RNA–Protein interactions for RNA: ENST00000553061.1

AC078778.2-201, humanhuman

TSL 5 BASIC

Gene AC078778.2, Length 567 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078778.2-201ENST00000553061 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
AC078778.2-201ENST00000553061 IFT140Q96RY7 1462 aa12.52□□□□□ -0.41
AC078778.2-201ENST00000553061 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
AC078778.2-201ENST00000553061 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
AC078778.2-201ENST00000553061 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
AC078778.2-201ENST00000553061 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
AC078778.2-201ENST00000553061 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
AC078778.2-201ENST00000553061 PCDH10Q9P2E7 1040 aa12.48□□□□□ -0.41
AC078778.2-201ENST00000553061 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
AC078778.2-201ENST00000553061 CHD1O14646 1710 aa12.45□□□□□ -0.42
AC078778.2-201ENST00000553061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■□□□□ 11.3
AC078778.2-201ENST00000553061 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
AC078778.2-201ENST00000553061 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
AC078778.2-201ENST00000553061 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
AC078778.2-201ENST00000553061 PRDM2Q13029 1718 aa12.41□□□□□ -0.42
AC078778.2-201ENST00000553061 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
AC078778.2-201ENST00000553061 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.432e-7■■■■■ 27.6
AC078778.2-201ENST00000553061 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
AC078778.2-201ENST00000553061 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
AC078778.2-201ENST00000553061 ST18O60284 1047 aa12.38□□□□□ -0.43
AC078778.2-201ENST00000553061 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
AC078778.2-201ENST00000553061 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
AC078778.2-201ENST00000553061 DPY19L2Q6NUT2 758 aa12.33□□□□□ -0.44
AC078778.2-201ENST00000553061 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
AC078778.2-201ENST00000553061 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
AC078778.2-201ENST00000553061 SNPHO15079 494 aa12.31□□□□□ -0.44
AC078778.2-201ENST00000553061 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
AC078778.2-201ENST00000553061 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
AC078778.2-201ENST00000553061 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
AC078778.2-201ENST00000553061 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
AC078778.2-201ENST00000553061 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
AC078778.2-201ENST00000553061 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
AC078778.2-201ENST00000553061 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.45
AC078778.2-201ENST00000553061 BOLA1Q9Y3E2 137 aa12.26□□□□□ -0.45
AC078778.2-201ENST00000553061 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
AC078778.2-201ENST00000553061 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
AC078778.2-201ENST00000553061 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
AC078778.2-201ENST00000553061 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
AC078778.2-201ENST00000553061 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
AC078778.2-201ENST00000553061 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
AC078778.2-201ENST00000553061 RAD54L2Q9Y4B4 1467 aa12.22□□□□□ -0.45
AC078778.2-201ENST00000553061 SOGA1O94964 1423 aa12.22□□□□□ -0.45
AC078778.2-201ENST00000553061 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
AC078778.2-201ENST00000553061 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
AC078778.2-201ENST00000553061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
AC078778.2-201ENST00000553061 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
AC078778.2-201ENST00000553061 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
AC078778.2-201ENST00000553061 G3V3G9 751 aa12.17□□□□□ -0.46
AC078778.2-201ENST00000553061 SOX12O15370 315 aa12.17□□□□□ -0.46
AC078778.2-201ENST00000553061 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
AC078778.2-201ENST00000553061 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
AC078778.2-201ENST00000553061 GRIN2BQ13224 1484 aa12.14□□□□□ -0.47
AC078778.2-201ENST00000553061 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
AC078778.2-201ENST00000553061 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
AC078778.2-201ENST00000553061 HOXB3P14651 431 aaPredicted RBP12.11□□□□□ -0.47
AC078778.2-201ENST00000553061 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
AC078778.2-201ENST00000553061 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
AC078778.2-201ENST00000553061 PHF8Q9UPP1 1060 aa12.1□□□□□ -0.47
AC078778.2-201ENST00000553061 EMP3P54852 163 aa12.08□□□□□ -0.48
AC078778.2-201ENST00000553061 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
AC078778.2-201ENST00000553061 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
AC078778.2-201ENST00000553061 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
AC078778.2-201ENST00000553061 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
AC078778.2-201ENST00000553061 PKD2Q13563 968 aa12.05□□□□□ -0.48
AC078778.2-201ENST00000553061 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
AC078778.2-201ENST00000553061 KIF13AQ9H1H9 1805 aa12.04□□□□□ -0.48
AC078778.2-201ENST00000553061 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
AC078778.2-201ENST00000553061 KDM4FA0A1W2PPD8 638 aa12.04□□□□□ -0.48
AC078778.2-201ENST00000553061 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
AC078778.2-201ENST00000553061 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
AC078778.2-201ENST00000553061 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
AC078778.2-201ENST00000553061 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
AC078778.2-201ENST00000553061 NLRP6P59044 892 aa12.01□□□□□ -0.49
AC078778.2-201ENST00000553061 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
AC078778.2-201ENST00000553061 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
AC078778.2-201ENST00000553061 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
AC078778.2-201ENST00000553061 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
AC078778.2-201ENST00000553061 CUX1P39880 1505 aa12□□□□□ -0.49
AC078778.2-201ENST00000553061 CEP170Q5SW79 1584 aa11.99□□□□□ -0.49
AC078778.2-201ENST00000553061 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
AC078778.2-201ENST00000553061 RGL2O15211 777 aa11.98□□□□□ -0.49
AC078778.2-201ENST00000553061 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
AC078778.2-201ENST00000553061 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
AC078778.2-201ENST00000553061 STK25O00506 426 aa11.97□□□□□ -0.49
AC078778.2-201ENST00000553061 SPNS2Q8IVW8 549 aa11.97□□□□□ -0.49
AC078778.2-201ENST00000553061 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
AC078778.2-201ENST00000553061 KRTAP3-3Q9BYR6 98 aa11.95□□□□□ -0.5
AC078778.2-201ENST00000553061 KRTAP3-2Q9BYR7 98 aa11.95□□□□□ -0.5
AC078778.2-201ENST00000553061 KDM6BO15054 1643 aa11.93□□□□□ -0.5
AC078778.2-201ENST00000553061 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
AC078778.2-201ENST00000553061 NUP160Q12769 1436 aa11.93□□□□□ -0.5
AC078778.2-201ENST00000553061 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
AC078778.2-201ENST00000553061 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
AC078778.2-201ENST00000553061 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
AC078778.2-201ENST00000553061 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
AC078778.2-201ENST00000553061 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
AC078778.2-201ENST00000553061 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
AC078778.2-201ENST00000553061 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
AC078778.2-201ENST00000553061 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.5
AC078778.2-201ENST00000553061 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms