RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 RIMBP2O15034 1052 aa13.1□□□□□ -0.31
LETMD1-237ENST00000553175 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
LETMD1-237ENST00000553175 FBXO22Q8NEZ5 403 aa13.08□□□□□ -0.32
LETMD1-237ENST00000553175 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
LETMD1-237ENST00000553175 NLRP6P59044 892 aa13.02□□□□□ -0.33
LETMD1-237ENST00000553175 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-237ENST00000553175 ARSIQ5FYB1 569 aa13□□□□□ -0.33
LETMD1-237ENST00000553175 MFRPQ9BY79 579 aa13□□□□□ -0.33
LETMD1-237ENST00000553175 KIF3CO14782 793 aa12.96□□□□□ -0.33
LETMD1-237ENST00000553175 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.339e-6■■□□□ 14.4
LETMD1-237ENST00000553175 STK24Q9Y6E0 443 aa12.96□□□□□ -0.33
LETMD1-237ENST00000553175 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
LETMD1-237ENST00000553175 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
LETMD1-237ENST00000553175 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
LETMD1-237ENST00000553175 MYT1LQ9UL68 1186 aa12.9□□□□□ -0.34
LETMD1-237ENST00000553175 C2orf72A6NCS6 295 aa12.89□□□□□ -0.35
LETMD1-237ENST00000553175 STK25O00506 426 aa12.89□□□□□ -0.35
LETMD1-237ENST00000553175 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-237ENST00000553175 PKD2Q13563 968 aa12.87□□□□□ -0.35
LETMD1-237ENST00000553175 RGL2O15211 777 aa12.84□□□□□ -0.35
LETMD1-237ENST00000553175 SLC34A2O95436 690 aa12.81□□□□□ -0.36
LETMD1-237ENST00000553175 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
LETMD1-237ENST00000553175 NUDT7P0C024 238 aa12.8□□□□□ -0.36
LETMD1-237ENST00000553175 PTGER2P43116 358 aa12.8□□□□□ -0.36
LETMD1-237ENST00000553175 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
LETMD1-237ENST00000553175 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
LETMD1-237ENST00000553175 PPP1R37O75864 691 aa12.78□□□□□ -0.36
LETMD1-237ENST00000553175 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
LETMD1-237ENST00000553175 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
LETMD1-237ENST00000553175 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
LETMD1-237ENST00000553175 PBX2P40425 430 aa12.71□□□□□ -0.37
LETMD1-237ENST00000553175 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
LETMD1-237ENST00000553175 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
LETMD1-237ENST00000553175 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
LETMD1-237ENST00000553175 FOXK1P85037 733 aa12.6□□□□□ -0.39
LETMD1-237ENST00000553175 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
LETMD1-237ENST00000553175 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
LETMD1-237ENST00000553175 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
LETMD1-237ENST00000553175 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
LETMD1-237ENST00000553175 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
LETMD1-237ENST00000553175 HS6ST3Q8IZP7 471 aa12.55□□□□□ -0.4
LETMD1-237ENST00000553175 HRO43593 1189 aa12.53□□□□□ -0.4
LETMD1-237ENST00000553175 DSG2Q14126 1118 aa12.53□□□□□ -0.4
LETMD1-237ENST00000553175 DMRTA1Q5VZB9 504 aa12.53□□□□□ -0.4
LETMD1-237ENST00000553175 PSEN2P49810 448 aa12.51□□□□□ -0.41
LETMD1-237ENST00000553175 TK2O00142 265 aa12.5□□□□□ -0.41
LETMD1-237ENST00000553175 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
LETMD1-237ENST00000553175 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
LETMD1-237ENST00000553175 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
LETMD1-237ENST00000553175 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
LETMD1-237ENST00000553175 TBC1D12O60347 775 aa12.43□□□□□ -0.42
LETMD1-237ENST00000553175 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
LETMD1-237ENST00000553175 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
LETMD1-237ENST00000553175 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
LETMD1-237ENST00000553175 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
LETMD1-237ENST00000553175 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
LETMD1-237ENST00000553175 VPS9D1Q9Y2B5 631 aa12.35□□□□□ -0.43
LETMD1-237ENST00000553175 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
LETMD1-237ENST00000553175 KCTD12Q96CX2 325 aaKnown RBP12.33□□□□□ -0.44
LETMD1-237ENST00000553175 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
LETMD1-237ENST00000553175 PPP1R15BQ5SWA1 713 aa12.3□□□□□ -0.44
LETMD1-237ENST00000553175 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
LETMD1-237ENST00000553175 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
LETMD1-237ENST00000553175 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
LETMD1-237ENST00000553175 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-237ENST00000553175 FOSBP53539 338 aa12.29□□□□□ -0.44
LETMD1-237ENST00000553175 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
LETMD1-237ENST00000553175 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
LETMD1-237ENST00000553175 RYDENQ9NUL5 291 aaKnown RBP12.25□□□□□ -0.45
LETMD1-237ENST00000553175 PDE4AP27815 886 aa12.24□□□□□ -0.45
LETMD1-237ENST00000553175 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
LETMD1-237ENST00000553175 ZBED2Q9BTP6 218 aa12.23□□□□□ -0.45
LETMD1-237ENST00000553175 GTPBP6O43824 516 aaPredicted RBP12.22□□□□□ -0.45
LETMD1-237ENST00000553175 EVI5O60447 810 aa12.2□□□□□ -0.46
LETMD1-237ENST00000553175 PTPN5P54829 565 aa12.2□□□□□ -0.46
LETMD1-237ENST00000553175 PTPREP23469 700 aa12.19□□□□□ -0.46
LETMD1-237ENST00000553175 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
LETMD1-237ENST00000553175 ADAM33Q9BZ11 813 aa12.18□□□□□ -0.46
LETMD1-237ENST00000553175 THSD4Q6ZMP0 1018 aa12.17□□□□□ -0.46
LETMD1-237ENST00000553175 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
LETMD1-237ENST00000553175 ZDHHC16Q969W1 377 aa12.16□□□□□ -0.46
LETMD1-237ENST00000553175 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
LETMD1-237ENST00000553175 MFSD10Q14728 455 aa12.15□□□□□ -0.46
LETMD1-237ENST00000553175 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
LETMD1-237ENST00000553175 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
LETMD1-237ENST00000553175 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
LETMD1-237ENST00000553175 WNT2BQ93097 391 aa12.1□□□□□ -0.47
LETMD1-237ENST00000553175 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
LETMD1-237ENST00000553175 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
LETMD1-237ENST00000553175 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
LETMD1-237ENST00000553175 RGS20O76081 388 aa12.06□□□□□ -0.48
LETMD1-237ENST00000553175 COL9A1P20849 921 aa12.05□□□□□ -0.48
LETMD1-237ENST00000553175 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
LETMD1-237ENST00000553175 PPP1R3GB7ZBB8 358 aa12.04□□□□□ -0.48
LETMD1-237ENST00000553175 A0A0G2JS52 829 aa12.03□□□□□ -0.48
LETMD1-237ENST00000553175 PROX2Q3B8N5 592 aa12.03□□□□□ -0.48
LETMD1-237ENST00000553175 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
LETMD1-237ENST00000553175 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
LETMD1-237ENST00000553175 PHF14O94880 888 aa11.99□□□□□ -0.49
LETMD1-237ENST00000553175 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms