RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 PHLDB1Q86UU1 1377 aa17.26■□□□□ 0.35
CNOT2-239ENST00000552483 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
CNOT2-239ENST00000552483 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
CNOT2-239ENST00000552483 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
CNOT2-239ENST00000552483 RAPGEF3O95398 923 aa17.24■□□□□ 0.35
CNOT2-239ENST00000552483 ADGRL1O94910 1474 aa17.24■□□□□ 0.35
CNOT2-239ENST00000552483 LRRC9Q6ZRR7 1453 aa17.24■□□□□ 0.35
CNOT2-239ENST00000552483 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
CNOT2-239ENST00000552483 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
CNOT2-239ENST00000552483 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
CNOT2-239ENST00000552483 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
CNOT2-239ENST00000552483 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
CNOT2-239ENST00000552483 ABCC1P33527 1531 aa17.21■□□□□ 0.34
CNOT2-239ENST00000552483 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.34
CNOT2-239ENST00000552483 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.34
CNOT2-239ENST00000552483 EFCAB2Q5VUJ9 269 aa17.2■□□□□ 0.34
CNOT2-239ENST00000552483 ZMYM4Q5VZL5 1548 aa17.19■□□□□ 0.34
CNOT2-239ENST00000552483 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
CNOT2-239ENST00000552483 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
CNOT2-239ENST00000552483 ARHGEF40Q8TER5 1519 aa17.16■□□□□ 0.34
CNOT2-239ENST00000552483 SIGLEC1Q9BZZ2 1709 aa17.15■□□□□ 0.34
CNOT2-239ENST00000552483 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
CNOT2-239ENST00000552483 KDM5CP41229 1560 aa17.15■□□□□ 0.34
CNOT2-239ENST00000552483 TRAPPC8Q9Y2L5 1435 aa17.14■□□□□ 0.33
CNOT2-239ENST00000552483 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
CNOT2-239ENST00000552483 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
CNOT2-239ENST00000552483 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
CNOT2-239ENST00000552483 CFDP1Q9UEE9 299 aaPredicted RBP17.11■□□□□ 0.33
CNOT2-239ENST00000552483 ZNF518AQ6AHZ1 1483 aa17.11■□□□□ 0.33
CNOT2-239ENST00000552483 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
CNOT2-239ENST00000552483 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
CNOT2-239ENST00000552483 AFAP1Q8N556 730 aa17.09■□□□□ 0.33
CNOT2-239ENST00000552483 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
CNOT2-239ENST00000552483 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
CNOT2-239ENST00000552483 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.32
CNOT2-239ENST00000552483 APLP2Q06481 763 aa17.07■□□□□ 0.32
CNOT2-239ENST00000552483 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
CNOT2-239ENST00000552483 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
CNOT2-239ENST00000552483 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
CNOT2-239ENST00000552483 KDM4FA0A1W2PPD8 638 aa17.06■□□□□ 0.32
CNOT2-239ENST00000552483 HNRNPMP52272 730 aaKnown RBP eCLIP17.06■□□□□ 0.321e-8■■■■□ 24.2
CNOT2-239ENST00000552483 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
CNOT2-239ENST00000552483 MBD5Q9P267 1494 aa17.05■□□□□ 0.32
CNOT2-239ENST00000552483 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
CNOT2-239ENST00000552483 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
CNOT2-239ENST00000552483 MLH3Q9UHC1 1453 aa17.04■□□□□ 0.32
CNOT2-239ENST00000552483 BCORL1Q5H9F3 1711 aa17.02■□□□□ 0.32
CNOT2-239ENST00000552483 ATP7AQ04656 1500 aa17.01■□□□□ 0.31
CNOT2-239ENST00000552483 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
CNOT2-239ENST00000552483 ATP10AO60312 1499 aa17■□□□□ 0.31
CNOT2-239ENST00000552483 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
CNOT2-239ENST00000552483 ARHGEF5Q12774 1597 aa16.99■□□□□ 0.31
CNOT2-239ENST00000552483 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
CNOT2-239ENST00000552483 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
CNOT2-239ENST00000552483 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
CNOT2-239ENST00000552483 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
CNOT2-239ENST00000552483 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
CNOT2-239ENST00000552483 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
CNOT2-239ENST00000552483 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
CNOT2-239ENST00000552483 MADDQ8WXG6 1647 aa16.96■□□□□ 0.31
CNOT2-239ENST00000552483 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
CNOT2-239ENST00000552483 TCOF1Q13428 1488 aaKnown RBP16.95■□□□□ 0.3
CNOT2-239ENST00000552483 MYT1LQ9UL68 1186 aa16.95■□□□□ 0.3
CNOT2-239ENST00000552483 CROCC2H7BZ55 1655 aa16.94■□□□□ 0.3
CNOT2-239ENST00000552483 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
CNOT2-239ENST00000552483 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
CNOT2-239ENST00000552483 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
CNOT2-239ENST00000552483 MAST1Q9Y2H9 1570 aa16.92■□□□□ 0.3
CNOT2-239ENST00000552483 FER1L4A9Z1Z3 1794 aa16.91■□□□□ 0.3
CNOT2-239ENST00000552483 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
CNOT2-239ENST00000552483 AGLP35573 1532 aa16.91■□□□□ 0.3
CNOT2-239ENST00000552483 RTEL1-TNFRSF6BF6WH68 1400 aa16.9■□□□□ 0.3
CNOT2-239ENST00000552483 ABCC5O15440 1437 aa16.88■□□□□ 0.29
CNOT2-239ENST00000552483 A2MP01023 1474 aa16.88■□□□□ 0.29
CNOT2-239ENST00000552483 MLECQ14165 292 aa16.88■□□□□ 0.29
CNOT2-239ENST00000552483 DAPK1P53355 1430 aa16.87■□□□□ 0.29
CNOT2-239ENST00000552483 RSPH4AQ5TD94 716 aa16.85■□□□□ 0.29
CNOT2-239ENST00000552483 PTPRMP28827 1452 aa16.85■□□□□ 0.29
CNOT2-239ENST00000552483 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
CNOT2-239ENST00000552483 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
CNOT2-239ENST00000552483 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
CNOT2-239ENST00000552483 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
CNOT2-239ENST00000552483 FAM50AQ14320 339 aaKnown RBP16.8■□□□□ 0.28
CNOT2-239ENST00000552483 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
CNOT2-239ENST00000552483 CLTCQ00610 1675 aaKnown RBP16.78■□□□□ 0.28
CNOT2-239ENST00000552483 C3P01024 1663 aa16.77■□□□□ 0.28
CNOT2-239ENST00000552483 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
CNOT2-239ENST00000552483 ADGRL2O95490 1459 aa16.75■□□□□ 0.27
CNOT2-239ENST00000552483 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
CNOT2-239ENST00000552483 RNF17Q9BXT8 1623 aaKnown RBP16.75■□□□□ 0.27
CNOT2-239ENST00000552483 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
CNOT2-239ENST00000552483 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
CNOT2-239ENST00000552483 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
CNOT2-239ENST00000552483 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
CNOT2-239ENST00000552483 MROH2AA6NES4 1674 aa16.74■□□□□ 0.27
CNOT2-239ENST00000552483 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
CNOT2-239ENST00000552483 KIF3BO15066 747 aa16.72■□□□□ 0.27
CNOT2-239ENST00000552483 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
CNOT2-239ENST00000552483 GGT6Q6P531 493 aa16.72■□□□□ 0.27
CNOT2-239ENST00000552483 NCOA1Q15788 1441 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms