST00000554658 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
CIPC-203ENST00000554658 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
CIPC-203ENST00000554658 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
CIPC-203ENST00000554658 POLR1AO95602 1720 aaPredicted RBP22.98■■□□□ 1.27
CIPC-203ENST00000554658 SYCP2Q9BX26 1530 aa22.98■■□□□ 1.27
CIPC-203ENST00000554658 PLXNC1O60486 1568 aa22.97■■□□□ 1.27
CIPC-203ENST00000554658 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
CIPC-203ENST00000554658 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
CIPC-203ENST00000554658 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
CIPC-203ENST00000554658 CPS1P31327 1500 aa22.95■■□□□ 1.26
CIPC-203ENST00000554658 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
CIPC-203ENST00000554658 INO80Q9ULG1 1556 aaPredicted RBP22.93■■□□□ 1.26
CIPC-203ENST00000554658 TOM1O60784 492 aa22.93■■□□□ 1.26
CIPC-203ENST00000554658 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
CIPC-203ENST00000554658 ZNF777Q9ULD5 760 aaPredicted RBP22.92■■□□□ 1.26
CIPC-203ENST00000554658 DNMT1P26358 1616 aaKnown RBP22.92■■□□□ 1.26
CIPC-203ENST00000554658 A2ML1A8K2U0 1454 aa22.91■■□□□ 1.26
CIPC-203ENST00000554658 A2MP01023 1474 aa22.91■■□□□ 1.26
CIPC-203ENST00000554658 NEURL4Q96JN8 1562 aa22.89■■□□□ 1.25
CIPC-203ENST00000554658 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
CIPC-203ENST00000554658 SHANK2Q9UPX8 1470 aa22.87■■□□□ 1.25
CIPC-203ENST00000554658 GGT6Q6P531 493 aa22.87■■□□□ 1.25
CIPC-203ENST00000554658 CASKIN1Q8WXD9 1431 aa22.87■■□□□ 1.25
CIPC-203ENST00000554658 HNRNPMP52272 730 aaKnown RBP eCLIP22.84■■□□□ 1.25
CIPC-203ENST00000554658 GPATCH8Q9UKJ3 1502 aaKnown RBP22.83■■□□□ 1.25
CIPC-203ENST00000554658 PLEKHH2Q8IVE3 1493 aa22.83■■□□□ 1.25
CIPC-203ENST00000554658 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
CIPC-203ENST00000554658 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
CIPC-203ENST00000554658 ALKQ9UM73 1620 aa22.8■■□□□ 1.24
CIPC-203ENST00000554658 FYCO1Q9BQS8 1478 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms