RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 YEATS2Q9ULM3 1422 aa11.18□□□□□ -0.62
GPHN-206ENST00000553936 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
GPHN-206ENST00000553936 TTC37Q6PGP7 1564 aa11.17□□□□□ -0.62
GPHN-206ENST00000553936 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
GPHN-206ENST00000553936 NUP153P49790 1475 aaKnown RBP11.17□□□□□ -0.62
GPHN-206ENST00000553936 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
GPHN-206ENST00000553936 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
GPHN-206ENST00000553936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
GPHN-206ENST00000553936 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
GPHN-206ENST00000553936 C9orf84Q5VXU9 1444 aa11.13□□□□□ -0.63
GPHN-206ENST00000553936 ATP10AO60312 1499 aa11.12□□□□□ -0.63
GPHN-206ENST00000553936 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
GPHN-206ENST00000553936 SCAPERQ9BY12 1400 aa11.12□□□□□ -0.63
GPHN-206ENST00000553936 ARHGEF12Q9NZN5 1544 aa11.12□□□□□ -0.63
GPHN-206ENST00000553936 HECW1Q76N89 1606 aa11.12□□□□□ -0.63
GPHN-206ENST00000553936 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
GPHN-206ENST00000553936 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
GPHN-206ENST00000553936 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
GPHN-206ENST00000553936 PTPRTO14522 1441 aa11.09□□□□□ -0.63
GPHN-206ENST00000553936 PLCH2O75038 1416 aa11.09□□□□□ -0.63
GPHN-206ENST00000553936 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
GPHN-206ENST00000553936 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
GPHN-206ENST00000553936 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
GPHN-206ENST00000553936 IQSEC2Q5JU85 1478 aa11.08□□□□□ -0.64
GPHN-206ENST00000553936 SIGLEC1Q9BZZ2 1709 aa11.07□□□□□ -0.64
GPHN-206ENST00000553936 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
GPHN-206ENST00000553936 ZNF518AQ6AHZ1 1483 aa11.06□□□□□ -0.64
GPHN-206ENST00000553936 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
GPHN-206ENST00000553936 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
GPHN-206ENST00000553936 EEA1Q15075 1411 aa11.04□□□□□ -0.64
GPHN-206ENST00000553936 TRAPPC8Q9Y2L5 1435 aa11.02□□□□□ -0.64
GPHN-206ENST00000553936 MYO5CQ9NQX4 1742 aa11.01□□□□□ -0.65
GPHN-206ENST00000553936 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
GPHN-206ENST00000553936 ATP1B4Q9UN42 357 aaPredicted RBP11.01□□□□□ -0.65
GPHN-206ENST00000553936 CLIP1P30622 1438 aa11.01□□□□□ -0.65
GPHN-206ENST00000553936 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
GPHN-206ENST00000553936 ARHGAP5Q13017 1502 aa11□□□□□ -0.65
GPHN-206ENST00000553936 REREQ9P2R6 1566 aa11□□□□□ -0.65
GPHN-206ENST00000553936 LTBP4Q8N2S1 1624 aa11□□□□□ -0.65
GPHN-206ENST00000553936 AFAP1Q8N556 730 aa11□□□□□ -0.65
GPHN-206ENST00000553936 FMN1Q68DA7 1419 aa11□□□□□ -0.65
GPHN-206ENST00000553936 KDM5CP41229 1560 aa10.99□□□□□ -0.65
GPHN-206ENST00000553936 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
GPHN-206ENST00000553936 KIF14Q15058 1648 aa10.98□□□□□ -0.65
GPHN-206ENST00000553936 MLH3Q9UHC1 1453 aa10.98□□□□□ -0.65
GPHN-206ENST00000553936 AGLP35573 1532 aa10.98□□□□□ -0.65
GPHN-206ENST00000553936 C3P01024 1663 aa10.98□□□□□ -0.65
GPHN-206ENST00000553936 UBAP1LF5GYI3 381 aa10.97□□□□□ -0.65
GPHN-206ENST00000553936 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
GPHN-206ENST00000553936 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
GPHN-206ENST00000553936 NPATQ14207 1427 aa10.95□□□□□ -0.66
GPHN-206ENST00000553936 PKD2Q13563 968 aa10.94□□□□□ -0.66
GPHN-206ENST00000553936 CAMSAP1Q5T5Y3 1602 aa10.94□□□□□ -0.66
GPHN-206ENST00000553936 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
GPHN-206ENST00000553936 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
GPHN-206ENST00000553936 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
GPHN-206ENST00000553936 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
GPHN-206ENST00000553936 ZMYM3Q14202 1370 aa10.9□□□□□ -0.66
GPHN-206ENST00000553936 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
GPHN-206ENST00000553936 MROH2AA6NES4 1674 aa10.9□□□□□ -0.66
GPHN-206ENST00000553936 TOM1O60784 492 aa10.9□□□□□ -0.66
GPHN-206ENST00000553936 UBTFP17480 764 aaKnown RBP10.9□□□□□ -0.66
GPHN-206ENST00000553936 ABCC1P33527 1531 aa10.89□□□□□ -0.67
GPHN-206ENST00000553936 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
GPHN-206ENST00000553936 PREX2Q70Z35 1606 aa10.87□□□□□ -0.67
GPHN-206ENST00000553936 CDC42BPBQ9Y5S2 1711 aa10.87□□□□□ -0.67
GPHN-206ENST00000553936 ITSN2Q9NZM3 1697 aa10.86□□□□□ -0.67
GPHN-206ENST00000553936 TCOF1Q13428 1488 aaKnown RBP10.86□□□□□ -0.67
GPHN-206ENST00000553936 CCDC18Q5T9S5 1454 aa10.86□□□□□ -0.67
GPHN-206ENST00000553936 SPAG9O60271 1321 aaKnown RBP10.85□□□□□ -0.67
GPHN-206ENST00000553936 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
GPHN-206ENST00000553936 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
GPHN-206ENST00000553936 ARHGAP35Q9NRY4 1499 aa10.85□□□□□ -0.67
GPHN-206ENST00000553936 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
GPHN-206ENST00000553936 CEP170BQ9Y4F5 1589 aaPredicted RBP10.85□□□□□ -0.67
GPHN-206ENST00000553936 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
GPHN-206ENST00000553936 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
GPHN-206ENST00000553936 SUPT6HQ7KZ85 1726 aaKnown RBP10.84□□□□□ -0.67
GPHN-206ENST00000553936 HSPA1LP34931 641 aa10.84□□□□□ -0.67
GPHN-206ENST00000553936 ZNF777Q9ULD5 760 aaPredicted RBP10.84□□□□□ -0.67
GPHN-206ENST00000553936 CPS1P31327 1500 aa10.84□□□□□ -0.67
GPHN-206ENST00000553936 PTPRKQ15262 1439 aa10.83□□□□□ -0.68
GPHN-206ENST00000553936 SAMD9LQ8IVG5 1584 aa10.82□□□□□ -0.68
GPHN-206ENST00000553936 GGT6Q6P531 493 aa10.82□□□□□ -0.68
GPHN-206ENST00000553936 CLTCQ00610 1675 aaKnown RBP10.81□□□□□ -0.68
GPHN-206ENST00000553936 A2MP01023 1474 aa10.81□□□□□ -0.68
GPHN-206ENST00000553936 PLEKHH2Q8IVE3 1493 aa10.81□□□□□ -0.68
GPHN-206ENST00000553936 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
GPHN-206ENST00000553936 A2ML1A8K2U0 1454 aa10.8□□□□□ -0.68
GPHN-206ENST00000553936 ATP7AQ04656 1500 aa10.79□□□□□ -0.68
GPHN-206ENST00000553936 SYCP2Q9BX26 1530 aa10.79□□□□□ -0.68
GPHN-206ENST00000553936 CASKIN1Q8WXD9 1431 aa10.79□□□□□ -0.68
GPHN-206ENST00000553936 KIAA1107Q9UPP5 1409 aa10.79□□□□□ -0.68
GPHN-206ENST00000553936 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
GPHN-206ENST00000553936 HNRNPMP52272 730 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■■■■■ 30.7
GPHN-206ENST00000553936 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
GPHN-206ENST00000553936 CFDP1Q9UEE9 299 aaPredicted RBP10.78□□□□□ -0.68
GPHN-206ENST00000553936 SHANK2Q9UPX8 1470 aa10.78□□□□□ -0.68
GPHN-206ENST00000553936 CDC42BPAQ5VT25 1732 aa10.78□□□□□ -0.68
GPHN-206ENST00000553936 LRRIQ1Q96JM4 1722 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms