RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 IRX6P78412 446 aaPredicted RBP11.95□□□□□ -0.5
CCNK-203ENST00000553865 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
CCNK-203ENST00000553865 DNTTIP2Q5QJE6 756 aaKnown RBP11.94□□□□□ -0.5
CCNK-203ENST00000553865 KIAA0586Q9BVV6 1533 aa11.94□□□□□ -0.5
CCNK-203ENST00000553865 MYH16Q9H6N6 1097 aa11.94□□□□□ -0.5
CCNK-203ENST00000553865 CARD11Q9BXL7 1154 aa11.94□□□□□ -0.5
CCNK-203ENST00000553865 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
CCNK-203ENST00000553865 EHBP1L1Q8N3D4 1523 aa11.93□□□□□ -0.5
CCNK-203ENST00000553865 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
CCNK-203ENST00000553865 URB2Q14146 1524 aaKnown RBP11.92□□□□□ -0.5
CCNK-203ENST00000553865 LRRC9Q6ZRR7 1453 aa11.92□□□□□ -0.5
CCNK-203ENST00000553865 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
CCNK-203ENST00000553865 SYNJ2O15056 1496 aa11.91□□□□□ -0.5
CCNK-203ENST00000553865 CCER2I3L3R5 266 aa11.91□□□□□ -0.5
CCNK-203ENST00000553865 IQGAP2Q13576 1575 aa11.91□□□□□ -0.5
CCNK-203ENST00000553865 RGL3Q3MIN7 710 aa11.9□□□□□ -0.5
CCNK-203ENST00000553865 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
CCNK-203ENST00000553865 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
CCNK-203ENST00000553865 MYOM3Q5VTT5 1437 aa11.89□□□□□ -0.51
CCNK-203ENST00000553865 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
CCNK-203ENST00000553865 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
CCNK-203ENST00000553865 ZRSR1Q15695 479 aaKnown RBP11.88□□□□□ -0.51
CCNK-203ENST00000553865 PLPPR3Q6T4P5 718 aa11.88□□□□□ -0.51
CCNK-203ENST00000553865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCNK-203ENST00000553865 PPP4R2Q9NY27 417 aa11.87□□□□□ -0.51
CCNK-203ENST00000553865 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
CCNK-203ENST00000553865 RAB3GAP2Q9H2M9 1393 aa11.86□□□□□ -0.51
CCNK-203ENST00000553865 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
CCNK-203ENST00000553865 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
CCNK-203ENST00000553865 MIA2Q96PC5 1412 aa11.85□□□□□ -0.51
CCNK-203ENST00000553865 TIAM1Q13009 1591 aa11.85□□□□□ -0.51
CCNK-203ENST00000553865 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
CCNK-203ENST00000553865 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
CCNK-203ENST00000553865 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
CCNK-203ENST00000553865 PLEKHH2Q8IVE3 1493 aa11.84□□□□□ -0.51
CCNK-203ENST00000553865 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
CCNK-203ENST00000553865 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
CCNK-203ENST00000553865 WDR62O43379 1518 aa11.81□□□□□ -0.52
CCNK-203ENST00000553865 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
CCNK-203ENST00000553865 PRG4Q92954 1404 aaPredicted RBP11.8□□□□□ -0.52
CCNK-203ENST00000553865 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
CCNK-203ENST00000553865 GOLGA6L6A8MZA4 724 aa11.79□□□□□ -0.52
CCNK-203ENST00000553865 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
CCNK-203ENST00000553865 TMF1P82094 1093 aa11.79□□□□□ -0.52
CCNK-203ENST00000553865 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
CCNK-203ENST00000553865 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
CCNK-203ENST00000553865 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
CCNK-203ENST00000553865 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
CCNK-203ENST00000553865 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.52
CCNK-203ENST00000553865 NRDCO43847 1150 aa11.77□□□□□ -0.53
CCNK-203ENST00000553865 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
CCNK-203ENST00000553865 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
CCNK-203ENST00000553865 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
CCNK-203ENST00000553865 MPHOSPH9Q99550 1183 aa11.75□□□□□ -0.53
CCNK-203ENST00000553865 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
CCNK-203ENST00000553865 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
CCNK-203ENST00000553865 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
CCNK-203ENST00000553865 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
CCNK-203ENST00000553865 NUP155O75694 1391 aa11.74□□□□□ -0.53
CCNK-203ENST00000553865 PKD2Q13563 968 aa11.74□□□□□ -0.53
CCNK-203ENST00000553865 C14orf37Q86TY3 774 aa11.74□□□□□ -0.53
CCNK-203ENST00000553865 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
CCNK-203ENST00000553865 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
CCNK-203ENST00000553865 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
CCNK-203ENST00000553865 PCF11O94913 1555 aaKnown RBP11.73□□□□□ -0.53
CCNK-203ENST00000553865 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
CCNK-203ENST00000553865 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
CCNK-203ENST00000553865 DHX57Q6P158 1386 aaKnown RBP11.72□□□□□ -0.53
CCNK-203ENST00000553865 FTSJ3Q8IY81 847 aaKnown RBP11.71□□□□□ -0.53
CCNK-203ENST00000553865 MS4A1P11836 297 aa11.71□□□□□ -0.53
CCNK-203ENST00000553865 PHLDB1Q86UU1 1377 aa11.71□□□□□ -0.53
CCNK-203ENST00000553865 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.54
CCNK-203ENST00000553865 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
CCNK-203ENST00000553865 UGGT2Q9NYU1 1516 aa11.7□□□□□ -0.54
CCNK-203ENST00000553865 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
CCNK-203ENST00000553865 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
CCNK-203ENST00000553865 A0A0G2JS52 829 aa11.7□□□□□ -0.54
CCNK-203ENST00000553865 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
CCNK-203ENST00000553865 PNNQ9H307 717 aaKnown RBP11.69□□□□□ -0.54
CCNK-203ENST00000553865 TNNT3P45378 269 aaPredicted RBP11.69□□□□□ -0.54
CCNK-203ENST00000553865 DNAJC5BQ9UF47 199 aa11.69□□□□□ -0.54
CCNK-203ENST00000553865 RALBP1Q15311 655 aa11.68□□□□□ -0.54
CCNK-203ENST00000553865 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
CCNK-203ENST00000553865 MSNP26038 577 aaKnown RBP11.68□□□□□ -0.54
CCNK-203ENST00000553865 POGKQ9P215 609 aa11.68□□□□□ -0.54
CCNK-203ENST00000553865 KIF14Q15058 1648 aa11.68□□□□□ -0.54
CCNK-203ENST00000553865 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
CCNK-203ENST00000553865 L1TD1Q5T7N2 865 aaKnown RBP11.68□□□□□ -0.54
CCNK-203ENST00000553865 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
CCNK-203ENST00000553865 NOP58Q9Y2X3 529 aaKnown RBP11.68□□□□□ -0.54
CCNK-203ENST00000553865 PBRM1Q86U86 1689 aa11.67□□□□□ -0.54
CCNK-203ENST00000553865 ARHGAP5Q13017 1502 aa11.67□□□□□ -0.54
CCNK-203ENST00000553865 ARID4BQ4LE39 1312 aaPredicted RBP11.66□□□□□ -0.54
CCNK-203ENST00000553865 HNRNPMP52272 730 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCNK-203ENST00000553865 FOXD1Q16676 465 aa11.66□□□□□ -0.54
CCNK-203ENST00000553865 ROCK2O75116 1388 aaKnown RBP11.66□□□□□ -0.54
CCNK-203ENST00000553865 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
CCNK-203ENST00000553865 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
CCNK-203ENST00000553865 HFM1A2PYH4 1435 aa11.65□□□□□ -0.54
CCNK-203ENST00000553865 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms