RNA–Protein interactions for RNA: ENST00000552639.1

AC087897.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC087897.2, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087897.2-201ENST00000552639 SCUBE2Q9NQ36 999 aa11.34□□□□□ -0.59
AC087897.2-201ENST00000552639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.59
AC087897.2-201ENST00000552639 PDE4AP27815 886 aa11.32□□□□□ -0.6
AC087897.2-201ENST00000552639 E2F4Q16254 413 aa11.3□□□□□ -0.6
AC087897.2-201ENST00000552639 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
AC087897.2-201ENST00000552639 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
AC087897.2-201ENST00000552639 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
AC087897.2-201ENST00000552639 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
AC087897.2-201ENST00000552639 ARHGEF1Q92888 912 aaKnown RBP11.27□□□□□ -0.61
AC087897.2-201ENST00000552639 MFSD10Q14728 455 aa11.26□□□□□ -0.61
AC087897.2-201ENST00000552639 IER5LQ5T953 404 aa11.24□□□□□ -0.61
AC087897.2-201ENST00000552639 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
AC087897.2-201ENST00000552639 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
AC087897.2-201ENST00000552639 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
AC087897.2-201ENST00000552639 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
AC087897.2-201ENST00000552639 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
AC087897.2-201ENST00000552639 SEC24BO95487 1268 aa11.18□□□□□ -0.62
AC087897.2-201ENST00000552639 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
AC087897.2-201ENST00000552639 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
AC087897.2-201ENST00000552639 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
AC087897.2-201ENST00000552639 ARIH1Q9Y4X5 557 aaPredicted RBP11.17□□□□□ -0.62
AC087897.2-201ENST00000552639 CAMK2BQ13554 666 aa11.16□□□□□ -0.62
AC087897.2-201ENST00000552639 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
AC087897.2-201ENST00000552639 PLCG2P16885 1265 aa11.14□□□□□ -0.63
AC087897.2-201ENST00000552639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
AC087897.2-201ENST00000552639 PPP1R15BQ5SWA1 713 aa11.13□□□□□ -0.63
AC087897.2-201ENST00000552639 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
AC087897.2-201ENST00000552639 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
AC087897.2-201ENST00000552639 G3V3G9 751 aa11.12□□□□□ -0.63
AC087897.2-201ENST00000552639 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
AC087897.2-201ENST00000552639 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
AC087897.2-201ENST00000552639 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
AC087897.2-201ENST00000552639 SEMA3EO15041 775 aa11.1□□□□□ -0.63
AC087897.2-201ENST00000552639 ST18O60284 1047 aa11.1□□□□□ -0.63
AC087897.2-201ENST00000552639 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
AC087897.2-201ENST00000552639 FOXK1P85037 733 aa11.08□□□□□ -0.64
AC087897.2-201ENST00000552639 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
AC087897.2-201ENST00000552639 DSG2Q14126 1118 aa11.07□□□□□ -0.64
AC087897.2-201ENST00000552639 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
AC087897.2-201ENST00000552639 KIF3CO14782 793 aa11.04□□□□□ -0.64
AC087897.2-201ENST00000552639 C2orf72A6NCS6 295 aa11.02□□□□□ -0.65
AC087897.2-201ENST00000552639 PLPP6Q8IY26 295 aa11.01□□□□□ -0.65
AC087897.2-201ENST00000552639 EMILIN3Q9NT22 766 aa11.01□□□□□ -0.65
AC087897.2-201ENST00000552639 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
AC087897.2-201ENST00000552639 DPYSL4O14531 572 aa10.98□□□□□ -0.65
AC087897.2-201ENST00000552639 PDIA6Q15084 440 aa10.95□□□□□ -0.66
AC087897.2-201ENST00000552639 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
AC087897.2-201ENST00000552639 ZC3H15Q8WU90 426 aaKnown RBP10.95□□□□□ -0.66
AC087897.2-201ENST00000552639 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
AC087897.2-201ENST00000552639 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
AC087897.2-201ENST00000552639 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
AC087897.2-201ENST00000552639 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
AC087897.2-201ENST00000552639 C3orf67Q6ZVT6 689 aa10.9□□□□□ -0.66
AC087897.2-201ENST00000552639 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
AC087897.2-201ENST00000552639 OXER1Q8TDS5 423 aa10.87□□□□□ -0.67
AC087897.2-201ENST00000552639 ZMYND10O75800 440 aa10.86□□□□□ -0.67
AC087897.2-201ENST00000552639 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
AC087897.2-201ENST00000552639 UPF1Q92900 1129 aaKnown RBP eCLIP10.85□□□□□ -0.67
AC087897.2-201ENST00000552639 GPIHBP1Q8IV16 184 aa10.84□□□□□ -0.67
AC087897.2-201ENST00000552639 TBC1D12O60347 775 aa10.83□□□□□ -0.68
AC087897.2-201ENST00000552639 BARGINQ6ZT62 677 aa10.81□□□□□ -0.68
AC087897.2-201ENST00000552639 PTCD2Q8WV60 388 aaKnown RBP10.81□□□□□ -0.68
AC087897.2-201ENST00000552639 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.81□□□□□ -0.68
AC087897.2-201ENST00000552639 SLC34A2O95436 690 aa10.8□□□□□ -0.68
AC087897.2-201ENST00000552639 PTGER2P43116 358 aa10.8□□□□□ -0.68
AC087897.2-201ENST00000552639 SLC24A3Q9HC58 644 aa10.8□□□□□ -0.68
AC087897.2-201ENST00000552639 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
AC087897.2-201ENST00000552639 POTEB3A0JP26 581 aa10.77□□□□□ -0.69
AC087897.2-201ENST00000552639 SNPHO15079 494 aa10.77□□□□□ -0.69
AC087897.2-201ENST00000552639 EVI5O60447 810 aa10.77□□□□□ -0.69
AC087897.2-201ENST00000552639 POTEBQ6S5H4 581 aa10.77□□□□□ -0.69
AC087897.2-201ENST00000552639 ZNF316A6NFI3 1004 aaPredicted RBP10.76□□□□□ -0.69
AC087897.2-201ENST00000552639 OSBPP22059 807 aa10.74□□□□□ -0.69
AC087897.2-201ENST00000552639 BRPF1P55201 1214 aaPredicted RBP10.73□□□□□ -0.69
AC087897.2-201ENST00000552639 DDX12PQ92771 950 aa10.73□□□□□ -0.69
AC087897.2-201ENST00000552639 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
AC087897.2-201ENST00000552639 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
AC087897.2-201ENST00000552639 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
AC087897.2-201ENST00000552639 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
AC087897.2-201ENST00000552639 TMEM132AQ24JP5 1023 aa10.71□□□□□ -0.69
AC087897.2-201ENST00000552639 AK7Q96M32 723 aa10.71□□□□□ -0.69
AC087897.2-201ENST00000552639 NUTM2FA1L443 756 aa10.7□□□□□ -0.7
AC087897.2-201ENST00000552639 GPR37O15354 613 aa10.7□□□□□ -0.7
AC087897.2-201ENST00000552639 EMP3P54852 163 aa10.69□□□□□ -0.7
AC087897.2-201ENST00000552639 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
AC087897.2-201ENST00000552639 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
AC087897.2-201ENST00000552639 PCDHGA4Q9Y5G9 962 aa10.68□□□□□ -0.7
AC087897.2-201ENST00000552639 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
AC087897.2-201ENST00000552639 PHF14O94880 888 aa10.65□□□□□ -0.7
AC087897.2-201ENST00000552639 EPAS1Q99814 870 aa10.65□□□□□ -0.7
AC087897.2-201ENST00000552639 FCHSD2O94868 740 aa10.64□□□□□ -0.71
AC087897.2-201ENST00000552639 HIC1Q14526 733 aa10.64□□□□□ -0.71
AC087897.2-201ENST00000552639 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
AC087897.2-201ENST00000552639 GNPATO15228 680 aa10.63□□□□□ -0.71
AC087897.2-201ENST00000552639 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
AC087897.2-201ENST00000552639 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
AC087897.2-201ENST00000552639 TRIM66O15016 1216 aa10.61□□□□□ -0.71
AC087897.2-201ENST00000552639 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
AC087897.2-201ENST00000552639 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
AC087897.2-201ENST00000552639 PTGDRQ13258 359 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms