RNA–Protein interactions for RNA: ENST00000554658.5

CIPC-203, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4

Gene CIPC, Length 584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-203ENST00000554658 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
CIPC-203ENST00000554658 ABCC9O60706 1549 aa33.01■■■□□ 2.87
CIPC-203ENST00000554658 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
CIPC-203ENST00000554658 DNAJC5BQ9UF47 199 aa31.49■■■□□ 2.63
CIPC-203ENST00000554658 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
CIPC-203ENST00000554658 NACADO15069 1562 aa30.73■■■□□ 2.51
CIPC-203ENST00000554658 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
CIPC-203ENST00000554658 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
CIPC-203ENST00000554658 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
CIPC-203ENST00000554658 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
CIPC-203ENST00000554658 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
CIPC-203ENST00000554658 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
CIPC-203ENST00000554658 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
CIPC-203ENST00000554658 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
CIPC-203ENST00000554658 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
CIPC-203ENST00000554658 DNAJC5Q9H3Z4 198 aa29.46■■■□□ 2.31
CIPC-203ENST00000554658 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
CIPC-203ENST00000554658 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
CIPC-203ENST00000554658 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
CIPC-203ENST00000554658 CUX2O14529 1486 aa28.74■■■□□ 2.19
CIPC-203ENST00000554658 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
CIPC-203ENST00000554658 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
CIPC-203ENST00000554658 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
CIPC-203ENST00000554658 NESP48681 1621 aa28.14■■■□□ 2.1
CIPC-203ENST00000554658 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
CIPC-203ENST00000554658 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
CIPC-203ENST00000554658 THOC2Q8NI27 1593 aaKnown RBP28.06■■■□□ 2.08
CIPC-203ENST00000554658 SMARCA4P51532 1647 aa28.01■■■□□ 2.07
CIPC-203ENST00000554658 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
CIPC-203ENST00000554658 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.05
CIPC-203ENST00000554658 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
CIPC-203ENST00000554658 KIF21AQ7Z4S6 1674 aa27.84■■■□□ 2.05
CIPC-203ENST00000554658 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
CIPC-203ENST00000554658 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
CIPC-203ENST00000554658 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
CIPC-203ENST00000554658 MRC2Q9UBG0 1479 aa27.52■■■□□ 2
CIPC-203ENST00000554658 WDR62O43379 1518 aa27.49■■□□□ 1.99
CIPC-203ENST00000554658 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
CIPC-203ENST00000554658 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
CIPC-203ENST00000554658 CEP164Q9UPV0 1460 aa27.27■■□□□ 1.96
CIPC-203ENST00000554658 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
CIPC-203ENST00000554658 FANCD2Q9BXW9 1451 aa27.15■■□□□ 1.94
CIPC-203ENST00000554658 WIZO95785 1651 aa27.14■■□□□ 1.93
CIPC-203ENST00000554658 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
CIPC-203ENST00000554658 RIMBP3BA6NNM3 1639 aa27.08■■□□□ 1.93
CIPC-203ENST00000554658 RIMBP3Q9UFD9 1639 aa27.08■■□□□ 1.93
CIPC-203ENST00000554658 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
CIPC-203ENST00000554658 CFTRP13569 1480 aa26.98■■□□□ 1.91
CIPC-203ENST00000554658 ARHGEF11O15085 1522 aa26.89■■□□□ 1.89
CIPC-203ENST00000554658 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
CIPC-203ENST00000554658 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
CIPC-203ENST00000554658 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
CIPC-203ENST00000554658 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
CIPC-203ENST00000554658 CYB5RLQ6IPT4 315 aa26.66■■□□□ 1.86
CIPC-203ENST00000554658 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.86
CIPC-203ENST00000554658 TRHP20396 242 aaPredicted RBP26.63■■□□□ 1.85
CIPC-203ENST00000554658 CHD1O14646 1710 aa26.62■■□□□ 1.85
CIPC-203ENST00000554658 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
CIPC-203ENST00000554658 TOPBP1Q92547 1522 aa26.57■■□□□ 1.84
CIPC-203ENST00000554658 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
CIPC-203ENST00000554658 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
CIPC-203ENST00000554658 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
CIPC-203ENST00000554658 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
CIPC-203ENST00000554658 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.822e-11■■■■□ 26
CIPC-203ENST00000554658 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
CIPC-203ENST00000554658 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
CIPC-203ENST00000554658 FBLN2P98095 1184 aa26.37■■□□□ 1.81
CIPC-203ENST00000554658 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
CIPC-203ENST00000554658 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
CIPC-203ENST00000554658 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
CIPC-203ENST00000554658 SNAPC4Q5SXM2 1469 aa26.16■■□□□ 1.78
CIPC-203ENST00000554658 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
CIPC-203ENST00000554658 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
CIPC-203ENST00000554658 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
CIPC-203ENST00000554658 SOGA1O94964 1423 aa26.08■■□□□ 1.77
CIPC-203ENST00000554658 MAGI1Q96QZ7 1491 aaPredicted RBP26.05■■□□□ 1.76
CIPC-203ENST00000554658 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
CIPC-203ENST00000554658 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
CIPC-203ENST00000554658 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
CIPC-203ENST00000554658 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
CIPC-203ENST00000554658 GRIN2BQ13224 1484 aa25.97■■□□□ 1.75
CIPC-203ENST00000554658 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
CIPC-203ENST00000554658 CUX1P39880 1505 aa25.85■■□□□ 1.73
CIPC-203ENST00000554658 ERCC6L2Q5T890 1561 aa25.76■■□□□ 1.71
CIPC-203ENST00000554658 ABCA5Q8WWZ7 1642 aa25.72■■□□□ 1.71
CIPC-203ENST00000554658 KIF13AQ9H1H9 1805 aa25.69■■□□□ 1.7
CIPC-203ENST00000554658 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
CIPC-203ENST00000554658 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
CIPC-203ENST00000554658 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
CIPC-203ENST00000554658 ADAMTS12P58397 1594 aa25.59■■□□□ 1.69
CIPC-203ENST00000554658 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
CIPC-203ENST00000554658 NUP160Q12769 1436 aa25.56■■□□□ 1.68
CIPC-203ENST00000554658 FHAD1B1AJZ9 1412 aa25.42■■□□□ 1.66
CIPC-203ENST00000554658 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
CIPC-203ENST00000554658 ABCC10Q5T3U5 1492 aa25.38■■□□□ 1.65
CIPC-203ENST00000554658 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
CIPC-203ENST00000554658 FAM69CQ0P6D2 419 aa25.35■■□□□ 1.65
CIPC-203ENST00000554658 DIP2BQ9P265 1576 aa25.34■■□□□ 1.65
CIPC-203ENST00000554658 KDM6BO15054 1643 aa25.34■■□□□ 1.65
CIPC-203ENST00000554658 MAPKBP1O60336 1514 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms