RNA–Protein interactions for RNA: ENST00000553565.1

SNW1-202, Transcript of SNW domain containing 1, humanhuman

TSL 2

Gene SNW1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNW1-202ENST00000553565 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
SNW1-202ENST00000553565 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
SNW1-202ENST00000553565 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
SNW1-202ENST00000553565 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
SNW1-202ENST00000553565 KIF3CO14782 793 aa10.04□□□□□ -0.8
SNW1-202ENST00000553565 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
SNW1-202ENST00000553565 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
SNW1-202ENST00000553565 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
SNW1-202ENST00000553565 SPNS2Q8IVW8 549 aa10.02□□□□□ -0.81
SNW1-202ENST00000553565 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
SNW1-202ENST00000553565 KHSRPQ92945 711 aaKnown RBP eCLIP10□□□□□ -0.81
SNW1-202ENST00000553565 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
SNW1-202ENST00000553565 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
SNW1-202ENST00000553565 MMRN1Q13201 1228 aa9.97□□□□□ -0.81
SNW1-202ENST00000553565 ARSIQ5FYB1 569 aa9.97□□□□□ -0.81
SNW1-202ENST00000553565 ERBB3P21860 1342 aa9.96□□□□□ -0.82
SNW1-202ENST00000553565 CHGAP10645 457 aaKnown RBP9.95□□□□□ -0.82
SNW1-202ENST00000553565 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
SNW1-202ENST00000553565 ZSWIM6Q9HCJ5 1215 aa9.94□□□□□ -0.82
SNW1-202ENST00000553565 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
SNW1-202ENST00000553565 DNAJC5Q9H3Z4 198 aa9.88□□□□□ -0.83
SNW1-202ENST00000553565 NUDT7P0C024 238 aa9.86□□□□□ -0.83
SNW1-202ENST00000553565 ZNF687Q8N1G0 1237 aa9.86□□□□□ -0.83
SNW1-202ENST00000553565 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
SNW1-202ENST00000553565 ZNF316A6NFI3 1004 aaPredicted RBP9.84□□□□□ -0.83
SNW1-202ENST00000553565 SLC34A2O95436 690 aa9.84□□□□□ -0.83
SNW1-202ENST00000553565 PCDHGA4Q9Y5G9 962 aa9.84□□□□□ -0.83
SNW1-202ENST00000553565 KDM4FA0A1W2PPD8 638 aa9.82□□□□□ -0.84
SNW1-202ENST00000553565 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
SNW1-202ENST00000553565 DSG2Q14126 1118 aa9.81□□□□□ -0.84
SNW1-202ENST00000553565 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
SNW1-202ENST00000553565 GPHNQ9NQX3 736 aaPredicted RBP9.81□□□□□ -0.84
SNW1-202ENST00000553565 LHX6Q9UPM6 363 aa9.81□□□□□ -0.84
SNW1-202ENST00000553565 FOXK1P85037 733 aa9.8□□□□□ -0.84
SNW1-202ENST00000553565 GTPBP6O43824 516 aaPredicted RBP9.79□□□□□ -0.84
SNW1-202ENST00000553565 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
SNW1-202ENST00000553565 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
SNW1-202ENST00000553565 AXIN2Q9Y2T1 843 aa9.75□□□□□ -0.85
SNW1-202ENST00000553565 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
SNW1-202ENST00000553565 CRISPLD2Q9H0B8 497 aa9.74□□□□□ -0.85
SNW1-202ENST00000553565 DCAF8L2P0C7V8 631 aa9.72□□□□□ -0.85
SNW1-202ENST00000553565 RTN4Q9NQC3 1192 aaKnown RBP9.72□□□□□ -0.85
SNW1-202ENST00000553565 ANKRD13DQ6ZTN6 518 aa9.71□□□□□ -0.86
SNW1-202ENST00000553565 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
SNW1-202ENST00000553565 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
SNW1-202ENST00000553565 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
SNW1-202ENST00000553565 OXER1Q8TDS5 423 aa9.67□□□□□ -0.86
SNW1-202ENST00000553565 RNF166Q96A37 237 aaPredicted RBP9.66□□□□□ -0.86
SNW1-202ENST00000553565 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
SNW1-202ENST00000553565 UPF1Q92900 1129 aaKnown RBP eCLIP9.65□□□□□ -0.86
SNW1-202ENST00000553565 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
SNW1-202ENST00000553565 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
SNW1-202ENST00000553565 PSEN2P49810 448 aa9.62□□□□□ -0.87
SNW1-202ENST00000553565 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
SNW1-202ENST00000553565 PBX2P40425 430 aa9.61□□□□□ -0.87
SNW1-202ENST00000553565 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
SNW1-202ENST00000553565 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
SNW1-202ENST00000553565 PDE4AP27815 886 aa9.6□□□□□ -0.87
SNW1-202ENST00000553565 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
SNW1-202ENST00000553565 MFSD10Q14728 455 aa9.58□□□□□ -0.88
SNW1-202ENST00000553565 TBC1D12O60347 775 aa9.57□□□□□ -0.88
SNW1-202ENST00000553565 ADGRD1Q6QNK2 874 aa9.56□□□□□ -0.88
SNW1-202ENST00000553565 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
SNW1-202ENST00000553565 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
SNW1-202ENST00000553565 HRO43593 1189 aa9.54□□□□□ -0.88
SNW1-202ENST00000553565 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
SNW1-202ENST00000553565 PTGER2P43116 358 aa9.53□□□□□ -0.88
SNW1-202ENST00000553565 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
SNW1-202ENST00000553565 EVI5O60447 810 aa9.52□□□□□ -0.89
SNW1-202ENST00000553565 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
SNW1-202ENST00000553565 KCNK17Q96T54 332 aa9.52□□□□□ -0.89
SNW1-202ENST00000553565 FOSBP53539 338 aa9.51□□□□□ -0.89
SNW1-202ENST00000553565 TK2O00142 265 aa9.49□□□□□ -0.89
SNW1-202ENST00000553565 BBXQ8WY36 941 aaPredicted RBP9.49□□□□□ -0.89
SNW1-202ENST00000553565 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
SNW1-202ENST00000553565 ADAM33Q9BZ11 813 aa9.47□□□□□ -0.89
SNW1-202ENST00000553565 VPS9D1Q9Y2B5 631 aa9.46□□□□□ -0.9
SNW1-202ENST00000553565 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
SNW1-202ENST00000553565 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
SNW1-202ENST00000553565 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
SNW1-202ENST00000553565 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
SNW1-202ENST00000553565 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
SNW1-202ENST00000553565 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
SNW1-202ENST00000553565 ZBED2Q9BTP6 218 aa9.41□□□□□ -0.9
SNW1-202ENST00000553565 DPYSL4O14531 572 aa9.4□□□□□ -0.9
SNW1-202ENST00000553565 PTPREP23469 700 aa9.39□□□□□ -0.91
SNW1-202ENST00000553565 KCTD12Q96CX2 325 aaKnown RBP9.39□□□□□ -0.91
SNW1-202ENST00000553565 COL9A1P20849 921 aa9.38□□□□□ -0.91
SNW1-202ENST00000553565 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
SNW1-202ENST00000553565 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
SNW1-202ENST00000553565 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
SNW1-202ENST00000553565 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
SNW1-202ENST00000553565 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
SNW1-202ENST00000553565 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
SNW1-202ENST00000553565 PHF14O94880 888 aa9.33□□□□□ -0.92
SNW1-202ENST00000553565 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
SNW1-202ENST00000553565 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
SNW1-202ENST00000553565 DDX12PQ92771 950 aa9.31□□□□□ -0.92
SNW1-202ENST00000553565 PLA2G2EQ9NZK7 142 aa9.31□□□□□ -0.92
SNW1-202ENST00000553565 PTPN5P54829 565 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms