RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 TMEM92Q6UXU6 159 aa10.87□□□□□ -0.67
STRN3-204ENST00000554124 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
STRN3-204ENST00000554124 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
STRN3-204ENST00000554124 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
STRN3-204ENST00000554124 HOXB1P14653 301 aaPredicted RBP10.81□□□□□ -0.68
STRN3-204ENST00000554124 FAM205CA6NFA0 338 aa10.8□□□□□ -0.68
STRN3-204ENST00000554124 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
STRN3-204ENST00000554124 HS3ST6Q96QI5 342 aa10.78□□□□□ -0.68
STRN3-204ENST00000554124 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
STRN3-204ENST00000554124 C2orf72A6NCS6 295 aa10.77□□□□□ -0.69
STRN3-204ENST00000554124 PPP1R37O75864 691 aa10.76□□□□□ -0.69
STRN3-204ENST00000554124 ERBB3P21860 1342 aa10.76□□□□□ -0.69
STRN3-204ENST00000554124 KIF3CO14782 793 aa10.74□□□□□ -0.69
STRN3-204ENST00000554124 GPR153Q6NV75 609 aa10.7□□□□□ -0.7
STRN3-204ENST00000554124 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
STRN3-204ENST00000554124 ARSIQ5FYB1 569 aa10.68□□□□□ -0.7
STRN3-204ENST00000554124 POTEB3A0JP26 581 aa10.67□□□□□ -0.7
STRN3-204ENST00000554124 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
STRN3-204ENST00000554124 POTEBQ6S5H4 581 aa10.67□□□□□ -0.7
STRN3-204ENST00000554124 SLC34A2O95436 690 aa10.65□□□□□ -0.7
STRN3-204ENST00000554124 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
STRN3-204ENST00000554124 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
STRN3-204ENST00000554124 FOXK1P85037 733 aa10.62□□□□□ -0.71
STRN3-204ENST00000554124 ZNF316A6NFI3 1004 aaPredicted RBP10.61□□□□□ -0.71
STRN3-204ENST00000554124 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
STRN3-204ENST00000554124 KHSRPQ92945 711 aaKnown RBP eCLIP10.61□□□□□ -0.719e-9■■■□□ 18.8
STRN3-204ENST00000554124 KRTAP3-3Q9BYR6 98 aa10.61□□□□□ -0.71
STRN3-204ENST00000554124 KRTAP3-2Q9BYR7 98 aa10.61□□□□□ -0.71
STRN3-204ENST00000554124 PCDHGA4Q9Y5G9 962 aa10.61□□□□□ -0.71
STRN3-204ENST00000554124 PLPP6Q8IY26 295 aa10.6□□□□□ -0.71
STRN3-204ENST00000554124 NUDT7P0C024 238 aa10.59□□□□□ -0.71
STRN3-204ENST00000554124 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
STRN3-204ENST00000554124 GTPBP6O43824 516 aaPredicted RBP10.58□□□□□ -0.72
STRN3-204ENST00000554124 TBC1D12O60347 775 aa10.57□□□□□ -0.72
STRN3-204ENST00000554124 DSG2Q14126 1118 aa10.57□□□□□ -0.72
STRN3-204ENST00000554124 PDE4AP27815 886 aa10.55□□□□□ -0.72
STRN3-204ENST00000554124 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
STRN3-204ENST00000554124 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
STRN3-204ENST00000554124 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
STRN3-204ENST00000554124 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
STRN3-204ENST00000554124 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
STRN3-204ENST00000554124 PPP1R15BQ5SWA1 713 aa10.51□□□□□ -0.73
STRN3-204ENST00000554124 BBXQ8WY36 941 aaPredicted RBP10.49□□□□□ -0.73
STRN3-204ENST00000554124 PBX2P40425 430 aa10.48□□□□□ -0.73
STRN3-204ENST00000554124 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
STRN3-204ENST00000554124 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.73
STRN3-204ENST00000554124 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.73
STRN3-204ENST00000554124 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.73
STRN3-204ENST00000554124 PTGER2P43116 358 aa10.45□□□□□ -0.74
STRN3-204ENST00000554124 UPF1Q92900 1129 aaKnown RBP eCLIP10.45□□□□□ -0.74
STRN3-204ENST00000554124 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.45□□□□□ -0.74
STRN3-204ENST00000554124 ANKRD13DQ6ZTN6 518 aa10.44□□□□□ -0.74
STRN3-204ENST00000554124 PPP4R3BQ5MIZ7 849 aa10.43□□□□□ -0.74
STRN3-204ENST00000554124 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
STRN3-204ENST00000554124 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.74
STRN3-204ENST00000554124 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
STRN3-204ENST00000554124 MFSD10Q14728 455 aa10.4□□□□□ -0.74
STRN3-204ENST00000554124 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
STRN3-204ENST00000554124 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
STRN3-204ENST00000554124 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
STRN3-204ENST00000554124 RNF166Q96A37 237 aaPredicted RBP10.39□□□□□ -0.75
STRN3-204ENST00000554124 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
STRN3-204ENST00000554124 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
STRN3-204ENST00000554124 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
STRN3-204ENST00000554124 CADPS2Q86UW7 1296 aa10.34□□□□□ -0.75
STRN3-204ENST00000554124 EVI5O60447 810 aa10.33□□□□□ -0.76
STRN3-204ENST00000554124 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
STRN3-204ENST00000554124 ZNF454Q8N9F8 522 aa10.33□□□□□ -0.76
STRN3-204ENST00000554124 ADGRD1Q6QNK2 874 aa10.3□□□□□ -0.76
STRN3-204ENST00000554124 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
STRN3-204ENST00000554124 TK2O00142 265 aa10.29□□□□□ -0.76
STRN3-204ENST00000554124 PSEN2P49810 448 aa10.29□□□□□ -0.76
STRN3-204ENST00000554124 PAXIP1Q6ZW49 1069 aaPredicted RBP10.29□□□□□ -0.76
STRN3-204ENST00000554124 JPH4Q96JJ6 628 aa10.29□□□□□ -0.76
STRN3-204ENST00000554124 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
STRN3-204ENST00000554124 ANO8Q9HCE9 1232 aaPredicted RBP10.29□□□□□ -0.76
STRN3-204ENST00000554124 FOSBP53539 338 aa10.28□□□□□ -0.76
STRN3-204ENST00000554124 STAC3Q96MF2 364 aa10.27□□□□□ -0.77
STRN3-204ENST00000554124 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
STRN3-204ENST00000554124 EMILIN3Q9NT22 766 aa10.27□□□□□ -0.77
STRN3-204ENST00000554124 PTPREP23469 700 aa10.25□□□□□ -0.77
STRN3-204ENST00000554124 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
STRN3-204ENST00000554124 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
STRN3-204ENST00000554124 CAMK2BQ13554 666 aa10.24□□□□□ -0.77
STRN3-204ENST00000554124 WDR70Q9NW82 654 aa10.22□□□□□ -0.77
STRN3-204ENST00000554124 DPYSL4O14531 572 aa10.19□□□□□ -0.78
STRN3-204ENST00000554124 FBXW7Q969H0 707 aa10.19□□□□□ -0.78
STRN3-204ENST00000554124 HRO43593 1189 aa10.18□□□□□ -0.78
STRN3-204ENST00000554124 PHF14O94880 888 aa10.18□□□□□ -0.78
STRN3-204ENST00000554124 SLC4A5Q9BY07 1137 aa10.18□□□□□ -0.78
STRN3-204ENST00000554124 ADAM33Q9BZ11 813 aa10.18□□□□□ -0.78
STRN3-204ENST00000554124 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
STRN3-204ENST00000554124 VPS9D1Q9Y2B5 631 aa10.17□□□□□ -0.78
STRN3-204ENST00000554124 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
STRN3-204ENST00000554124 E2F4Q16254 413 aa10.15□□□□□ -0.78
STRN3-204ENST00000554124 EPAS1Q99814 870 aa10.15□□□□□ -0.78
STRN3-204ENST00000554124 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
STRN3-204ENST00000554124 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
STRN3-204ENST00000554124 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
STRN3-204ENST00000554124 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms