RNA–Protein interactions for RNA: ENST00000554275.1

NEMF-204, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 873 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-204ENST00000554275 DOK7Q18PE1 504 aa13.47□□□□□ -0.25
NEMF-204ENST00000554275 EMP3P54852 163 aa13.46□□□□□ -0.25
NEMF-204ENST00000554275 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
NEMF-204ENST00000554275 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
NEMF-204ENST00000554275 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
NEMF-204ENST00000554275 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
NEMF-204ENST00000554275 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
NEMF-204ENST00000554275 KIF3CO14782 793 aa13.42□□□□□ -0.26
NEMF-204ENST00000554275 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
NEMF-204ENST00000554275 C2orf72A6NCS6 295 aa13.4□□□□□ -0.26
NEMF-204ENST00000554275 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
NEMF-204ENST00000554275 HS3ST6Q96QI5 342 aa13.38□□□□□ -0.27
NEMF-204ENST00000554275 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
NEMF-204ENST00000554275 GPR153Q6NV75 609 aa13.35□□□□□ -0.27
NEMF-204ENST00000554275 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
NEMF-204ENST00000554275 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
NEMF-204ENST00000554275 ARSIQ5FYB1 569 aa13.3□□□□□ -0.28
NEMF-204ENST00000554275 DCAF8L2P0C7V8 631 aa13.28□□□□□ -0.28
NEMF-204ENST00000554275 ERBB3P21860 1342 aa13.28□□□□□ -0.28
NEMF-204ENST00000554275 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
NEMF-204ENST00000554275 KRTAP3-3Q9BYR6 98 aa13.26□□□□□ -0.29
NEMF-204ENST00000554275 KRTAP3-2Q9BYR7 98 aa13.26□□□□□ -0.29
NEMF-204ENST00000554275 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
NEMF-204ENST00000554275 RYDENQ9NUL5 291 aaKnown RBP13.24□□□□□ -0.29
NEMF-204ENST00000554275 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
NEMF-204ENST00000554275 SLC34A2O95436 690 aa13.22□□□□□ -0.29
NEMF-204ENST00000554275 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
NEMF-204ENST00000554275 GPHNQ9NQX3 736 aaPredicted RBP13.21□□□□□ -0.29
NEMF-204ENST00000554275 FOXK1P85037 733 aa13.19□□□□□ -0.3
NEMF-204ENST00000554275 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
NEMF-204ENST00000554275 DSG2Q14126 1118 aa13.17□□□□□ -0.3
NEMF-204ENST00000554275 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
NEMF-204ENST00000554275 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
NEMF-204ENST00000554275 NUDT7P0C024 238 aa13.15□□□□□ -0.3
NEMF-204ENST00000554275 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
NEMF-204ENST00000554275 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
NEMF-204ENST00000554275 CRISPLD2Q9H0B8 497 aa13.12□□□□□ -0.31
NEMF-204ENST00000554275 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
NEMF-204ENST00000554275 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
NEMF-204ENST00000554275 KDM4FA0A1W2PPD8 638 aa13.08□□□□□ -0.32
NEMF-204ENST00000554275 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
NEMF-204ENST00000554275 PDE4AP27815 886 aa13.04□□□□□ -0.32
NEMF-204ENST00000554275 PPP1R15BQ5SWA1 713 aa13.02□□□□□ -0.33
NEMF-204ENST00000554275 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
NEMF-204ENST00000554275 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
NEMF-204ENST00000554275 OXER1Q8TDS5 423 aa12.99□□□□□ -0.33
NEMF-204ENST00000554275 LARP6Q9BRS8 491 aaKnown RBP12.99□□□□□ -0.33
NEMF-204ENST00000554275 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
NEMF-204ENST00000554275 TBC1D12O60347 775 aa12.97□□□□□ -0.33
NEMF-204ENST00000554275 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
NEMF-204ENST00000554275 MFSD10Q14728 455 aa12.94□□□□□ -0.34
NEMF-204ENST00000554275 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
NEMF-204ENST00000554275 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
NEMF-204ENST00000554275 ANKRD13DQ6ZTN6 518 aa12.92□□□□□ -0.34
NEMF-204ENST00000554275 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
NEMF-204ENST00000554275 PBX2P40425 430 aa12.91□□□□□ -0.34
NEMF-204ENST00000554275 LSM11P83369 360 aaKnown RBP eCLIP12.91□□□□□ -0.34
NEMF-204ENST00000554275 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
NEMF-204ENST00000554275 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
NEMF-204ENST00000554275 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
NEMF-204ENST00000554275 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
NEMF-204ENST00000554275 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
NEMF-204ENST00000554275 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
NEMF-204ENST00000554275 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
NEMF-204ENST00000554275 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
NEMF-204ENST00000554275 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
NEMF-204ENST00000554275 RNF166Q96A37 237 aaPredicted RBP12.82□□□□□ -0.36
NEMF-204ENST00000554275 EVI5O60447 810 aa12.81□□□□□ -0.36
NEMF-204ENST00000554275 PSEN2P49810 448 aa12.81□□□□□ -0.36
NEMF-204ENST00000554275 DMRTA1Q5VZB9 504 aa12.8□□□□□ -0.36
NEMF-204ENST00000554275 PTGER2P43116 358 aa12.79□□□□□ -0.36
NEMF-204ENST00000554275 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
NEMF-204ENST00000554275 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
NEMF-204ENST00000554275 FOSBP53539 338 aa12.77□□□□□ -0.37
NEMF-204ENST00000554275 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
NEMF-204ENST00000554275 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
NEMF-204ENST00000554275 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
NEMF-204ENST00000554275 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
NEMF-204ENST00000554275 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
NEMF-204ENST00000554275 TK2O00142 265 aa12.72□□□□□ -0.37
NEMF-204ENST00000554275 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
NEMF-204ENST00000554275 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
NEMF-204ENST00000554275 HRO43593 1189 aa12.69□□□□□ -0.38
NEMF-204ENST00000554275 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
NEMF-204ENST00000554275 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
NEMF-204ENST00000554275 DPYSL4O14531 572 aa12.67□□□□□ -0.38
NEMF-204ENST00000554275 PCDHGA10Q9Y5H3 936 aa12.66□□□□□ -0.38
NEMF-204ENST00000554275 KCNH8Q96L42 1107 aa12.65□□□□□ -0.38
NEMF-204ENST00000554275 PTPREP23469 700 aa12.64□□□□□ -0.39
NEMF-204ENST00000554275 VPS9D1Q9Y2B5 631 aa12.64□□□□□ -0.39
NEMF-204ENST00000554275 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
NEMF-204ENST00000554275 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
NEMF-204ENST00000554275 PHF14O94880 888 aa12.59□□□□□ -0.39
NEMF-204ENST00000554275 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
NEMF-204ENST00000554275 TYW1BQ6NUM6 668 aa12.57□□□□□ -0.4
NEMF-204ENST00000554275 E2F4Q16254 413 aa12.56□□□□□ -0.4
NEMF-204ENST00000554275 BHMG1C9JSJ3 638 aaPredicted RBP12.55□□□□□ -0.4
NEMF-204ENST00000554275 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
NEMF-204ENST00000554275 DDX12PQ92771 950 aa12.54□□□□□ -0.4
NEMF-204ENST00000554275 WDR70Q9NW82 654 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms