RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
LETMD1-235ENST00000552739 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.16
LETMD1-235ENST00000552739 ARHGAP5Q13017 1502 aa22.26■■□□□ 1.15
LETMD1-235ENST00000552739 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
LETMD1-235ENST00000552739 DENND4BO75064 1496 aaPredicted RBP22.24■■□□□ 1.15
LETMD1-235ENST00000552739 ADGRL1O94910 1474 aa22.24■■□□□ 1.15
LETMD1-235ENST00000552739 ZMYM4Q5VZL5 1548 aa22.22■■□□□ 1.15
LETMD1-235ENST00000552739 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
LETMD1-235ENST00000552739 RAPGEF3O95398 923 aa22.2■■□□□ 1.14
LETMD1-235ENST00000552739 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
LETMD1-235ENST00000552739 POGZQ7Z3K3 1410 aa22.19■■□□□ 1.14
LETMD1-235ENST00000552739 ARHGEF40Q8TER5 1519 aa22.18■■□□□ 1.14
LETMD1-235ENST00000552739 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
LETMD1-235ENST00000552739 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
LETMD1-235ENST00000552739 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
LETMD1-235ENST00000552739 ABCC1P33527 1531 aa22.17■■□□□ 1.14
LETMD1-235ENST00000552739 MAP3K1Q13233 1512 aa22.17■■□□□ 1.14
LETMD1-235ENST00000552739 GPATCH8Q9UKJ3 1502 aaKnown RBP22.16■■□□□ 1.14
LETMD1-235ENST00000552739 KDM5CP41229 1560 aa22.13■■□□□ 1.13
LETMD1-235ENST00000552739 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
LETMD1-235ENST00000552739 ZNF518AQ6AHZ1 1483 aa22.11■■□□□ 1.13
LETMD1-235ENST00000552739 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
LETMD1-235ENST00000552739 ZFYVE16Q7Z3T8 1539 aa22.11■■□□□ 1.13
LETMD1-235ENST00000552739 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
LETMD1-235ENST00000552739 CCNB3Q8WWL7 1395 aa22.1■■□□□ 1.13
LETMD1-235ENST00000552739 NCOA2Q15596 1464 aa22.09■■□□□ 1.13
LETMD1-235ENST00000552739 ARHGEF12Q9NZN5 1544 aa22.09■■□□□ 1.13
LETMD1-235ENST00000552739 HECW2Q9P2P5 1572 aa22.07■■□□□ 1.12
LETMD1-235ENST00000552739 KDM4FA0A1W2PPD8 638 aa22.07■■□□□ 1.12
LETMD1-235ENST00000552739 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
LETMD1-235ENST00000552739 YEATS2Q9ULM3 1422 aa22.05■■□□□ 1.12
LETMD1-235ENST00000552739 SIGLEC1Q9BZZ2 1709 aa22.04■■□□□ 1.12
LETMD1-235ENST00000552739 PLEKHH2Q8IVE3 1493 aa22.03■■□□□ 1.12
LETMD1-235ENST00000552739 TRAPPC8Q9Y2L5 1435 aa22.02■■□□□ 1.12
LETMD1-235ENST00000552739 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
LETMD1-235ENST00000552739 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
LETMD1-235ENST00000552739 BCORL1Q5H9F3 1711 aa22.01■■□□□ 1.11
LETMD1-235ENST00000552739 MLH3Q9UHC1 1453 aa22■■□□□ 1.11
LETMD1-235ENST00000552739 ABCA6Q8N139 1617 aa22■■□□□ 1.11
LETMD1-235ENST00000552739 KIAA1107Q9UPP5 1409 aa22■■□□□ 1.11
LETMD1-235ENST00000552739 DIP2CQ9Y2E4 1556 aa22■■□□□ 1.11
LETMD1-235ENST00000552739 ADAMTSL3P82987 1691 aa21.99■■□□□ 1.11
LETMD1-235ENST00000552739 KIDINS220Q9ULH0 1771 aa21.99■■□□□ 1.11
LETMD1-235ENST00000552739 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
LETMD1-235ENST00000552739 AFAP1Q8N556 730 aa21.98■■□□□ 1.11
LETMD1-235ENST00000552739 ZNF777Q9ULD5 760 aaPredicted RBP21.98■■□□□ 1.11
LETMD1-235ENST00000552739 REREQ9P2R6 1566 aa21.96■■□□□ 1.11
LETMD1-235ENST00000552739 INO80Q9ULG1 1556 aaPredicted RBP21.96■■□□□ 1.11
LETMD1-235ENST00000552739 ATP10AO60312 1499 aa21.95■■□□□ 1.1
LETMD1-235ENST00000552739 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
LETMD1-235ENST00000552739 CAMSAP2Q08AD1 1489 aa21.95■■□□□ 1.1
LETMD1-235ENST00000552739 APLP2Q06481 763 aa21.92■■□□□ 1.1
LETMD1-235ENST00000552739 MADDQ8WXG6 1647 aa21.92■■□□□ 1.1
LETMD1-235ENST00000552739 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
LETMD1-235ENST00000552739 ATP7AQ04656 1500 aa21.91■■□□□ 1.1
LETMD1-235ENST00000552739 ZNF644Q9H582 1327 aaPredicted RBP21.91■■□□□ 1.1
LETMD1-235ENST00000552739 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
LETMD1-235ENST00000552739 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
LETMD1-235ENST00000552739 ARHGEF5Q12774 1597 aa21.88■■□□□ 1.09
LETMD1-235ENST00000552739 ARID4BQ4LE39 1312 aaPredicted RBP21.88■■□□□ 1.09
LETMD1-235ENST00000552739 MIA2Q96PC5 1412 aa21.86■■□□□ 1.09
LETMD1-235ENST00000552739 FER1L4A9Z1Z3 1794 aa21.86■■□□□ 1.09
LETMD1-235ENST00000552739 RIMS1Q86UR5 1692 aaKnown RBP21.86■■□□□ 1.09
LETMD1-235ENST00000552739 CCDC141Q6ZP82 1450 aa21.85■■□□□ 1.09
LETMD1-235ENST00000552739 SPAG9O60271 1321 aaKnown RBP21.85■■□□□ 1.09
LETMD1-235ENST00000552739 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
LETMD1-235ENST00000552739 AGLP35573 1532 aa21.84■■□□□ 1.09
LETMD1-235ENST00000552739 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
LETMD1-235ENST00000552739 PLXNC1O60486 1568 aa21.83■■□□□ 1.08
LETMD1-235ENST00000552739 PTPRMP28827 1452 aa21.81■■□□□ 1.08
LETMD1-235ENST00000552739 PTPN23Q9H3S7 1636 aa21.81■■□□□ 1.08
LETMD1-235ENST00000552739 RTEL1-TNFRSF6BF6WH68 1400 aa21.8■■□□□ 1.08
LETMD1-235ENST00000552739 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
LETMD1-235ENST00000552739 CROCC2H7BZ55 1655 aa21.78■■□□□ 1.08
LETMD1-235ENST00000552739 FGD6Q6ZV73 1430 aa21.76■■□□□ 1.07
LETMD1-235ENST00000552739 A2MP01023 1474 aa21.75■■□□□ 1.07
LETMD1-235ENST00000552739 RSPH4AQ5TD94 716 aa21.75■■□□□ 1.07
LETMD1-235ENST00000552739 TCOF1Q13428 1488 aaKnown RBP21.75■■□□□ 1.07
LETMD1-235ENST00000552739 MLECQ14165 292 aa21.72■■□□□ 1.07
LETMD1-235ENST00000552739 DNMT1P26358 1616 aaKnown RBP21.72■■□□□ 1.07
LETMD1-235ENST00000552739 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
LETMD1-235ENST00000552739 CCER1Q8TC90 406 aaPredicted RBP21.69■■□□□ 1.06
LETMD1-235ENST00000552739 MROH2AA6NES4 1674 aa21.67■■□□□ 1.06
LETMD1-235ENST00000552739 C3P01024 1663 aa21.65■■□□□ 1.06
LETMD1-235ENST00000552739 DHX29Q7Z478 1369 aaKnown RBP21.64■■□□□ 1.06
LETMD1-235ENST00000552739 TSPY4P0CV99 314 aa21.64■■□□□ 1.06
LETMD1-235ENST00000552739 TSPY10P0CW01 314 aa21.64■■□□□ 1.06
LETMD1-235ENST00000552739 ABCC5O15440 1437 aa21.64■■□□□ 1.05
LETMD1-235ENST00000552739 DAPK1P53355 1430 aa21.64■■□□□ 1.05
LETMD1-235ENST00000552739 CLTCQ00610 1675 aaKnown RBP21.62■■□□□ 1.05
LETMD1-235ENST00000552739 EIF2AK4Q9P2K8 1649 aaKnown RBP21.62■■□□□ 1.05
LETMD1-235ENST00000552739 CNTLNQ9NXG0 1405 aa21.61■■□□□ 1.05
LETMD1-235ENST00000552739 RNF17Q9BXT8 1623 aaKnown RBP21.59■■□□□ 1.05
LETMD1-235ENST00000552739 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.04
LETMD1-235ENST00000552739 DUOX2Q9NRD8 1548 aa21.57■■□□□ 1.04
LETMD1-235ENST00000552739 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
LETMD1-235ENST00000552739 LMTK3Q96Q04 1460 aa21.56■■□□□ 1.04
LETMD1-235ENST00000552739 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
LETMD1-235ENST00000552739 KDM5DQ9BY66 1539 aa21.53■■□□□ 1.04
LETMD1-235ENST00000552739 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms